mRNA_P-lacustris_contig115.1155.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: D8LPQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ3_ECTSI) HSP 1 Score: 619 bits (1597), Expect = 6.620e-208 Identity = 313/441 (70.98%), Postives = 356/441 (80.73%), Query Frame = 3
Query: 210 DQATGNITVINSSRVPIPTGELNTIKGYAYGTDPSNPGQLKVHLGQVPVDGDYWVVGLGPDTFGPESLYQWAIVSGPAAESLFVLVRDVSEFEKTYARDVLDLVVELGFTGRAKEPQRVVQEGCLPFTPSTRSTFDSTIVAGGPKQKLGWMDVLETMK-LD-DEAEVAYTGEEDVSGEGTWTDFLSGVQWDERTGTWSSEWWKPVKPVTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDTGTGKYPWAIVSDPLRAFLFVLVRDPTQDNTDLLAKTEQLGFTAPWNRARKTVQEGCTYT--TPTVATSDEKAE---GDALSSVPKLRGGA--LGFGFPLHASCEMTFVFANNECSEVSTAIVSSAEGMKGFENC 1505
DQATGNITVINS R+ +PTG L TI+G+AYGT PSNPGQLKVHLG VPVDGDYWVVGLGPDTFGP+SLYQWA+VSGP AESLFVLVRDV EFEKTYARDVL+ V ELGFTGR KEPQRV+QEGCLPFTPS+ DST A K+KL W+DVLET++ LD D+ Y +EDV+ +WTD LS +QWDE GTWS E WKPV+PVT+LDI+RYSGRWYQSYASFTAGTLLE+QGACVTADYGVK DGS+SV NTAR DGELVEMTG+A+ D SKPG+L+VHLDG+P + PYWVLAVG++ GTG YPWAIVSDP RAFLFVLVRD Q++TDL+AK +LGFTAPWN RKTVQEGCTYT +P +++ AE AL S +LRGGA LG G PLHASC+MT F N CSEV+ AIVSSA+ M GFENC
Sbjct: 58 DQATGNITVINSERIGVPTGRLQTIEGFAYGTGPSNPGQLKVHLGDVPVDGDYWVVGLGPDTFGPDSLYQWALVSGPDAESLFVLVRDVREFEKTYARDVLEFVAELGFTGRDKEPQRVIQEGCLPFTPSS----DSTTTANTRKKKLDWVDVLETLETLDWDKVGAGYASDEDVNAGSSWTDVLSQMQWDEEEGTWSLESWKPVEPVTELDINRYSGRWYQSYASFTAGTLLERQGACVTADYGVKADGSLSVVNTARTNSPDGELVEMTGHAYTKDASKPGQLTVHLDGLPVDGPYWVLAVGDEQGTGSYPWAIVSDPFRAFLFVLVRDTAQEDTDLVAKCRELGFTAPWNSPRKTVQEGCTYTEVSPAEDVAEDVAEEGGSAALLSALELRGGASGLGLGGPLHASCKMTIAFPKNSCSEVAEAIVSSAKDMMGFENC 494
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: A0A8B7YCF9_ACAPL (uncharacterized protein LOC110978570 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YCF9_ACAPL) HSP 1 Score: 172 bits (436), Expect = 7.530e-43 Identity = 125/368 (33.97%), Postives = 181/368 (49.18%), Query Frame = 3
Query: 228 ITVINSSRVPIPTGELNTIKGYAYGTDPSNPGQLKVHLGQVPVDGDYWVVGLGPDTFGPESLYQWAIVSGPAAESLFVLVRDVSEFEKTYARDVLDLVVELGFTGRAKEPQRVVQEGCLPFTPSTRSTFDSTIVAGGPKQKLGWMDVLETMKLDDEAEVAYTGEEDVSGEGTWTDF-LSGVQWDERTGTWSSEWWKPVKPVTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDTGTGK-----YPWAIVSDPLRAFLFVLVRDP----TQDNTDLLAKTEQLGFTAPWNRARKTVQ-EGCTY 1298
++V N+ R P G+ I G+AY DPS PG+LKV L VP GDY ++ LGP G YQ+A+V+ +L+VL R+ F YA +VL + + G+ G K+P LP +T G P+ GW L + L D YT + V L+G TG + ++ P K V++LD+ Y GRWYQ +A + E+ CVTADYG+ + +ISV N G + GYA++ + ++PG+L V P PYWV+ +G T + Y ++IVSDP+RA LFVL RDP ++ D+L + F +N+ +TVQ E C Y
Sbjct: 67 VSVYNAGREGWPEGKRRDIAGFAYIPDPSQPGRLKVVLDGVPTAGDYLIIKLGPIIDGQ---YQYAVVTSSGDRALYVLARNPISFLDKYAEEVLKFLDDNGYRGFLKKP--------LPLLQATN--------CGYPESSGGW---LTSCVLSDTEYKLYTARKMVKIFSAVVALCLAG------TGLGAPAYFSPPKTVSELDVQSYLGRWYQMFADLVVVSTFERNADCVTADYGLNPNNTISVYNANTDGSPTGPRKAIKGYAYVPNKNEPGQLLVKFPVNPIPGPYWVIQLGPKETTWRNAQPQYQYSIVSDPMRAGLFVLARDPADFRSRFQADVLQWLKVNQFDHFYNKPIETVQTEACKY 406
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: UPI0018DA05B6 (uncharacterized protein LOC119736785 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA05B6) HSP 1 Score: 155 bits (393), Expect = 2.260e-37 Identity = 117/373 (31.37%), Postives = 167/373 (44.77%), Query Frame = 3
Query: 228 ITVINSSRVPIPTGELNTIKGYAYGTDPSNPGQLKVHLGQVPVDGDYWVVGLGPDTFGPESLYQWAIVSGPAAESLFVLVRDVSEFEKTYARDVLDLVVELGFTGRAKEPQRVVQEGCLPFTPSTRSTFDSTIVA------GGPKQKLGWMDVLETMKLDDEAEVAYTGEEDVSGEGTWTDFLSGVQWDERTGTWSSEWWKPVKPVTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDTGTGK-----YPWAIVSDPLRAFLFVLVRDP----TQDNTDLLAKTEQLGFTAPWNRARKTVQ-EGCTY 1298
++V N+ R P G+ I G+AY DPS PG+LKV L VP GDY ++ +GP G YQ+A+V+ +L+VL R+ F YA +VL + E G+ G K+PQ ++Q + P TR D A GP A Y P K V +LD++ Y GRWYQ +A + E+ CVTADY + + +ISV N G + GYA++ D S+PG+L V P YWV+ +G T + Y ++IV+D LRA LFVL RDP ++ D+L + F +N+ +TVQ + C Y
Sbjct: 67 VSVYNAGREGWPEGKRRDIAGFAYIPDPSKPGRLKVVLEGVPAAGDYLIIKIGPIIDGQ---YQYAVVTSSGDRALYVLARNPISFLDKYAEEVLKFLDENGYQGFLKKPQPLLQATNCGY-PETREIMDVLFAAVLALCLAGPSL----------------AAPGYAS--------------------------------PPKTVGELDLNSYLGRWYQMFADLVVDSTFERNAYCVTADYALNPNKTISVYNANTVGSPTGARNAIKGYAYVPDPSQPGQLLVKFPVTPVAGSYWVVQLGPKETTWRDSDPQYQYSIVTDSLRATLFVLARDPDDFRSRFQADVLQWLKSNQFDHFYNKPVETVQTDDCKY 387
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: A0A7I8VUX5_9ANNE (DgyrCDS8132 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VUX5_9ANNE) HSP 1 Score: 150 bits (380), Expect = 2.200e-36 Identity = 103/327 (31.50%), Postives = 151/327 (46.18%), Query Frame = 3
Query: 228 ITVINSSRVPIPTGELNTIKGYAYGTDPSNPGQLKVHLGQVPVDGDYWVVGLGPDTFGPESLYQWAIVSGPAAESLFVLVRDVSEFEKTYARDVLDLVVELGFTGRAKEPQRVVQEG-CLPFTPSTRSTFDSTIVAGGPKQKLGWMDVLETMKLDDEAEVAYTGEEDVSGEGTWTDFLSGVQWDERTGTWSSEWWKPVKPVTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDT--GTGKYPWAIVSDPLRAFLFVLVRDP 1199
I+V+NS R+ P G+ + GYAY T G LKV +P++G+YW+V LGP FG ++LY+++I++ P ++V+ RD F+K Y ++V + + + GF Q+G CL GG K +L D KP+ PV ++++ +Y GRWYQ+YAS A E+ G C TADY + + SISV N R G ++GYA+ D +PG L V IP YW++ +G G Y +AIVS+P + LFVL RDP
Sbjct: 23 ISVLNSMRLKEPKGKEVNVSGYAYPT--KRTGILKVKFKSIPIEGNYWIVKLGPQAFGEKNLYEYSIITDPTRLFMWVIARDPVTFKKKYDKEVREYLKKEGFNRFFNRFVENYQKGDCL---------------YGGEKNQL----------------------------------------DSNN--------KPIVPVNEVNLKKYIGRWYQAYASKFAIERTERNGFCCTADYKILSESSISVFNAMRIGSPTGPPSNISGYAYTTD--RPGVLKVKFYRIPYPGNYWIIKLGPKIYGSEGLYEYAIVSEPTKRNLFVLARDP 282
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: A7SH61_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SH61_NEMVE) HSP 1 Score: 138 bits (348), Expect = 1.420e-33 Identity = 72/165 (43.64%), Postives = 100/165 (60.61%), Query Frame = 3
Query: 816 VKPVTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDTGTGKYPWAIVSDPLRAFLFVLVRDPT---QDNTDLLAKTEQLGFTAPWNRARKTVQ-EGCTY 1298
+ V L++ Y GRWYQ Y+ F E+ CVTADY +++DG I V N+ R K DGEL ++TGYA+ D PG+L VH D +P E YW+L +G +G G+Y ++IV+D L+A LFVL RDP + + ++ + GFT WN+ RKT Q E C Y
Sbjct: 19 IDTVPTLNVTSYLGRWYQMYSDFIVEETFERNAVCVTADYTLRKDGKIGVVNSNRDKKPDGELKQITGYAYQPDPEVPGKLKVHFDTVPVEGSYWILKLGPVSG-GQYQYSIVTDGLKATLFVLSRDPNNYEKYDKEIQEFLKNNGFTHLWNKPRKTYQSEDCKY 182
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: UPI001BB2B745 (apolipoprotein D-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2B745) HSP 1 Score: 123 bits (308), Expect = 3.560e-28 Identity = 67/164 (40.85%), Postives = 88/164 (53.66%), Query Frame = 3
Query: 825 VTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDTGTGKYPWAIVSDPLRAFLFVLVRDP-----TQDNTDLLAKTEQLGFTAPWNRARKTVQ-EGCTY 1298
V +LD+ Y GRWYQ Y E+ CVTADYG+ DGSISV N DG ++G A + D SKPG+L V G+P+ YWVL +G GKY +A+VSD + LFVL RD + D T++L GF+ WN ++T Q + C Y
Sbjct: 37 VNELDVPAYLGRWYQVYTDLVVNVTFERNAQCVTADYGLNPDGSISVFNANTVGSPDGRFNTISGKATVPDASKPGQLVVEFPGVPAPGEYWVLKLGPIVD-GKYQYAVVSDSRKVTLFVLARDAAAFMGSDDRTEVLEFLRDTGFSCFWNTPQETYQSDQCKY 199
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: A0A7M7TG77_STRPU (Lipocln_cytosolic_FA-bd_dom domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7TG77_STRPU) HSP 1 Score: 123 bits (308), Expect = 3.870e-28 Identity = 66/166 (39.76%), Postives = 92/166 (55.42%), Query Frame = 3
Query: 825 VTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDTGTGKYPWAIVSDPLRAFLFVLVRDPT-----QDNTDLLAKTEQLGFTAPWNRARKTVQ-EGCTYTT 1304
V +LD+ Y GRWYQ Y E+ CVTADYG+ DG+ISV N DG+ +TG A + D S+PG+L+V G+P YW+L +G G G+Y +++VSD +A LFVL RD + + +LA + GF WNR ++T Q + C Y T
Sbjct: 40 VNELDVQAYLGRWYQVYTDLVVNVTFERNAKCVTADYGLNADGTISVFNANTVGTPDGDFNTITGTATVPDASQPGKLTVQFPGVPVPGDYWILKLGPVVG-GQYQYSVVSDSNKATLFVLARDASAFMGSDEKETVLAFLRESGFKCFWNRPQETYQSDQCNYVT 204
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: A0A7S2XX84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX84_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.070e-27 Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 3
Query: 825 VTKLDIDRYSGRWYQSYASFTAGTLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPS--EAPYWVLAVGN-DTGTGKYPWAIVSDPLRAFLFVLVRDPTQDNTDLLAKT----EQLGFTAPWNRARKTVQEGCTYTTP 1307
V +L++D+Y GRWYQ YAS + +E CV ADYG+ DG++SV N + G+ ++GYA+ +S+PG+L VH +PS + YWVLA+G G Y W+IVSDP RAFLF+L RD + A+ + LGFT+ N +++Q+GC Y P
Sbjct: 136 VAELNLDQYLGRWYQPYASRSVQYTIELGAVCVGADYGLNPDGTVSVLNFNKMLTPGGKDGSISGYAYTPVESEPGQLKVHFPSVPSPQDGDYWVLALGQPQEAGGLYEWSIVSDPNRAFLFILARDVAKFKDKYAAQVLDLVKSLGFTSFLNEPVESLQDGCVYDGP 303
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: A0A813ANC4_9DINO (Apod protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813ANC4_9DINO) HSP 1 Score: 119 bits (299), Expect = 2.310e-27 Identity = 69/162 (42.59%), Postives = 95/162 (58.64%), Query Frame = 3
Query: 834 LDIDRYSGRWYQSYASFTAG-TLLEQQGACVTADYGVKEDGSISVANTARAKGVDGELVEMTGYAHLDDDSKPGELSVHLDGIPSEAPYWVLAVGNDTGTGK-YPWAIVSDPLRAFLFVLVRDP----TQDNTDLLAKTEQLGFTAPWNRARKTVQEG-CTY 1298
L++++Y GRWYQ Y + T+ + CVTADYG+ +G++SV N+AR K G L ++ G+A + D S PG L+VHL G+P APY V +G G Y +A+VSDPL LFVL RDP + NT +L ++ GFT NR T+Q C Y
Sbjct: 1 LNVEQYLGRWYQMYTDVSQNVTIFKGDSYCVTADYGLFPNGTVSVQNSARLKSPTGALDQILGWAAVTDPSNPGALTVHLQGVPFGAPYVVGLLGPPVGPKNLYDFAVVSDPLNLSLFVLARDPDTFRAKYNTAVLTYLKEQGFTNALNRPTPTMQGSQCEY 162
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Match: A0A2B4SE72_STYPI (Apolipoprotein D n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SE72_STYPI) HSP 1 Score: 114 bits (286), Expect = 3.230e-25 Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 3
Query: 222 GNITVINSSRVPIPTGELNTIKGYAYGTDPSNPGQLKVHLGQVPVDGDYWVVGLGPDTFGPESLYQWAIVSGPAAESLFVLVRDVSEFEKTYARDVLDLVVELGFTGRAKEPQRVVQE 575
G + V+NS R+ PTGE I GYAY DP PG+LKVHLG PVD YWVV LGP TFG E LYQ+++V+ +LFVL RDV F+ + V +VE GFT +P +Q+
Sbjct: 63 GKVGVLNSERLRTPTGEGKNITGYAYIPDPKEPGKLKVHLGGTPVDAPYWVVKLGPPTFGAEGLYQYSVVTDNLQITLFVLARDVDTFKSQFDEQVQSWLVENGFTRFYNKPVATLQD 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig115.1155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig115.1155.1 >prot_P-lacustris_contig115.1155.1 ID=prot_P-lacustris_contig115.1155.1|Name=mRNA_P-lacustris_contig115.1155.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=483bp MPSLCPRLPQRAQATSVFLHCTTPQDQATGNITVINSSRVPIPTGELNTIback to top mRNA from alignment at P-lacustris_contig115:95592..101507- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig115.1155.1 ID=mRNA_P-lacustris_contig115.1155.1|Name=mRNA_P-lacustris_contig115.1155.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5916bp|location=Sequence derived from alignment at P-lacustris_contig115:95592..101507- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig115:95592..101507- >mRNA_P-lacustris_contig115.1155.1 ID=mRNA_P-lacustris_contig115.1155.1|Name=mRNA_P-lacustris_contig115.1155.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2898bp|location=Sequence derived from alignment at P-lacustris_contig115:95592..101507- (Pleurocladia lacustris SAG_25_93)back to top |