prot_P-lacustris_contig1004.146.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1004.146.1
Unique Nameprot_P-lacustris_contig1004.146.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length257
Homology
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BLAST of mRNA_P-lacustris_contig1004.146.1 vs. uniprot
Match: A0A6H5L5N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N2_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 1.210e-108
Identity = 165/217 (76.04%), Postives = 191/217 (88.02%), Query Frame = 0 
Query:   21 MSEGLATAFQCFQDGMGGKLASLAQEQSVLLAQLEALREALPVSSIGRSQDRGGRTQTDLDIEFIGKVMSQAPWYTQRVKAIAQKKASLAARVENLQRRSAGLRESLPVPLQRKLAERFEATSLAPFRETKDIAFVTCYQGGVAIRTAPSLNSPCVGEILQWNEA---FWASERLGRLGEETIYVKLRDGRGWVFETLNGTKVLERVALSSMKDMEN 234
            M+EGLATAFQCFQDGMG KL SLAQ+QS LL++LEA REALPVSS GR++DR GR + + D+EFI K+MSQAP Y QRV+A+AQ+KASL AR+ NLQRRS GLRESLPVP+QR LAER EA+ +APFRE  D+AFVTCYQGGVAIRTAPSL++PC G+ILQWNEA   FWASERLGRLGE+ IYVKLRDGRGWVFETL+G KVLERVALSSM+D+E+
Sbjct:    1 MAEGLATAFQCFQDGMGEKLISLAQQQSALLSKLEASREALPVSSTGRTRDRSGRAEYNEDVEFIAKIMSQAPSYAQRVRALAQQKASLDARMVNLQRRSTGLRESLPVPMQRHLAERLEASCMAPFREQTDMAFVTCYQGGVAIRTAPSLDAPCAGDILQWNEASGVFWASERLGRLGEDMIYVKLRDGRGWVFETLHGKKVLERVALSSMEDIED 217
[Close]
BLAST of mRNA_P-lacustris_contig1004.146.1 vs. uniprot
Match: A0A7S4D8H9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8H9_HETAK)

HSP 1 Score: 66.2 bits (160), Expect = 4.000e-9
Identity = 37/153 (24.18%), Postives = 74/153 (48.37%), Query Frame = 0 
Query:   79 DLDIEFIGKVMSQAPWYTQRVKAIAQKKASLAARVENLQRRSAGLRESLPVPLQRKLAERFEATSLAPFRETKDIAFVTCYQGGVAIRTAPSLNSPCVGEILQWNEAFWASERLGRLGEETIYVKLRDGRGWVFETLNGTKVLERVALSSMKD 231
            D +   + ++M++ P Y ++++ I Q    +   V+ L+RR A + +              +   + PF+E  +  +   + GGV +R+ PSL +   G +L  +      ER+  +G++T+Y+++ +G+GWVFE       L R+      D
Sbjct:   88 DKEYVKVSRIMAKLPAYIEKLRMIRQHGKHINTEVQTLKRRVAQMAK--------------DYRGVDPFQEIGEFFYQVTHPGGVLVRSEPSLAAAPTGTLLPQHTILKVLERVRIIGDDTVYLRIAEGQGWVFEAKKDRVALSRITARMAAD 226
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1004.146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5N2_9PHAE1.210e-10876.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4D8H9_HETAK4.000e-924.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
NoneNo IPR availableCOILSCoilCoilcoord: 99..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1004contigP-lacustris_contig1004:25654..27778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1004.146.1mRNA_P-lacustris_contig1004.146.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1004 25153..29954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1004.146.1 ID=prot_P-lacustris_contig1004.146.1|Name=mRNA_P-lacustris_contig1004.146.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=257bp
MTSFARSAEREGDDNAENEAMSEGLATAFQCFQDGMGGKLASLAQEQSVL
LAQLEALREALPVSSIGRSQDRGGRTQTDLDIEFIGKVMSQAPWYTQRVK
AIAQKKASLAARVENLQRRSAGLRESLPVPLQRKLAERFEATSLAPFRET
KDIAFVTCYQGGVAIRTAPSLNSPCVGEILQWNEAFWASERLGRLGEETI
YVKLRDGRGWVFETLNGTKVLERVALSSMKDMENVAHVQPRVASPGAGSD
ASEGKG*
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