mRNA_P-lacustris_contig10.83.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig10.83.1
Unique NamemRNA_P-lacustris_contig10.83.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A6H5JDT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT1_9PHAE)

HSP 1 Score: 546 bits (1408), Expect = 6.130e-184
Identity = 301/477 (63.10%), Postives = 344/477 (72.12%), Query Frame = 1
Query:  739 DDNTTTAMKPGASRFGAFLDWFDDYETRKACTAP-YFSDYGGDLPGECYRMGADLIEIDELLRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQAD-------------------------------------------------AIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVALVEAGADVMQRRPNLPGGSRLHLPKADPLAVTTSKQIERYLQSKINVILERELRVLRQKETADFRGRRLREIQEAIARRKEARLFVIQEKQRMIENDSLSLELMKVDKAEEARRARRDWLRLMKVSPGIWVKVEEDASRQQASTGSPKSPGSRGKKPRPRWVFDTSKTISKNEAAAHDVLEEARQVEAFILNGRQKLKILAPRWRAITGKRLLRLEHGQRLGMSAEKKGQAGIRRQRGESGGDAEDGGPLLSG 2019
            DD+     K   S FGA  DW DDY TRK+   P Y+S+YGGDLPGEC RMGADLI++DELLRNGANPN+GR QD+GLTPIHFAARFG+V+LL MLKRAGG+  +TNALGLTPLSY+CAFKLSLSK   DS ERQQ                                                   AI+WLL +GANPNHVDKAGYTPLAWACRSGL+  VVALVEAGADVMQRRP LPGGS++ LPKADPLAVTT KQIE+YLQ+KIN IL RE  +LR++   D R RRL+EIQ AIAR+KE R FVIQEKQRM + + L+LELMKVDKAEEAR+ARRDWLRLMKVSPG+WVKVE  AS   A T     PG R +KP PRWVFDTS  ISK+EA AH VLEEARQVEAFI+NG +K KILAPRWR++TGKRLLRLEHGQR+G++A+ KG+   R+  G  GGD      + SG
Sbjct:   75 DDSVVATKKRSKSPFGAVTDWVDDYRTRKSGYGPPYYSEYGGDLPGECDRMGADLIDVDELLRNGANPNLGRRQDHGLTPIHFAARFGNVDLLKMLKRAGGDPGITNALGLTPLSYTCAFKLSLSKNGGDSWERQQGGTRLNGLGPPAHPRGGLEVFRGCIWTILALSPATYCCRGSFPAVLRDQVAAIKWLLGQGANPNHVDKAGYTPLAWACRSGLFPAVVALVEAGADVMQRRPELPGGSQVRLPKADPLAVTTVKQIEKYLQNKINTILLREEALLRRERKVDLRSRRLKEIQAAIARKKEVRAFVIQEKQRMKQTEELNLELMKVDKAEEARKARRDWLRLMKVSPGMWVKVEGAAS---AGT-----PGVRARKPCPRWVFDTSTAISKSEAKAHGVLEEARQVEAFIINGGEKQKILAPRWRSMTGKRLLRLEHGQRMGLAAKVKGRRQDRQGDGSRGGDVGGDAEISSG 543          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: D8LHY1_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHY1_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 1.510e-144
Identity = 229/307 (74.59%), Postives = 256/307 (83.39%), Query Frame = 1
Query:  886 MGADLIEIDELLRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQADAIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVALVEAGADVMQRRPNLPGGSRLHLPKADPLAVTTSKQIERYLQSKINVILERELRVLRQKETADFRGRRLREIQEAIARRKEARLFVIQEKQRMIENDSLSLELMKVDKAEEARRARRDWLRLMKVSPGIWVKVEEDASRQQASTGSPKSPGSRGKKPRPRWVFDTSKTISKNEAAAHDVLEE 1806
            MGADLI++DELLRNGANPN+G  +D GLTPIHFAARFG+VELL MLKRAGG+  +TNALGLTPLSY+CAFKLSLSK  +DS ERQQ  AI+WLL +GANPNHVDKAGY  LAWACRSG++  VVALVEAGADVMQRRP LPGGS + LPKADPLAVTT KQIERY+Q+KIN IL RE  +LR++   D R RRL+EIQ AIAR+KEAR FVIQEKQRM + + LSLELMKVDKAEEAR+ARRDWLRLMKVSPGIWVKVE  AS   A T     PG R +KPRPRWVFDTS  +SK+EA AH VLEE
Sbjct:    1 MGADLIDVDELLRNGANPNLGHREDQGLTPIHFAARFGNVELLKMLKRAGGDPGITNALGLTPLSYTCAFKLSLSKNGDDSWERQQVAAIKWLLGQGANPNHVDKAGYXXLAWACRSGIFPAVVALVEAGADVMQRRPELPGGSHVRLPKADPLAVTTVKQIERYVQNKINTILLREGALLRRECKVDLRSRRLKEIQAAIARKKEARAFVIQEKQRMKQTEELSLELMKVDKAEEARKARRDWLRLMKVSPGIWVKVEGAAS---AGT-----PGVRARKPRPRWVFDTSTAVSKSEAKAHGVLEE 299          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A7S1U5K5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5K5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.610e-27
Identity = 111/358 (31.01%), Postives = 178/358 (49.72%), Query Frame = 1
Query:  838 PYFSDYGGDLPGECYRMGADLIEIDELLRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKL--SLSKISEDSRERQQADAIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVALVEAGADVMQRRPNLPGGSRLHLPKADPLAVTTSKQIERYLQSKINVILERELRVLRQKETADFRGRRLREIQEAIARRKEARLFVIQEKQRMIENDSLSLELMKVDKAEEARRARRDWLRLMKVSPGIWV-KVEEDASRQQASTGSPKSPGSRGKKPRPRWVFDTSKTISKNEAAAHDVLEEARQVEAFILNGRQKLKILAPRWRAITGKRLLR 1902
            PY  DYGGD+  EC +M A  IE+   L  GANPN+   +D+  T +H++AR     +L M +RAG +++  N LGLTPL+  C F+   +L+K+        Q    ++LLD GA+ NHVDK G+TP+ +A  +G   +V  L++ G  V++          L L  A+ + +++S +    LQ+K++            +E A + G  LRE +E +A  KE R      K R        L      +A+   R R   +++  +S  I   K ++ A+R +A      S G+  K+   +W  D  + + K +A A  VL +A+ +   I   R   K++  RWR +TG  LL+
Sbjct:  109 PYEEDYGGDILEECAKMNASPIEMHMCLNYGANPNLQNPKDSMNTCMHYSARHCHWRILKMCRRAGADMNKENELGLTPLATCCQFQQPPALAKV--------QLKIAKYLLDHGADVNHVDKGGHTPMEYAAFTGNLELVTLLLKYGGRVLRDT------EFLSLVSANAVDLSSSMETRALLQAKLD------------EERAFYTG--LREERERMAYVKEMR------KHRASNARKAILARQAQRRAKIDARVRNQNVQITDLSDLIEDRKKKQRAARDEAIKKLDHSAGAWEKQEHMQW--DYVRGLKKEDAYARTVLHQAQDMMHEIYE-RNSSKMIQTRWRELTGTDLLK 429          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A835Z886_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z886_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.700e-24
Identity = 68/204 (33.33%), Postives = 103/204 (50.49%), Query Frame = 1
Query:  838 PYFSDYGGDLPGECYRMGADLIEIDELLRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQADAIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVALVEAGADVMQRRPNLPGGSRLHLPKADPLAVTTSKQIERYLQSKINVILERELRVLRQKETAD 1449
            PY  DY G+LP EC     ++ EI  +L+ GA+PN   + DNG T +H+AAR+G VE+LTML+ AGG+++  N LG+TPLSY+C F L   +  +    ++Q   + WLLD                           V AL+ AGA + + R  +           D + +T+  +I   LQ++++ I   E  V R K  A+
Sbjct:   50 PYSDDYDGNLPEECNTFLPNVQEIHGMLKRGADPNARVKADNGCTAVHYAARYGLVEVLTMLQLAGGDVNTANTLGMTPLSYACRFPLVAEEDGKGLLAKRQTQTVLWLLDAXXXXXXXXXXXXXXXXXXXXXXXXXGVQALLAAGAKLTRTRKWV-----------DVMGITSDPKIRSILQAEVDRIRAEEEAVARAKALAE 242          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A1J9QCQ4_9EURO (Uncharacterized protein n=1 Tax=Blastomyces percursus TaxID=1658174 RepID=A0A1J9QCQ4_9EURO)

HSP 1 Score: 72.0 bits (175), Expect = 3.740e-10
Identity = 47/133 (35.34%), Postives = 68/133 (51.13%), Query Frame = 1
Query:  919 LRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQADAIRWLLDKGANPNHVDKAGYTP--LAWACRSGLYLVVVALVEAGADVMQRRPNLPG 1311
            +++GA+P       +G  P+H A+  G   L+ +L   G  +DV N+ G TPL  +    LS ++     R+R     +RWLLD GA+P+ V KAG +P  LA  CR  LY  ++ L    A V    P L G
Sbjct:    6 IKHGADPQAPFPAHHGGYPLHVASCSGPAGLVRLLLEHGAEVDVRNSKGWTPLYCAIRPLLSPAEYVPHKRKRVAPVRVRWLLDYGADPDPVTKAGESPSLLAKRCRD-LYGQMILLGGKWAKVSLHEPRLDG 137          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A1G2NCJ5_9BACT (Uncharacterized protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_48_100 TaxID=1802322 RepID=A0A1G2NCJ5_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 9.600e-10
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 1
Query:  892 ADLIEIDELLRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQADAIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVAL 1263
            AD   +  L++NGANPN+ ++++   T +HFAA    +E++T L   G  +D  +  G TPL + C      SKI+         D ++ LL+KGANPN ++K G +P   A   G   ++ AL
Sbjct:   16 ADSKMVQFLIQNGANPNI-KDKEQNWTALHFAASGQKLEVVTKLLDLGAIVDTEDIFGNTPL-WRCVLN---SKIN--------LDVVKLLLEKGANPNKLNKKGVSPRILAESIGKTEMIEAL 126          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A257VUB7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetales bacterium 12-60-4 TaxID=1970541 RepID=A0A257VUB7_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 5.400e-9
Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 1
Query:  913 ELLRNGANPNVGREQ-------------DNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQA-DAIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVALVEAGADV-MQRRPNLPGG----------SRLHLPKADPLAVTT 1359
            EL++ GAN N    +               G TP  FAA  GDV L+ +L + G +  + NA G TPL    A  +  ++  E++ E  +A +A++ LLD GAN N VD+ G T +  A  +    VV  L + GAD  + ++PN  GG          SRL  P A  +A  T
Sbjct:   16 ELVKRGANVNFQLPKGAPKQPATSSGIRSEGATPFLFAADRGDVPLMRLLLQLGADPLLPNADGTTPLL--AAAGVGTNEPQEEAGEESEALEAVKLLLDLGANINTVDRNGDTAMHGAAYNISPQVVNLLAQRGADPHLWKKPNKAGGTPLFIAEGYISRLPRPDAPTIAAIT 187          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A6P7U0I5_OCTVU (transient receptor potential cation channel subfamily A member 1 homolog n=2 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7U0I5_OCTVU)

HSP 1 Score: 68.6 bits (166), Expect = 4.460e-8
Identity = 35/119 (29.41%), Postives = 66/119 (55.46%), Query Frame = 1
Query:  940 NVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSK------ISEDSRERQ---QADAIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVALVE 1269
            N+ +  DN L+P+H+A R+G+++++ +L   G +++     G  PL ++  +K   SK      +SED+ + +   +   I +L+++GA+ N  D  G TPL +A   G  + V  LV+
Sbjct:   59 NINKHDDNELSPLHYAVRYGNIDIVKLLVENGAHINDPGDYGAQPLHFAAKYKRDASKRSDATPVSEDAPDAEDLAEYGVIPYLVERGADINAQDTYGSTPLHFAAMRGNDVAVTLLVQ 177          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: C5GMT3_AJEDR (F-box domain-containing protein n=4 Tax=Blastomyces TaxID=229219 RepID=C5GMT3_AJEDR)

HSP 1 Score: 67.0 bits (162), Expect = 6.850e-8
Identity = 47/134 (35.07%), Postives = 69/134 (51.49%), Query Frame = 1
Query:  916 LLRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQADAIRWLLDKGANPNHVDKAGYTP--LAWACRSGLYLVVVALVEAGADVMQRRPNLPG 1311
            L+++GA+P+      +G   +H A   G   LL +L   G  +DV N+ G TPL  +    L  +    D+R+R  A  +R LLD GA+P+ V KAG +P  LA  CR   Y+ ++ L   GA V     +L G
Sbjct:  127 LIQHGADPHTPFPAHHGGCLLHVACCSGPAGLLRLLLEQGVEVDVRNSKGWTPLYCAVRPLLLRADSVSDNRKRVAAARVRLLLDYGADPDAVTKAGKSPRLLAKRCRDP-YVRMMLLGGKGAKVSLHEASLEG 259          
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Match: A0A7V4UHF4_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V4UHF4_9PLAN)

HSP 1 Score: 67.0 bits (162), Expect = 7.890e-8
Identity = 44/134 (32.84%), Postives = 60/134 (44.78%), Query Frame = 1
Query:  883 RMGADLIEIDELLRNGANPNVGREQDNGLTPIHFAARFGDVELLTMLKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQADAIRWLLDKGANPNHVDKAGYTPLAWACRSGLYLVVVALVEAGADV 1284
            R+ A    ++  L +G +   GR    G TP   AAR  DV L+ +L   G +  ++NA    PL  +               E +  +A+R LLD GANPN VD  G T +  A       VV  L E GAD+
Sbjct:  300 RLAAKGANVNARLESGESGR-GRFTTTGSTPFLLAARASDVPLMKLLLELGADPTISNADNCPPLLAAAGVGALGDGDEAAGTEEESVEAVRLLLDLGANPNAVDDNGETAMHGAAYQSRPKVVHLLAERGADI 432          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig10.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDT1_9PHAE6.130e-18463.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHY1_ECTSI1.510e-14474.59Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A7S1U5K5_9STRA1.610e-2731.01Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835Z886_9STRA1.700e-2433.33Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A1J9QCQ4_9EURO3.740e-1035.34Uncharacterized protein n=1 Tax=Blastomyces percur... [more]
A0A1G2NCJ5_9BACT9.600e-1034.68Uncharacterized protein n=1 Tax=Candidatus Taylorb... [more]
A0A257VUB7_9BACT5.400e-933.33Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A6P7U0I5_OCTVU4.460e-829.41transient receptor potential cation channel subfam... [more]
C5GMT3_AJEDR6.850e-835.07F-box domain-containing protein n=4 Tax=Blastomyce... [more]
A0A7V4UHF4_9PLAN7.890e-832.84Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig10contigP-lacustris_contig10:200018..215186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.6
Seed ortholog evalue7.2e-120
Seed eggNOG ortholog2880.D8LHY1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionGamma-tocopherol methyltransferase
Ec32 orthologEc-18_000910.2
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2354
Cds size1350
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig10.83.1prot_P-lacustris_contig10.83.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig10 200302..206599 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815258.0115683-UTR-P-lacustris_contig10:200017..2003011622815258.0115683-UTR-P-lacustris_contig10:200017..200301Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig10 200018..200301 -
1693493435.470942-UTR-P-lacustris_contig10:200017..2003011693493435.470942-UTR-P-lacustris_contig10:200017..200301Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig10 200018..200301 -
1622815258.127305-UTR-P-lacustris_contig10:206599..2070601622815258.127305-UTR-P-lacustris_contig10:206599..207060Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig10 206600..207060 -
1693493435.6433764-UTR-P-lacustris_contig10:206599..2070601693493435.6433764-UTR-P-lacustris_contig10:206599..207060Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig10 206600..207060 -
1622815258.138891-UTR-P-lacustris_contig10:214927..2151861622815258.138891-UTR-P-lacustris_contig10:214927..215186Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig10 214928..215186 -
1693493435.6547537-UTR-P-lacustris_contig10:214927..2151861693493435.6547537-UTR-P-lacustris_contig10:214927..215186Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig10 214928..215186 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815258.025832-CDS-P-lacustris_contig10:200301..2005651622815258.025832-CDS-P-lacustris_contig10:200301..200565Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 200302..200565 -
1693493435.491083-CDS-P-lacustris_contig10:200301..2005651693493435.491083-CDS-P-lacustris_contig10:200301..200565Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 200302..200565 -
1622815258.0419898-CDS-P-lacustris_contig10:201234..2013781622815258.0419898-CDS-P-lacustris_contig10:201234..201378Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 201235..201378 -
1693493435.5080712-CDS-P-lacustris_contig10:201234..2013781693493435.5080712-CDS-P-lacustris_contig10:201234..201378Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 201235..201378 -
1622815258.0514338-CDS-P-lacustris_contig10:202285..2024111622815258.0514338-CDS-P-lacustris_contig10:202285..202411Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 202286..202411 -
1693493435.5179296-CDS-P-lacustris_contig10:202285..2024111693493435.5179296-CDS-P-lacustris_contig10:202285..202411Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 202286..202411 -
1622815258.0650403-CDS-P-lacustris_contig10:203211..2033611622815258.0650403-CDS-P-lacustris_contig10:203211..203361Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 203212..203361 -
1693493435.537697-CDS-P-lacustris_contig10:203211..2033611693493435.537697-CDS-P-lacustris_contig10:203211..203361Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 203212..203361 -
1622815258.074881-CDS-P-lacustris_contig10:203700..2037701622815258.074881-CDS-P-lacustris_contig10:203700..203770Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 203701..203770 -
1693493435.5741088-CDS-P-lacustris_contig10:203700..2037701693493435.5741088-CDS-P-lacustris_contig10:203700..203770Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 203701..203770 -
1622815258.085235-CDS-P-lacustris_contig10:204204..2043771622815258.085235-CDS-P-lacustris_contig10:204204..204377Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 204205..204377 -
1693493435.6018763-CDS-P-lacustris_contig10:204204..2043771693493435.6018763-CDS-P-lacustris_contig10:204204..204377Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 204205..204377 -
1622815258.0945399-CDS-P-lacustris_contig10:204644..2047951622815258.0945399-CDS-P-lacustris_contig10:204644..204795Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 204645..204795 -
1693493435.6134784-CDS-P-lacustris_contig10:204644..2047951693493435.6134784-CDS-P-lacustris_contig10:204644..204795Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 204645..204795 -
1622815258.107598-CDS-P-lacustris_contig10:205470..2055601622815258.107598-CDS-P-lacustris_contig10:205470..205560Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 205471..205560 -
1693493435.622969-CDS-P-lacustris_contig10:205470..2055601693493435.622969-CDS-P-lacustris_contig10:205470..205560Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 205471..205560 -
1622815258.1177804-CDS-P-lacustris_contig10:206417..2065991622815258.1177804-CDS-P-lacustris_contig10:206417..206599Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 206418..206599 -
1693493435.632258-CDS-P-lacustris_contig10:206417..2065991693493435.632258-CDS-P-lacustris_contig10:206417..206599Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig10 206418..206599 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig10.83.1

>prot_P-lacustris_contig10.83.1 ID=prot_P-lacustris_contig10.83.1|Name=mRNA_P-lacustris_contig10.83.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=450bp
MKKKHPDDNTTTAMKPGASRFGAFLDWFDDYETRKACTAPYFSDYGGDLP
GECYRMGADLIEIDELLRNGANPNVGREQDNGLTPIHFAARFGDVELLTM
LKRAGGNLDVTNALGLTPLSYSCAFKLSLSKISEDSRERQQADAIRWLLD
KGANPNHVDKAGYTPLAWACRSGLYLVVVALVEAGADVMQRRPNLPGGSR
LHLPKADPLAVTTSKQIERYLQSKINVILERELRVLRQKETADFRGRRLR
EIQEAIARRKEARLFVIQEKQRMIENDSLSLELMKVDKAEEARRARRDWL
RLMKVSPGIWVKVEEDASRQQASTGSPKSPGSRGKKPRPRWVFDTSKTIS
KNEAAAHDVLEEARQVEAFILNGRQKLKILAPRWRAITGKRLLRLEHGQR
LGMSAEKKGQAGIRRQRGESGGDAEDGGPLLSGLDEEGSDVSRSSDDGG*
back to top

mRNA from alignment at P-lacustris_contig10:200018..215186-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig10.83.1 ID=mRNA_P-lacustris_contig10.83.1|Name=mRNA_P-lacustris_contig10.83.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=15169bp|location=Sequence derived from alignment at P-lacustris_contig10:200018..215186- (Pleurocladia lacustris SAG_25_93)
GTCGGGTGTCGGAACGGAACAACGTGGAGCAGCCGTGCAGGAACAGAGGA CGAGCGATCGTCCCAGGGAGGAACGCGCCTCAGCTGACCCAGATAGAGAA GGCTTCACGTCTTGGCAGGATCACGTTTGACGGCTCATGCGCACAGAGAG AGCAAGCTTTTGGGCAAATGGCTACCCCTGCTCCCGCTAACAGCGGGGGG ACAAAGTCGATTACCGAAACGCAACAAAGAAGGCCGAGCATCGGTGGCAG CATTGAGAGGTATGTAGGAGGTACTCCCGGAGAAGGGCCAGGGAAAGAAG TAGATGCTTGCGTGTTAAAGGGAGCCAGGTACTGCAAGACCACGTTCAAC GTGCGTATCAACATGGGGGTTGAAACACAGCAAGCGAAACACTACATACC ATACCCCGATGATAACATTTTGGAGTTTAAAAAACTCTCTGGGTTTGATA TTATTGTGTGTGGGTATGATATCTTTGTCAGGTATGATATAACATTAACA TTTACTTTTAGCGTTTAACAAAAAGTGTAAGCGGCAGGCGTCATTAAACC ATTTCTGTAAAGACTTGTACAAAAACCACCTGGGCAGGGACTTCTCAGAA GGTATCTAGGTCTTTCTGTTATGTGATGTAATTCCTCGGAGTGTGTGTGT GTGTGTGTTTTCGTCCCATCTATTATTGGCGACGGTCCCCCCGATCAAGG TGAGACGTGTACTACACGTTGCGGTGTATTAACGGACTACACTTTTAGTG TATTTTTTTAATTCCACTAGAACCAACCGGGGTCACACAGGAGGGGGTAA ACACAGGGCTTTTTTCTTCTTTTTTATGACTTTTTTTGCCCCACCTTCCT CCTGCGGTGCGTGCCTTAATTTTTATCGCGAGAAGGGTTCGGCCGTCCTT TCCCTCGTCAACGTTGCTAACGTCGAAGTTTGGTACTCACGAGCTTTTCA GCTTTTTTTCGCTTTCACCCGCAAATTTGCAAATTTTTCACCCCCAGGGG ATTCGAACTCACGACCTTTGCTGCTAGATGGCTTCGAGGCTACCACTAGA CCACCGGGGCGACCTATAGACTATATTAACAATTTTTAAAATAACCTTGT CTTTGTCTTCCAAAAACCCGAGAAATAAAAATAAATAAACATCCCAACCG AGCAACCAAACCAGACAAACAAAACAAAAGAATTAGAAACTCATTGAGAC CATAATAAAAATATACCACGTTCTGAAAATTAATATTACAACAACAGCTG TTTTAGTAGTGATATTTTTTTGGTCACACCGACCTTATCGAGACGAGACA AACGAGACGAAGGACGGACAGAAACAGAAACAGGGTGTAGGAGATATCCC GCGTGGATCCCTCACCGAAGAGATGATAAGATGGTGAGACTCGTTATGGT CGTATCATACACTGCCTGCTGCTTTATTCCACATGCACCGAGTTTATCGC AGGTGCGTGTCGCGTGTACGGGATCGTATCTTTGGAGTTCAAAAACTAAA ACGTATCACCGGGTATGATATTGTGTGGGGGTATGATATATTATGTCGCG GGTATAATAACGGGCATGCACAGGATCAACATGTGATACACTTGTAGAAC AGTAGTGCTGCACCCCGGGTAAAAAACAAAATGCAAATAAAAAAAAAATC CTATATTCCCCAAGGCACAAGGCGCTCCCTGTGAGATGAAACAAATCTGA GGTCGCACAGCACTAGATGACTCTAATACCTACTTAGGGAAACTTTTTTC ATCAAATTCCATGCACAATAGCGATCAAACGACGCGTCGCGAGGTCAGCG TCAAGCCTGAAAAAGTGTGCCGGCAGCATCCAGTGCGGCGGAACCTCCCA CTGCACACCCGAGCTTCGGATCAAGGGCGAGAACGCGCCCAGGGGAAAAC CAATCGACGCGAAATTTGGCACTCAGCTGCAGTGTACCACTGGTAGCGTA GGTGTATGAAGATTGTTGCGTATAGGCCAAGGAACTAGAGGAAAGGGCAG ATAACGCAGAATACGGATATTCATAGACTTTTTCTCGTGCGCCTCCGGCG ATGTAGAGGCTTCCGAAGGTTAGCTGCGTGTCTTGCGATTGTTCAGCACT TTGAACTGCTGTAAGACTCGCACTACAGGGCAAGTATTCCCAAACAGCGT GCAGCTGTTTTTGAATGGAAAGACCGTTATTTTGGTGATGATACACCGAC GCGTGAACTGAAAAAAAAATCCGGTTGATTGTATGTAGTCCTCCCTCAAC AACTGAGCAGATACATACATGTTCTGCTCTGAGGCGTGTTCCTATCCAGG ATAAAAAAGCCACCTGCGTGACGTGACCAGCGTTTAATCTTAGCAATGAT CGCCCCTGACGTAGAAGATCTTTTGCCGGGGAACATTAGACTATAATCTT ACAAATTTATCACAACAGACAGTCGTTTTCGTCCTCCGTCCTCCGCCCGG CCGCACAGCGGTGGAGGTACTGGAACTTCTATATGTATATTATATATGCC CCGAGTATGCATAGCAGTCACTTTGGGCCCACGCTGCAAACAGAACCAAC CTCGAAGCCTCTTCGTTTTGTCTCGGGTTACAATCTTTCGTTGATTTCAT GTAATACTTGGTATGTAACGTTCTTCAACACGAAAATCAATCGTACCGAC GCGAACCCCCGGGCGACTAGGTAGCAACAGACCAGGTCGATGCCGTTGGG TCGCAGCTGGAAATCCTGACTAATCCTGACTTCCCTTTAACTCTATTATT ATTGTGTGTGTATACGAACTAAAATAAAAAAGGGTGGATGTCCCCTCTGT CTATCTCGCGACAAGGACGAGTCACATTTCAGGGGCCAAAATAACAGAAT TAGCAAAAACAAAAAACGGAGTAATAGAAATAGCACCAAAACCACGATAC TACGGGTTATCCTGCTCGGACGGCAACGCTCGGGGCTCGTTTTGTCCTCT AGACAATATCTATTGAATGATATGTTCAACGGTAGGTACCTCGCCCAAGT GTGCACGCGGACAATTAGGATTCACCCACGTGGACTACATCCTTATTACA CTCTCGACAGAGCTAGCGCAAACACATATTATGTTAAGTGAACCATGGCC TACAACAGCCGATACACAGCCCACACAAAATGGGGGCAACGATTTCCTTA GTTTGCTTGGCCTCTGCTGTCTTATACATTTCCATCGTTACTAGAAGGGG GTAGGTTTGAGAAGCAGCGTGTGTGCGTCAGTGGGTGAACGCTTGTGTGC TTCTCAACTAACTGCGTTAAGCTGTATGTTGCGGGCACACCAGTCAAGTA CATACATACATACACCGAATGAACTGGCTCTCGAGAGAGAAAAAGATGAA ATCAAGCACAAAAATAATGAAATCCAAAAGCCAGTCAAGTATACACCGAA CTGCACTCAGTCTGGCTCTCTCTCGAGAAAAAAAAGATGAAATCAATAAG AATAATAATGAAATCCAAAAGCCCAAGGGGTCATTTCATATCAAATCGGG TCATCTAATGTCAAATAAATAAATTAAATGCAGAATGCTTCAGACAGAGA GTGCGGTGCCGACAGGGCCACGAAGGGGCTGTGTAGGTATCTCCAAGCCT ACACTACTGCTGTATGTAGGGCACAGTGAGAGGTGCTGTCAGGACGACAG GAGGAGTAAGTAGTGTGTGTATGTTCTACAGCAGTCAGTCGTGGGGGCTG CTTGATGAACATCTCTCTCTCTGAAAAAAGCAAGACAGCCAAAAAGCGAA ACACATCATCAATCAGAAGAAAATCAGAGACAAAAAAAAGAACAAAACTA CTGCTGGTTGTTGACACAGACAGCCTCCTCTCGGTGGCCCGGCATCAGCT GCTGCAGCGCTTTGTATGCTATTACAGCTGTCCTCTTCTTCAGCTCTCTC TCTCTCTCCTAGCTAGGCGCTTTGTACTCTCTCTGCTCTGTCTGTCTGTG ACTGTCTCTACAGCTCTTCTCCCTCTCTCTGTGCATCTCAGGAGGAGCGC TTGCTCGCGCTTTACTCTCCCTTTCTTTACTCTGTCTGTCTGTCTGATGT CCTCTGCATACTATACTACATCTCTCTCTCTCTCCTGTGCGCTTTCTCTC TCTGTGCATCAGCAGCCTTCTAGTATACTCTCTCTCTGCTCTGCCTGCCC TCGTCTACACCTCTCCTCTCTCTCTCTCGTTGGCTCTCTCTGCTCTGTGT CTGCCTGACTCCAACAACAACAGCTCTCTGCTCCCTCTCTAAAAACGCCT GGTGAACCAAGTCATCAACTCCGCTCTATGCACACGTTTGACGTCCTTGC TCGCCCATTTCTGCACGGGTTGCAGGATAACAAGCAGCAATAGCTTGAGC TATTTAGTATCATCAGTTCAAGCCCTTGGTTGCGCCGATGTGTGGCGAGT TCGTCGCGTTGTGAATCAAAACGTGCGTCTATATTTTGCGAGGACAGAAA GACACACACACACACATACAGACACAAAAAATAGCGTTTGATGAAATTTG GCTTCGTATGGCAGATTTATTTTTTTTTCACACACCCCCACAGTCCCGCG ATGTCGGTAGGAATTCGAAGCCATGCTTCTCGCTATCGCGCGAAACATTC GGCTCGCTTCGCTCGCCGCTGCTTCTCAATAAAAACAAAACAAAACGGGC AGTGGTTACTTCGTTCAAGCGAAGACCGCGCTCATGGGAGGCACACATGA ACCTCCCGTTGGAAAAAGGTCGTGCAAAAACAATGGCCGCTTTCAGACGA CAACTCTTTGCACCCATTACATTCATCATCACAGATACAGATAACACAAG GGATTTCCTCTATAGGGTCTATTTATTTTGCGAATGGCAACATAGTGGGT TCTCCTCGGAGCGTCACCGGACCCCCGTGATTGCAAACGACACCAAAAAG CGCCGGGAACCATATTACCTCCGAAGCACACGGTTGAAAAAGAACATAAT CCGCGTAAAAAATCGTGTCGTAGGCGCTGCCACCCACGCACGCCATCCGC ATGCCCTTTCCCCCTCCAACACCCGGGTACCCTTCCCCTAGTCGGATCCC GGAACTCAACGACCCTCTTGGACGTCGAGAAAGGGATAACCAAACCCGCT GGAGTTCCTCTCCAGCGGGATACAGACAGCACGTCCGGGGCTGTCATGGG GCTCGTACGCCACCCTTAGCGGCAGAAGCACGACACACGGCCCTGTTGAA TCACCAACAAGGACGCGCAAATGCCGGTAAACAAAAGACATAATTTTCTC CATGCAAGCCATACTAAGGGCTGAAATAGAGGGAGTTTTAATACCGTAAG CCGCGAAAGTACAACGGTGATTTGTGGATGTTGAACGTAAATGCCCTGGG TGCAACACGGAAACAGCACCGTCCCCAATCCCCACCACGCGACAATTGTG CTAACCAAAAAAAAACAAAAAGTAGGAAAAGAAAAAACAAGAAGTAGGAA AAGAAAAAACAACAAGTAGGAAAAGAAAAAACAACAACGAGAGCTACGAA GAACACGCTCACCTTAGGCGGCATCCACACTTCTCGAGCCATGGTGTACT CAACCCCCAACGTCAACGTCAAATCACCCTCTTTAGTCTTGTTCTTCGTA CGTCAAACCCCAGTACTCCGCCCCCTCAAATGAACCATCAGAACCCCCAG CCTCTGTCGCCAGACTCATCCGGTTGCCATCCAGGGGTGTCTGAGGAGAT TTCGGACTCAGCATCCGAAATGCTGTGGTCGACTTCCGGCTCGGGACTCA CTGGTTCGTCGTTCTCCGGTTGATCGGTGTCCGGTTCCAGCCTATCGAAG TTGGCGGCGAACAGCTCCATGGCCCTGGCGACGGCAGAGGAACGGTATCT ACCGGCGACGACCGAGGACGGCGTAGCGCTGAGGGGTGCCTCCGGTGAAG CCTCCGTTGCGTGTTGACAGGCTTGTCTGCAGCCGCCGAGGAGCGAGCAC CCTCTCCCATTGCAGCGGCACGACTTGCACCCACGCTTCGCAGCCGAGTC AGGATTGCAACCGCATGTCTGCGTGACTGTTTTTGCGTGGGGCCCGACGT ACGAATATTCGGACAACCTTAGTACACAGTTCTGCGCTATGAGTTTCGCC CCATCACTCCCCGTGGCCTTCGGGTCGATGCCCCACTCGTAATCGATGAA GTCTCCATTCGGCTCCTCCTCTTGAAGAGCATCCTGCCAGTACCCCATCA ATCCCTTGCCTCGCAGACATTGCAAGCGCATCGATTCGAAACTGGGGCAC GTGGCCGTCGTTTTCATTCCTTCTTTTTGAGGATGGCGAAACGAATCACC TCGACGTAAGCCTCCACATTACCCCCCACCTGCTGGAGAATAGAACCCGG AGTCAATTCTGCGCGAAGAAACACCGCCTCATTCTTCCACCAGGACATCG TCGCAAGATTCTTGACGCATCGGTCGATCTTTACCCCCCACACTCCGTCC TCCTCCTGCTCGAATAGTGAACCCTCAAACAGATCCGGCAATCGCACCTT TTAAGGGCGAAGTCCCACATCTTGGTGAATGGCAGGGCGGAAGTGGCAGG GAGGAAGTCGCAGCCCGCGAGAAGGTAAACGAGAACGAACAGACGGACCT TGTCGTTGTGGTCGGGTTTCCAGCCGTCGAAATTTTCCGCCGGCCATGCA GAGTCGCTCCCGTCCTCGAGTTTGCATATCTTGGTGAATGCTCGGTTCAC CAAGAGGTACTGCCTCTTCCTACCGACCACCCTCTCCACGGTGACTTCCA CTCTATCCGAGCCCTGAGCTTGATTTTTTCCGGCGCTCATCGCGAGAAGG AGAATCATCCATTGATCCGCGTCGACTAATGACACGAGCCACCTGTCGAA GCTTTTCCCCCAGCGGGTCCACTATGAGCCCTCTTATGCTCACTCTCACT CTCAGTTCAAGGTGTTTTATTCGCCTCGCTGAGCCTCGCTCGATACTGTA GCGCACACAAAACGCCTCCTCACGCTCACGTGATTTGATTTTTGGCGGCG TGGCGTGGACGGGAAAATCGTTCCGTGTCGACCCATCTGCTAGGGCTCGA GGCTGGACCGCGAGCCGGCGTACAGCCCCCGTCAAGCACGCCTCAATCTC CGCCATTTCCGACTCTGAACCTGCACCTTTCTTCTCGGTGCTGGCTAAAT CGAAATAGTGCCCTCCACTTCCAAGTGATATGGCTCTTACGACCTATCCG AAAATGTCCCGAGGCCCACGGCTTCATCGCTGCTCTCCAGCTACATACAC CTCGACCGCCGGTACTCATACACAAAGAGTCACTGATACACTCTAGTCGT GATGTGCAGCAGTGGTTGTGCCTTAGAGCTAGCTTAACTATTGTTTTCCT TCCCAGCGTCTTGGAACGAGCTCCTCTCGGCTTCAAGTCACTGGAAGTGG TTCTTTCAGTAGCGCAACATTTGCTGGCTCTCAGTTGTATGTTCGAGCAG GAGCATGTTCCAGGACGAATCGGTTCAGCCGCTCCATTTCTGCGTTCGAG TTACGCTAGCGAGGATGTATGCGCGTGACAATTATAAGCCGCAGCGTGTT CCAACCCTAACCCTAACCCTAGCGGTTCTTCATCTCATCCCATCCCGTCC CATCGCATCTCATCTCATTCCATCCCATCCCATCTCATCCCATTGCATCG TGGGCAGCAGTGGCATAGTGGTAGCTGTGGTTGTGGCTGACACTGGTGCA GCGTACAGCAACTCACCGCGGCACACATACACCTGCCGACACACAAAAAG GAGAGCCTTACGCCGCCGTTCGTCCCTCTCCTTGCCTTGCGGTTTATGCA AGCCGGAGGGAGGGGGGCGTCTCGATGAGGGTAGCTAACCCTAACCCTAA CCCTAACCCTAACCCTCGCGCATCAGGAGCCTTGTAGTCGATAGTCTATA GCGGGTATTAACTATGAATATGACTATGGAGGGCCCCTCGTTTCGCCAGG GTTATTGAATTCGAGCACACTGGCTCTTATTCCCTACTCCCAAATGGGGC TCTGGTAAGCCACCGTAGAGCAGACCTCCGCATAGCACAATGTCAAATTC CTGCACCTGCAACTCCCTTTTTAAACCGGCGAAACATTCGTTAATACCGT TTTTTTTTTTTTTTTTTCCGTGACAGCGGTCAAGGTCAAGGAAGGAGGAC TTCGAGGAAGCAGTCGGATGGTTCAGGGCATGCTGCTTCGTCGCTGGAGG GCGACGGTGGCCAGGATAGGTATAGTTTCTCGGAGCACCCCCCTGATGAC ACGGTCACGCACTTGGAGGAGGAGAAGGAGGAGTCCTGGCCGGCCAATGC GTCACCAGGGACAATCCAAAAGTGTGTGCTGACTTTGCTCTTCTATATTG GGGTCTTTTCGTCTCGTCTCCACACCATGGTTGAGGACTTTGCACTAGGA CAGGCGTCGCGATGCTTTGTTCTCATCAAGGCGAAGCAGTGCTCTTTGCT TTATAGTGAGTATTTTACAAGGGATGTTCGAATCCACCACATGTCGTTGC GGCGGATGTTTAGCCAACGTGCTCAAGGCTCAACTGCTCGCCTCACAACC ACGGCCCTTACCCAGTTGATCGATCGATCACCAAACCATGAAAAAAAAGC ATCCCGATGACAACACGACAACAGCGATGAAGCCAGGAGCAAGTCGTTTC GGAGCGTTTTTGGACTGGTTCGACGACTACGAGACCAGGAAGGCGTGTAC GGCCCCCTACTTCTCCGATTACGGGGGCGACTTGCCTGGAGAGTGCTACC GGATGGGGGCAGATCTCATGTGGGGTACTTGTGTGCGTGTCTCATTTATT AGCATCGACCGCGCTAACCGGCTGGCCAATGAAAAGGATTCAGTCTTAGG CGGACAGAAAAAACGCTAGAGCGTATTCTCAACCGCCAGGCAGGCTCCCT GATCCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTTTGTGTATCATTTTTTAGCATCGACCGCGCTAACCGGC TGACCAATGAGAAGACGTCAGTCGTAGGCGGACAGAAAAAACGCCAAAAC GTGTTCTAAACCGCGGTCTCCCCTGATGCGGGGGGTGCGGAGGAAACAGA CGGGGATAATCGAACCGGATTCAAAGAGAGCGAGAGCGAGCGAGCGAGCG AGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTATTGTGTGTGTATGGAGGC GTGTCGTTTCTTCTCTTCTTGGCTGGATAGCTCCAGCACCCTTTCCCACT ACACCAGTCGCTGGTATTCCGTTGTGTTGTTTGGTTCGCCCCCGGAACGG TTCTCCTCCTCCTCGTTTCTCCCCCAAAAAAAAGAGCAAGAGAGGTGGCG GTGCCGATGAGGGTAACTCGTCCTACAACTTTCATGCGGTTCCTAGAGCT TTGTATTGCCGAGAAGTTGCGTTTGTTGGTGTTTGTTGTCGATTATCGCG ATCACCCTCGTTGTCACGGAGGACTCCCGCTTCCATCATCCACTACCGGG CCCAGAGCTAAAACGTGTTGCGGTGAGTGAGATGTGTCCTGGGTTGACCG TCGACTACCCTCTGGTTGGTTTGCTGTGGATCGTGATGCGATGAAGATGG TGATGACCATGATCGTGCCGATGCAGAGAAATCGATGAGCTCCTTCGTAA CGGGGCTAACCCCAACGTGGGACGCGAACAAGACAACGGGCTAACCCCCA TACACTTCGCAGCCAGGTATGCCCTATACTGCTTTGTTTCAAGCGTGTAA AATGTGTGCGCAGTACTGACAAGCATGACGCCTACGCCTGCGTTACATAT GCCCTTGTTTTGGAATCAGCGGTTTGGGGAGGGTACACGCGAATTCTATT CTATTGGCGTATGTATGTATGCATTGACTTGTACTTCCGTGCATTGTTCG TGCACGCCCTAGTCAATCAATCAATCAACCAATGAATGTGAATGAATGAA TGAATCACTCGTTTGAGGGGCATCTCATCCCAGAGAAGAAAAAGAGGATG CGTGTCGTCTGTCCATAGCTGGTGTTGGTGTTGTCGAGCGACAGCTCGAG CGTTCATTCACCGTACCTGGGTTGCATGTGTTGACCCATGTTGCATGTGT TGTATCGCGGGGCTACCACGCGTCCTCCACCATCATGTTCATTACGCCAA CACAGGAGCGTGTCGTGTGCTTGTAGACACACGCTTTGGGCACCAACCCT AGACGTAGTTTACCACAGAGAAACTTCGCCGCATGAACTATCGGTGACTG ACTGATGCTGTGCTCTTCGTCCCCTGGCATCGTATCTCATGGATGTTTCC TGCTTTCCCCCCGTGGTCAGTTTTTGCGTGTTTTCGGGCCTCGTTTTGCC TGGCGATTTCACATCTCTTCGGGGTCGTATGCATCGGATAGGTTTGGGGA CGTGGAGCTTCTCACGATGCTCAAGCGGGCGGGAGGAAACCTGGACGTCA CCAATGCGCTGGGTCTCACACCTCTATCGTACTCCTGCGCTTTCAAGCTC TCCCTGAGCAAGATATCCGAAGATTCCCGGGAGCGCCAGCAGGTGCTTGC TTTATTGGCGAAGCCTAGCCAACCCTAGCCAACGCACCCGCGTGTGCCTA CAAGAATTGCACTGCGCCCCATGGGCTAAACACAGACACAGGCGGGTACT GTGTCGCGTCGAACGCACCTGTAGGTCGGCATATGTACGAAAGAACACAA GAGCTTGTGCGACGCGAAGTACAAGAAAATTCTAAGAAACTTCTGCTGTC CGGTCTGCACCCGTTTTCCCTCGTTCGAAATTTTTGTACTTTCTGCCGCT CGCGGTTAGGCAGACGCGATACGATGGCTGCTGGATAAGGGCGCGAATCC CAATCACGTGGACAAAGCGGGCTACACCCCTCTGGCCTGGGCTTGCCGGA GCGGGCTGTATCTGGTGGTGGTTGCGCTTGTCGAAGCAGGGGCGGACGTC ATGCAGCGAAGGCCGAACCTTCCCGGCGGAAGGTAAGGTAAAGTAAAGCA GGAAACCCTCTCCAAGATAGATAGGTCATCGCAGCACACGCTAGCGGCCG CTACCCTTTTTTCGCCGCCCTTCGAAGTTGCACTCCGTCCGTTCCGTAGT TATCCTACCCTAGCCTCTGACATTCTACATGAGCGTACTGTTTCATGGTA TGTTATTGGAGAGTTTCGCGGCACTCCACTGCCGCCAGCGAGCGATTATT AGGTGGGATACGGTAGGATGTAACGATCGGGATAGAACTTTGCGTCCACA CATGGAGCCAGCCATTGTTGACCGACACCGTGCAGGTAATCGAGAAACTC TTGAGTTCCCACTCTCCGGCGTCCTGGCGGTAATCGTGGTCTTTTTTTTT TTTTCGTTTTTCCTGCTCTTGTGTCGTTTTTTTTCGTTTTGTGTGCTTCT CGATGTTTTTTCGAAGTCGTTTACACCTGCCCAAGGCCGATCCTCTGGCG GTGACCACCTCCAAACAGATTGAGAGATACCTGCAGGTATGATGTGTGAT GTATGATGTAAAATGATGGTGGTACGCGAGGACGAAGGTGAATGACAAAA ATCGAAGACATTGACGACGTACCTTGGCATGAAGGTTGGTTGCTTCCATT CGCTATGCAGTCCTTGCAGTCTACGGCGCGGCACCTCTTTATCTCTCCTA CTGGAACGCGGCAAAACTCTTCCTTGAAGTTTTTCACACATATGGCCACG CTCTGTTGTGCCTATCATGGACGTGTCGCAATGTTTCATACTTGCTCAAG CAACGCTTCCCGATCGTCGGAATTGCGTGGTGATTGGTTTTGTTTGTTTC GCCTCTTGCCCACCGGCGGCTGCAGTCGAAGATCAACGTTATTCTCGAGC GAGAGTTGCGAGTGCTCCGGCAAAAAGAGACAGCCGACTTCCGCGGTCGC CGACTACGGGAGATCCAGGAAGCCATCGCAAGGAGGAAGGAGGCTAGACT GTTCGTCATCCAAGAGAAACAAAGGGTATAATGTGCAAAGCCCACCCTCC CACACCCTACCCCTTGCCCTTACTCCCACCCTATGGTACGGCGTAAAACC TTCACGAATGGGCCCGTATTTGACGTGCGCCCCGGTTGCAATGTCTCATC AATGTCATCGATTGTTGGGCATTTCTAGGCAAGGTCGTCGGCAAGGTCCT CACCGCTCGACGACACAGCATAGTGCCAACCTCAACTCGATCTATCTCGC TGCGCACAGCAAGCCTCGAGCGCTTCTCTCTCTGTAACCCTAACCCTGAC CCGCATGCCGTGTAGGCTACGCTAGCGGCGGTTGCGGGCGCTTTTGGCCC TTCCCTCCGATCTCGCGTATGTTCAATCCAGCTTAGAACACTCGGGGTCG CTCGCCTAGACACTTCACCGATAAGAAAAAGCTAGACACTTCACCGATAA GAAAAAACGGCAAGATCTTTTATCTTATCTTCTCATGAAGGCCATTTTTT CTGCAGAGTTTTTTAGAAGAAGGGGGGGGGGGGGTCTAATCTTTTTGCTT GGAACTGCATCTTTTCTCGACTCTTTTTACCACCAGACACGACTGCGAAT GTAGAAGTGGCCTGGACCAGAGGCAAGATTGCGAAAAAATGTTTTTCCCT GACACAGACGACGTCGCAAACCGCTTCTTTTATGGCCTCTTCCTATCCTA CCTTCCTACCTTCCTACCTTCCTACCTTCCTACCTTCTGTTTTCTTCTTG TTTTCTCTTGGCAAGTGCCACATCTCACACCTGTTGTGTGTACCCGATCT CCCTCTTTGTATTGTACGTATGTAGATGATCGAGAACGACAGTCTTAGCC TGGAGCTCATGAAGGTGGACAAGGCAGAGGAGGCCCGCCGGGCTCGACGA GATTGGCTCCGACTCATGAAAGTGTCCCCTGGCATATGGGTTAAAGTCGA GGTCAGAATAGATGGATCTGTGATGAGACGATTTTCTTTTGCCTGCCATT GGTGCTGCTCTGCTGACATGGGTATTTTGCAGAGTGACAAGTATAAGAAT CAGTTATCCTTTTATTTTTTTCTGGTCATCTTAGGGGAGGAATGGTCCTG GATGGTATGGAAAGTTAAAGGATTGGTGATGCGATCATCAGGACTCTGCC TGTCGCTGGAACTGCTTTAGGCCAGCTAGCTTTAGTGATCACGCAAACAT GTCTGAGAATGTGACACGAATCCAATGTAAGCTGGAAGAGACCCCCTCAT GCCATCTAATACACAAGGTATACACCGGACATGGTATCCATTCCACGGAA CATTTCGTCTCCATAGACGACATTCCATAATCAATCCTACAACGGAGTTC TCTCTCCTACGTGGGAGCGTACCATCGGCCAAACTTCACCATAGGAGTCG ACTGACTCTTGAAAAGGCTTGTAACTGCTAAGAGTTGGGTTAAGGATTTA GCTTCACTTGCCGAAGCTGCAAACAGTAGACAGGGTATCATATCATATTA TATCATATCATATCTTATCATAGAGTGGGACTCCTTTCGCGGCGCGTCAC TTGAAACCGACCGCTGCCTGTGGTAACGCACAAGGCAATGCCAGAGAACG CTGTGGCTATCTACCTGTGTGATTGACGAGCTCAAGGCGAAACAGTGTAG ACTGAACTCGTATTACACTCTATCTGGGTTAGGGTTATAACATTTCTCGT TGTCGTGGCACGACTGGCACTACAGTTCTTCACAAGCCTTACGGCGGCGC CTTGAAAGTGCGTTCATGACTTGATCGAGATAAACAAGGTCTCTGTTTCT ACCCTCACGGACTCTGGTTGAGCATACCAAGGCTGAGGAGCGCTCCCCGA CCTCACAGGAAGACGCGAGTCGACAACAAGCGTCTACGGGGTCACCGAAA TCCCCAGGCTCGAGGGGAAAGAAGCCCCGCCCCCGATGGGTGTTCGATAC GAGCAAGACGATTTCCAAGAACGAAGCGGCGGCTCACGACGTGCTAGAGG AGGTGATTACGTGGCCGTGTCACTGTGTTTACATCTAGCTAGCTGGATTA CTCAGGGTATATGCATGTGAACCGGGTACGGTTTGGGTAGTCGCCTCCTG GGTCGCGCGCTGGTCGAAATGGTCCATCTTCCATCTTGCGGTGCAGTAGC GCCGTAGTGCCCTTGGCTTCTAGTACGGAGTAGAGTTTGTTTTTTTGCTC TGGATGCACGCCACGCCCTAGGTTTCTCATCCGTCTTGTATATTTCAGGT CATGTCATGTCATGTCATGACTTTACGCGTGACTGCTGCAACACACAACA CTTTCCGGGATATCACCGGCGGCAAGGACGAGCCCAACTCGCGCCGCTTG TCAGACCTCGTGGGAGCTATGTATCCCCACTCCCCACCCAATCAGTCTGG ATCTTCTTCTGCCGACCTCGAGGATATTCTGTGGGTACTTCCGTCCCCAT TGGTATTCACTAGTAGCCCGGTGCCTACAACAACCTGATTCAGGCAGGCA GCAAGTATATACACCCATTTTGTGGATGAATTTTACCGGCATGCTTTATA CCGGAAGGTACTCTATCCTCCGTCCACTTTCCCTTTGGTTTGTCTCAAAA AAATTTGGCATGTACCCGACCAAAACAAAACAAAAATATGTTATGTATAT TCTTTGAAAACAAAAAAACAGGCCCGACAGGTGGAGGCATTCATCCTGAA CGGCAGGCAAAAACTGAAGATTCTCGCCCCTCGCTGGCGCGCCATTACTG GCAAGCGATTGCTGCGCCTGGAACACGGGCAGCGCCTGGGAATGTCGGCA GAGAAGAAGGGTCAGGCGGGGATAAGGCGACAACGGGGCGAGTCTGGTGG CGACGCCGAGGACGGTGGTCCTCTTTTGAGCGGGCTCGACGAGGAAGGGA GCGATGTCAGTAGAAGTAGCGACGATGGGGGGTGAAACACAAATTGACAA ATTGATACCATACAGGGGTGTTTTTTTGTGTTGGTTGGTTCATGTCATGT CGTTGTCGTTGTCCTTATCGTTGTTGCTGTTTTTTTGTGTTGAGCGGTTC GAACCTACTGCCTTGAACGATTCGGGTCGCAGGTAAGTTATACTATACAA TTGTATCAAATCGTTGCCCTTGTCAGTTTGGGTGCATAGCCCGGCGATCG TCGGCGTCTTGTAAGTATTTGATGGATGGCTGTGGTGCAAAGCAGAACAG CTGTGGTGCAAAGCAGAAC
back to top

Coding sequence (CDS) from alignment at P-lacustris_contig10:200018..215186-

>mRNA_P-lacustris_contig10.83.1 ID=mRNA_P-lacustris_contig10.83.1|Name=mRNA_P-lacustris_contig10.83.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2700bp|location=Sequence derived from alignment at P-lacustris_contig10:200018..215186- (Pleurocladia lacustris SAG_25_93)
ATGAAAAAAAAGCATCCCGATGACAACACGACAACAGCGATGAAGCCAGG
AGCAAGTCGTTTCGGAGCGTTTTTGGACTGGTTCGACGACTACGAGACCA
GGAAGGCGTGTACGGCCCCCTACTTCTCCGATTACGGGGGCGACTTGCCT
GGAGAGTGCTACCGGATGGGGGCAGATCTCATATGAAAAAAAAGCATCCC
GATGACAACACGACAACAGCGATGAAGCCAGGAGCAAGTCGTTTCGGAGC
GTTTTTGGACTGGTTCGACGACTACGAGACCAGGAAGGCGTGTACGGCCC
CCTACTTCTCCGATTACGGGGGCGACTTGCCTGGAGAGTGCTACCGGATG
GGGGCAGATCTCATAGAAATCGATGAGCTCCTTCGTAACGGGGCTAACCC
CAACGTGGGACGCGAACAAGACAACGGGCTAACCCCCATACACTTCGCAG
CCAGAGAAATCGATGAGCTCCTTCGTAACGGGGCTAACCCCAACGTGGGA
CGCGAACAAGACAACGGGCTAACCCCCATACACTTCGCAGCCAGGTTTGG
GGACGTGGAGCTTCTCACGATGCTCAAGCGGGCGGGAGGAAACCTGGACG
TCACCAATGCGCTGGGTCTCACACCTCTATCGTACTCCTGCGCTTTCAAG
CTCTCCCTGAGCAAGATATCCGAAGATTCCCGGGAGCGCCAGCAGGTTTG
GGGACGTGGAGCTTCTCACGATGCTCAAGCGGGCGGGAGGAAACCTGGAC
GTCACCAATGCGCTGGGTCTCACACCTCTATCGTACTCCTGCGCTTTCAA
GCTCTCCCTGAGCAAGATATCCGAAGATTCCCGGGAGCGCCAGCAGGCAG
ACGCGATACGATGGCTGCTGGATAAGGGCGCGAATCCCAATCACGTGGAC
AAAGCGGGCTACACCCCTCTGGCCTGGGCTTGCCGGAGCGGGCTGTATCT
GGTGGTGGTTGCGCTTGTCGAAGCAGGGGCGGACGTCATGCAGCGAAGGC
CGAACCTTCCCGGCGGAAGGCAGACGCGATACGATGGCTGCTGGATAAGG
GCGCGAATCCCAATCACGTGGACAAAGCGGGCTACACCCCTCTGGCCTGG
GCTTGCCGGAGCGGGCTGTATCTGGTGGTGGTTGCGCTTGTCGAAGCAGG
GGCGGACGTCATGCAGCGAAGGCCGAACCTTCCCGGCGGAAGTCGTTTAC
ACCTGCCCAAGGCCGATCCTCTGGCGGTGACCACCTCCAAACAGATTGAG
AGATACCTGCAGTCGTTTACACCTGCCCAAGGCCGATCCTCTGGCGGTGA
CCACCTCCAAACAGATTGAGAGATACCTGCAGTCGAAGATCAACGTTATT
CTCGAGCGAGAGTTGCGAGTGCTCCGGCAAAAAGAGACAGCCGACTTCCG
CGGTCGCCGACTACGGGAGATCCAGGAAGCCATCGCAAGGAGGAAGGAGG
CTAGACTGTTCGTCATCCAAGAGAAACAAAGGTCGAAGATCAACGTTATT
CTCGAGCGAGAGTTGCGAGTGCTCCGGCAAAAAGAGACAGCCGACTTCCG
CGGTCGCCGACTACGGGAGATCCAGGAAGCCATCGCAAGGAGGAAGGAGG
CTAGACTGTTCGTCATCCAAGAGAAACAAAGGATGATCGAGAACGACAGT
CTTAGCCTGGAGCTCATGAAGGTGGACAAGGCAGAGGAGGCCCGCCGGGC
TCGACGAGATTGGCTCCGACTCATGAAAGTGTCCCCTGGCATATGGGTTA
AAGTCGAGATGATCGAGAACGACAGTCTTAGCCTGGAGCTCATGAAGGTG
GACAAGGCAGAGGAGGCCCGCCGGGCTCGACGAGATTGGCTCCGACTCAT
GAAAGTGTCCCCTGGCATATGGGTTAAAGTCGAGGAAGACGCGAGTCGAC
AACAAGCGTCTACGGGGTCACCGAAATCCCCAGGCTCGAGGGGAAAGAAG
CCCCGCCCCCGATGGGTGTTCGATACGAGCAAGACGATTTCCAAGAACGA
AGCGGCGGCTCACGACGTGCTAGAGGAGGAAGACGCGAGTCGACAACAAG
CGTCTACGGGGTCACCGAAATCCCCAGGCTCGAGGGGAAAGAAGCCCCGC
CCCCGATGGGTGTTCGATACGAGCAAGACGATTTCCAAGAACGAAGCGGC
GGCTCACGACGTGCTAGAGGAGGCCCGACAGGTGGAGGCATTCATCCTGA
ACGGCAGGCAAAAACTGAAGATTCTCGCCCCTCGCTGGCGCGCCATTACT
GGCAAGCGATTGCTGCGCCTGGAACACGGGCAGCGCCTGGGAATGTCGGC
AGAGAAGAAGGGTCAGGCGGGGATAAGGCGACAACGGGGCGAGTCTGGTG
GCGACGCCGAGGACGGTGGTCCTCTTTTGAGCGGGCTCGACGAGGAAGGG
AGCGATGTCAGTAGAAGTAGCGACGATGGGGGGTGAGCCCGACAGGTGGA
GGCATTCATCCTGAACGGCAGGCAAAAACTGAAGATTCTCGCCCCTCGCT
GGCGCGCCATTACTGGCAAGCGATTGCTGCGCCTGGAACACGGGCAGCGC
CTGGGAATGTCGGCAGAGAAGAAGGGTCAGGCGGGGATAAGGCGACAACG
GGGCGAGTCTGGTGGCGACGCCGAGGACGGTGGTCCTCTTTTGAGCGGGC
TCGACGAGGAAGGGAGCGATGTCAGTAGAAGTAGCGACGATGGGGGGTGA
back to top