prot_P-lacustris_contig909.15544.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig909.15544.1
Unique Name	prot_P-lacustris_contig909.15544.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	243

Homology

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BLAST of mRNA_P-lacustris_contig909.15544.1 vs. uniprot
Match: D7FYB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB0_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.360e-64
Identity = 137/208 (65.87%), Postives = 157/208 (75.48%), Query Frame = 0

Query:   32 QAGGGEGSIKSLYHSLQTSMELVAMGEKHASANAMTIADMSEWMSSLEQKQLIKISQDDRMDGTTMADVILAEGLAVGDWIRDYSDQTSSAFKRLASIFKTASTETERATKELVVRLTELGEGDETSDSKGGVEERVCAVAVPAGPEVAAAVGKGPPVEFLIKAKNVERTKLLQEKRLEQATKNNEEAQGVIDQLGASLQRMEQRHRQ 239
            QAGGGEGSIK+L+ SL  SMELVA GEKHASAN  TIADMSEW+S LEQKQLI ISQ++ M+GTTMA VIL EGLAVGD IRDYSDQTSSAFKRLASIFKTA  ETERATKELV RLTE    +E +  K G         V AG E  +  G  P  E +IKAK VER K++QEK+L++A K NEEAQ VI+QL  SL+++EQR +Q
Sbjct:  245 QAGGGEGSIKNLHESLHLSMELVATGEKHASANTTTIADMSEWLSHLEQKQLINISQEEAMEGTTMAGVILDEGLAVGDCIRDYSDQTSSAFKRLASIFKTACAETERATKELVARLTEDPTAEEGAGPKEGGGGGTW---VGAGKEAGSTAGNVPSAESVIKAKKVERIKIMQEKQLQEAAKTNEEAQEVINQLKVSLRQLEQRFKQ 449

[Close]

BLAST of mRNA_P-lacustris_contig909.15544.1 vs. uniprot
Match: A0A6H5L679_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L679_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 7.560e-53
Identity = 126/234 (53.85%), Postives = 145/234 (61.97%), Query Frame = 0

Query:   20 QEEKTYSGEMASQAGGGEGSIKSLYHSLQTSMELVAMGEKHASANAMTIADMSEWMSSLEQKQLIKISQDDRMDGTTMADVILAEGLAVGDWIRDY---------------------------SDQTSSAFKRLASIFKTASTETERATKELVVRLTELGEGDETSDSKGGVEERVCAVAVPAGPEVAAAVGKGPPVEFLIKAKNVERTKLLQEKRLEQATKNNEEAQGVIDQL 226
            ++   + G   +QAGGGEGSIK+L+ SL  SMELVA GEKHASAN  TIADMSEW+S LE+KQLI ISQ++ M+GTTMA VIL EGLAVGD IRDY                           SDQTSSAFKRLASIFKTA  ETERATKELV RLTE   GDE +  K G               +A   G     E +IKA+ V+R K++QE     A K NEEAQGVI+QL
Sbjct:  250 KKRNNHRGGAVNQAGGGEGSIKNLHESLLLSMELVATGEKHASANTTTIADMSEWLSHLERKQLINISQEEAMEGTTMAGVILDEGLAVGDCIRDYRSSGPIGLVERHLTNLEISVKQHPVTRSDQTSSAFKRLASIFKTACAETERATKELVARLTEDPTGDEGAGPKEGGXXXTXXXXXXXXXSIA---GNVQSAESVIKAQKVQRIKIMQE-----AAKTNEEAQGVINQL 475

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig909.15544.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig909.15544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FYB0_ECTSI	1.360e-64	65.87	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L679_9PHAE	7.560e-53	53.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 195..243

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig909	contig	P-lacustris_contig909:80457..82691 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig909.15544.1	mRNA_P-lacustris_contig909.15544.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig909 80457..83841 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig909.15544.1 ID=prot_P-lacustris_contig909.15544.1|Name=mRNA_P-lacustris_contig909.15544.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=243bp
MKGVSGKGVWGRGLGRSGAQEEKTYSGEMASQAGGGEGSIKSLYHSLQTS
MELVAMGEKHASANAMTIADMSEWMSSLEQKQLIKISQDDRMDGTTMADV
ILAEGLAVGDWIRDYSDQTSSAFKRLASIFKTASTETERATKELVVRLTE
LGEGDETSDSKGGVEERVCAVAVPAGPEVAAAVGKGPPVEFLIKAKNVER
TKLLQEKRLEQATKNNEEAQGVIDQLGASLQRMEQRHRQARTT