prot_P-lacustris_contig892.15390.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig892.15390.1
Unique Nameprot_P-lacustris_contig892.15390.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length68
Homology
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BLAST of mRNA_P-lacustris_contig892.15390.1 vs. uniprot
Match: D7FKB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB0_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 8.550e-12
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0 
Query:   40 VCPLLLRCFWTQQRHRRGEDYANVNSLPR 68
            VCPLLLRCFWTQ RHRRGEDY+NVNSLPR
Sbjct:   97 VCPLLLRCFWTQNRHRRGEDYSNVNSLPR 125
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BLAST of mRNA_P-lacustris_contig892.15390.1 vs. uniprot
Match: A0A6H5KD24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD24_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.870e-11
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:   40 VCPLLLRCFWTQQRHRRGEDYANVNSLPR 68
            VCPLLLRCFWTQ RH RGEDY+NVNSLPR
Sbjct:   11 VCPLLLRCFWTQNRHGRGEDYSNVNSLPR 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig892.15390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKB0_ECTSI8.550e-1293.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD24_9PHAE1.870e-1189.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010516Sin3 associated polypeptide p18PFAMPF06487SAP18coord: 38..67
e-value: 1.6E-4
score: 21.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig892contigP-lacustris_contig892:8124..8907 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig892.15390.1mRNA_P-lacustris_contig892.15390.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig892 8124..9011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig892.15390.1 ID=prot_P-lacustris_contig892.15390.1|Name=mRNA_P-lacustris_contig892.15390.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=68bp
MLLLHRLPCPPRGDVEILRGSTEAVATATRDYQPVGHYTVCPLLLRCFWT
QQRHRRGEDYANVNSLPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010516SAP18