prot_P-lacustris_contig882.15307.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig882.15307.1
Unique Nameprot_P-lacustris_contig882.15307.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length217
Homology
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BLAST of mRNA_P-lacustris_contig882.15307.1 vs. uniprot
Match: D7FQK1_ECTSI (BRISC and BRCA1-A complex member 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK1_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 3.410e-96
Identity = 146/191 (76.44%), Postives = 166/191 (86.91%), Query Frame = 0 
Query:    1 MARTKGSTVVGAVRDQIDYLKRSSRRNAWGIKVAFEEPVNDCFVQSEDIVVSVFVPYCESGAEWEVIIDGDAPERCPDLVPLPATEADVPKGFTQGMQEAYSMYRLSSLDSLKKWDLFRRPSSLADLALDIKRLRHRKCEIQKLTKSPLASAAAFHLDFLRDRQDEVEILVSRAGVRMAFPLWPDPAAAAA 191
            M RTKG+ V+ AVRDQID LKRSSR+NAWGIK + +EPV   F QSEDIVVSVF+PYCESGAEWEV+IDGDAPERCPDLVP P+TE DV +GFTQGM EAY+ YRL+SL+SLKKWDLFRRPSSLA LALDIK+LR R  EIQKL  SPLASA +FHL +LRDRQ+++E+LVSRAG R+AFPLWPDP AAAA
Sbjct:    1 MVRTKGNVVLSAVRDQIDCLKRSSRQNAWGIKASLQEPVTGGFAQSEDIVVSVFIPYCESGAEWEVVIDGDAPERCPDLVPFPSTEGDVNRGFTQGMHEAYNTYRLASLESLKKWDLFRRPSSLAALALDIKQLR-RNHEIQKLENSPLASAMSFHLGYLRDRQEDIELLVSRAGARLAFPLWPDPTAAAA 190
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig882.15307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQK1_ECTSI3.410e-9676.44BRISC and BRCA1-A complex member 2 n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig882contigP-lacustris_contig882:21176..30976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig882.15307.1mRNA_P-lacustris_contig882.15307.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig882 17364..30976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig882.15307.1 ID=prot_P-lacustris_contig882.15307.1|Name=mRNA_P-lacustris_contig882.15307.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=217bp
MARTKGSTVVGAVRDQIDYLKRSSRRNAWGIKVAFEEPVNDCFVQSEDIV
VSVFVPYCESGAEWEVIIDGDAPERCPDLVPLPATEADVPKGFTQGMQEA
YSMYRLSSLDSLKKWDLFRRPSSLADLALDIKRLRHRKCEIQKLTKSPLA
SAAAFHLDFLRDRQDEVEILVSRAGVRMAFPLWPDPAAAAAAAAEQAGPE
ATGEGGTGARSGGRWR*
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