prot_P-lacustris_contig9.15452.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig9.15452.1
Unique Nameprot_P-lacustris_contig9.15452.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length241
Homology
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BLAST of mRNA_P-lacustris_contig9.15452.1 vs. uniprot
Match: D7FLE1_ECTSI (FoP_duplication domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE1_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 3.740e-46
Identity = 145/234 (61.97%), Postives = 154/234 (65.81%), Query Frame = 0 
Query:   10 MEAKRVIVKPVTNIGAVQRRGEIDSRRKIGRQTQIDARRAGIVDTKPAMRAAQSKVISPRQPPPQQXXXXXXXXXXXXXVQAGGGR---PGGMPLRNNLQKTTGRGGAGXXXXXXXXXXXXXXXXXRGNNITAGGRXXXXXXXXXXXXXXXNFNKASTKPEKEKDLDEGLDEYWFKAGKGPDPKVASXXXXXXXXXXSAAGKASGDAAAGDKMEDTDAPEPVVGAPVAGVDPDL 240
            MEA R IVKPV N G  QRR E+DSRRK+GRQ Q+D+RR G+ + KPAMRAAQSKV+SPRQ   Q               QAGGGR    GGMP+RNN           XXXXXXXXX                  XXXXXXXXXXXXXXX          KE DLDEGLDEYWFKAGKGPDPKVASXXXXXXXXXX    K +GDAAAGDKMEDTDAP PVV APVAGVDPDL
Sbjct:    1 MEANRAIVKPVFNNGISQRRSEMDSRRKVGRQIQVDSRRQGVANAKPAMRAAQSKVVSPRQ---QTAPQRVQGRGRGRSTQAGGGRNQRSGGMPVRNNXXXXX----XXXXXXXXXXXASSGRGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETDLDEGLDEYWFKAGKGPDPKVASXXXXXXXXXXXXTDKTNGDAAAGDKMEDTDAPAPVVVAPVAGVDPDL 227
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BLAST of mRNA_P-lacustris_contig9.15452.1 vs. uniprot
Match: A0A6H5JG09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG09_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.060e-18
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:   10 MEAKRVIVKPVTNIGAVQRRGEIDSRRKIGRQTQIDARRAGIVDTKPAMRAAQSKVISPRQ 70
            MEA RVIVKPV N G  QRRGE+DSRRK+GRQ Q D+RR G+ + KPAMRAAQSKV+SPRQ
Sbjct:    1 MEANRVIVKPVFNNGISQRRGEMDSRRKVGRQVQFDSRRQGVANAKPAMRAAQSKVVSPRQ 61
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig9.15452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLE1_ECTSI3.740e-4661.97FoP_duplication domain-containing protein n=1 Tax=... [more]
A0A6H5JG09_9PHAE4.060e-1873.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025715Chromatin target of PRMT1 protein, C-terminalSMARTSM01218FoP_duplication_2coord: 109..208
e-value: 1.8E-9
score: 47.5
IPR025715Chromatin target of PRMT1 protein, C-terminalPFAMPF13865FoP_duplicationcoord: 122..205
e-value: 6.4E-7
score: 29.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig9contigP-lacustris_contig9:148782..153101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig9.15452.1mRNA_P-lacustris_contig9.15452.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig9 148510..155232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig9.15452.1 ID=prot_P-lacustris_contig9.15452.1|Name=mRNA_P-lacustris_contig9.15452.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=241bp
MTLSDRFEQMEAKRVIVKPVTNIGAVQRRGEIDSRRKIGRQTQIDARRAG
IVDTKPAMRAAQSKVISPRQPPPQQQRTQTQGRGRGRGVQAGGGRPGGMP
LRNNLQKTTGRGGAGGAASGRGPGRGAGRTGGRGNNITAGGRGGRGGRGG
RRGGRGNNFNKASTKPEKEKDLDEGLDEYWFKAGKGPDPKVASLDRGLDN
YWSSAAGKASGDAAAGDKMEDTDAPEPVVGAPVAGVDPDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025715FoP_C