mRNA_P-lacustris_contig108.682.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig108.682.1
Unique NamemRNA_P-lacustris_contig108.682.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 4.720e-88
Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 541
            YSDD+FSGSYISTIGIDFKIKTV LMGKKAKLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSFKNVGNWMRQI+ NA+PDVNVT+VGNK DV++++R VS EQGQRLAA HG+ VRFFETSARSNVNVTEAFEGLATDVI RL++QDEASL  V  L+L  E+P   +K   CC
Sbjct:   31 YSDDQFSGSYISTIGIDFKIKTVFLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQAQDEASLARVAPLKLGQEEP---TKKSDCC 207
[Close]
BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 2.940e-70
Identity = 121/155 (78.06%), Postives = 136/155 (87.74%), Query Frame = 2 
Query:   77 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 541
            MGKKAKLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSF+NVGNWMRQI+ NA+PDVNVT+VGNK DV++ +R VSFEQGQRLAA HG+ VRFFETSARSNVNVTEAFEGLATDVI RL++QDEASL  V  L+L  E+  S  K+D CC
Sbjct:    1 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQTQDEASLARVAPLKLGQEE--STEKSD-CC 152
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BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)

HSP 1 Score: 208 bits (530), Expect = 2.410e-60
Identity = 105/180 (58.33%), Postives = 138/180 (76.67%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 541
            YSDD F+ S+I+TIGIDFK+KT+ + GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  ++GNKCDV   +R V+ +QG+ LAA +G  V+FFETSA+SN+NV EAF  +A DV KRL   +   L      +++ +D  +D  +DGCC
Sbjct:   30 YSDDTFTSSFITTIGIDFKVKTIDVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLDVANERKIKLDD-HADRTSDGCC 206
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BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.390e-59
Identity = 103/180 (57.22%), Postives = 136/180 (75.56%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 541
            YSDD F+ S+I+TIGIDFK+KT+ + GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  ++GNKCDV   +R V+ EQG+ LA  +G  V+FFETSA+SN+NV EAF  +A DV KRL   +          R++ ++  S + ++GCC
Sbjct:   31 YSDDSFTTSFITTIGIDFKVKTIEVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRSDVANQTRIKLDEQNSRAASEGCC 208
[Close]
BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM)

HSP 1 Score: 198 bits (503), Expect = 2.230e-56
Identity = 99/180 (55.00%), Postives = 131/180 (72.78%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 541
            YSDD F+ S+I+TIGIDFK+KT+ + GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+N+ NWM QI+ NAS +VN  ++GNKCDV   +R V+ +QGQ LA   G  ++FFETSA+SN N+ EAF  +A D+ KRL   +   L      + R ++ +  +K D CC
Sbjct:   30 YSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFG--IKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLDVANGSKFRVDESQEQAK-DSCC 206
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BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A024GI55_9STRA (Ion_trans domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GI55_9STRA)

HSP 1 Score: 203 bits (517), Expect = 7.360e-54
Identity = 101/180 (56.11%), Postives = 131/180 (72.78%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 541
            YSDD F+ S+I+TIGIDFK+KT+ L GK+ KLQIWDTAGQERFR IT+AYYRG+MGIL+VYDV+D+ SF+N+ NWM QIK NAS +VN  ++GNKCDV   +R V+ +QGQ LA   G  + FFETSA+SN+N+  AF  +A D+ +RL   D+  L      + R  D +S+   DGCC
Sbjct:  459 YSDDSFTTSFITTIGIDFKVKTINLNGKRIKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIGNKCDVDSSERAVTTQQGQELADEFG--IHFFETSAKSNINIDAAFHAIAVDIQQRLAEGDQDRLDVANGTKFRV-DEQSEESNDGCC 635
[Close]
BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: W7U3B0_9STRA (Rab8-family small gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3B0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.030e-53
Identity = 96/159 (60.38%), Postives = 125/159 (78.62%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQG 478
            YS+D F+ S+I+TIGIDFKIK++ L  KK KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DE+SF NV NWMRQI+ +AS  VN  ++GNKCDV   DR VS EQG++LA  +  +++FFETSA+ NVNV EAF  +A D+  R++++ + +  G
Sbjct:   36 YSEDSFTPSFITTIGIDFKIKSLPLEDKKLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANVKNWMRQIEQHASESVNKILIGNKCDVDPADRRVSLEQGRKLAEEY--RIKFFETSAKENVNVDEAFYTVARDIALRIDNEVDLTASG 192
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BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: UPI0019633F59 (ras-related protein Rab-13 n=2 Tax=Polypteridae TaxID=8289 RepID=UPI0019633F59)

HSP 1 Score: 189 bits (480), Expect = 3.790e-53
Identity = 92/152 (60.53%), Postives = 125/152 (82.24%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQ 457
            +++D F+ +YISTIGIDFK+KTV + GKK KLQ+WDTAGQERF+ IT+AYYRG+MGI+LVYD++DEKSF+N+ NWM+ IK NAS  VN  ++GNKCD+ +  R+VS E G++LA  HG  +RFFETSA+S++NV EAF GLA D++++ E +
Sbjct:   28 FAEDNFNSTYISTIGIDFKVKTVDVDGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVNQMLLGNKCDI-ESRRKVSKEVGEKLAKDHG--IRFFETSAKSSLNVEEAFLGLARDILQKNEKK 176
[Close]
BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A7S0RYT5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RYT5_9CHLO)

HSP 1 Score: 189 bits (480), Expect = 5.870e-53
Identity = 95/160 (59.38%), Postives = 125/160 (78.12%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGV 481
            +S+D F+ S+I+TIGIDFKIK V++ GK  KLQIWDTAGQERFR ITSAYYRG+MGILLVYDV+DE SF N+ NWMR I+ +AS +VN  +VGNK D++DD R VS+ +G+ LA  +G  ++FFETSA+ NV+V E F  +A DV++RL S+ ++  Q V
Sbjct:   31 FSEDSFTSSFITTIGIDFKIKKVMIDGKLVKLQIWDTAGQERFRTITSAYYRGAMGILLVYDVTDEASFNNIRNWMRNIEQHASDNVNKILVGNKLDMADDKRAVSYSKGKALADEYG--IQFFETSAKDNVHVEEVFLAIAKDVMRRLASEQDSQQQQV 188
[Close]
BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A6A4VJM6_AMPAM (Ras-related protein Rab-8A n=4 Tax=Thoracicalcarea TaxID=2899756 RepID=A0A6A4VJM6_AMPAM)

HSP 1 Score: 188 bits (478), Expect = 1.010e-52
Identity = 96/173 (55.49%), Postives = 133/173 (76.88%), Query Frame = 2 
Query:    2 YSDDEFSGSYISTIGIDFKIKTVLLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSD 520
            +S+D F+ ++ISTIGIDFKI+T+ L GKK KLQIWDTAGQERFR IT+AYYRG+MGILLVYD++ +KSF N+ NW+R I+ +AS DV   ++GNKCD++D  R+VS E+G+ LA  +G  ++F ETSA+S++NV EAF  LA D+  ++E + E+S Q   + +LR E PK +
Sbjct:   28 FSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDITSDKSFDNIKNWIRNIEEHASADVEKMILGNKCDMNDK-RQVSRERGEELANEYG--IKFLETSAKSSINVEEAFFTLARDIKAKMEKKLESSNQAKTSHQLRDEAPKKN 197
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUS8_9PHAE4.720e-8879.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FME1_ECTSI2.940e-7078.06Rab8B, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A067CHF2_SAPPC2.410e-6058.33Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
A0A485LS68_9STRA1.390e-5957.22Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=... [more]
H3G925_PHYRM2.230e-5655.00Uncharacterized protein n=19 Tax=Oomycota TaxID=47... [more]
A0A024GI55_9STRA7.360e-5456.11Ion_trans domain-containing protein n=1 Tax=Albugo... [more]
W7U3B0_9STRA1.030e-5360.38Rab8-family small gtpase n=2 Tax=Monodopsidaceae T... [more]
UPI0019633F593.790e-5360.53ras-related protein Rab-13 n=2 Tax=Polypteridae Ta... [more]
A0A7S0RYT5_9CHLO5.870e-5359.38Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A6A4VJM6_AMPAM1.010e-5255.49Ras-related protein Rab-8A n=4 Tax=Thoracicalcarea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig108contigP-lacustris_contig108:135683..143930 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.4
Seed ortholog evalue7.1e-59
Seed eggNOG ortholog2880.D7FME1
KEGG koko:K07901
KEGG Pathwayko04144,ko04152,ko04530,ko04972,map04144,map04152,map04530,map04972
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0078@1,KOG0078@2759
Ec32 ortholog descriptionRab8B, RAB family GTPase
Ec32 orthologEc-05_001110.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04031,ko04131,ko04147
Exons5
Model size1771
Cds size468
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815355.9153888-UTR-P-lacustris_contig108:135682..1369091622815355.9153888-UTR-P-lacustris_contig108:135682..136909Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig108 135683..136909 -
1693493496.5445657-UTR-P-lacustris_contig108:135682..1369091693493496.5445657-UTR-P-lacustris_contig108:135682..136909Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig108 135683..136909 -
1622815356.0056913-UTR-P-lacustris_contig108:142564..1425951622815356.0056913-UTR-P-lacustris_contig108:142564..142595Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig108 142565..142595 -
1693493496.6050107-UTR-P-lacustris_contig108:142564..1425951693493496.6050107-UTR-P-lacustris_contig108:142564..142595Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig108 142565..142595 -
1622815356.016183-UTR-P-lacustris_contig108:143885..1439301622815356.016183-UTR-P-lacustris_contig108:143885..143930Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig108 143886..143930 -
1693493496.616251-UTR-P-lacustris_contig108:143885..1439301693493496.616251-UTR-P-lacustris_contig108:143885..143930Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig108 143886..143930 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815355.9277124-CDS-P-lacustris_contig108:136909..1370091622815355.9277124-CDS-P-lacustris_contig108:136909..137009Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 136910..137009 -
1693493496.5567396-CDS-P-lacustris_contig108:136909..1370091693493496.5567396-CDS-P-lacustris_contig108:136909..137009Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 136910..137009 -
1622815355.9381962-CDS-P-lacustris_contig108:138465..1385991622815355.9381962-CDS-P-lacustris_contig108:138465..138599Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 138466..138599 -
1693493496.5728886-CDS-P-lacustris_contig108:138465..1385991693493496.5728886-CDS-P-lacustris_contig108:138465..138599Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 138466..138599 -
1622815355.9765694-CDS-P-lacustris_contig108:141232..1413961622815355.9765694-CDS-P-lacustris_contig108:141232..141396Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 141233..141396 -
1693493496.583506-CDS-P-lacustris_contig108:141232..1413961693493496.583506-CDS-P-lacustris_contig108:141232..141396Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 141233..141396 -
1622815355.99047-CDS-P-lacustris_contig108:142494..1425641622815355.99047-CDS-P-lacustris_contig108:142494..142564Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 142495..142564 -
1693493496.5917542-CDS-P-lacustris_contig108:142494..1425641693493496.5917542-CDS-P-lacustris_contig108:142494..142564Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig108 142495..142564 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig108.682.1prot_P-lacustris_contig108.682.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig108 136910..142564 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig108.682.1

>prot_P-lacustris_contig108.682.1 ID=prot_P-lacustris_contig108.682.1|Name=mRNA_P-lacustris_contig108.682.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=156bp
MGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNW
MRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFE
TSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSK
ADGCC*
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mRNA from alignment at P-lacustris_contig108:135683..143930-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig108.682.1 ID=mRNA_P-lacustris_contig108.682.1|Name=mRNA_P-lacustris_contig108.682.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8248bp|location=Sequence derived from alignment at P-lacustris_contig108:135683..143930- (Pleurocladia lacustris SAG_25_93)
ATACAGCGATGACGAGTTCTCGGGATCCTACATTTCCACCATCGGGTATG
TACATACACGTACACGTATCTGCGTACGTCGACTTATGCGTCTACAATAT
GTAAGGTAGTCCGTCCGCTCATCCAATCGATACCTGTGGCATCCTATCGA
GTGGCGTTGGCTGGAACATCTCCTGTCTAGTTGGGAGTCTCAGGAAGCCA
ACGTTCTGCGTGCGTGCTTCTGCGGCCTCCTGAGAGTGAGTTGGAGATGA
TGTAGATAGCGATGGCGTCGAACGGGGGGCTTCCTTTTTTGATCATGATC
ATGGGTATTCCACATCCATACGGTGCGGTAGTCATCGGAGATTCATCGGC
GATGTGTACCCCCTCCCAGACCGGTTTTCGCAACTCGAGATTGCTGCAGA
ATCACAAGGGTGCCTGCCAATGCCGGGACGTTTTCATTGGGAAATGTTCT
TGTACTTGGTTGCCAGCTAAATCGCCTGAAATCGCCTGACTGAGGTGAAT
CGGTCTTGTTTTTTCTGTTTGCGCTCTCTTGGCAGTGGAGCAATCGAAAG
AGCTTTGAAAATCGGTCTAGGGTGAAAGGTGAAGGTGAAGGGGGTATGAC
CTGTCCCATCCCATATTTACATATTTATATGTTTACATATTTACATATTT
ACAATTTACATCTAGCACAGTGCGAGTAGCTAGATGTGTGGTGTCTACTT
GATCTTGTTGCTGACAGGGGGTGTACGGTGTACGGGTGTACCCCGCGAGT
TTGTTGACCAAATGGGGTCCTCAAACAAGCTCATAACCTCCACGTCCTCC
AGTTATCCTGTTCCCACGTGTAAAATATCAGAGGCTGGGCGTTTTGCCCA
TAAACGTATCTTACATTAGCGCGTGGGGATGAGGCGCCATAAGCTGTTTC
AGAGGTACCCAGCCGGGCTGTAGCGCCGCGCCCTGCACCGAAAAGTTTGC
TACTGTACTCGATTTCGATTTCGATTTCGATTTCGATTTCGATTTCGTCC
CTTCAACCTCCGTGATACACCATACACCCCATTTTTCATTTTTTCGATTC
GACTCGCCTCATGTTGCGCAGGGTTGGTTGTGTTTTGCTTTGTTGTCTCC
TTGTGTGCTTTCTTTTTCCACACACGCACGTGGACAGCATGAGGTTTTTT
TAACGCAAGCCGAAGCTCGCTCTGCTGTTTTTCGTGCCCAAGTGTTCGTT
GCTAGCCTAGGAAGATGTACGTGCCTTTTGCCCTCATCCGAAAAACAAAA
CAAAACGACGAATCGCGTTTTTTTAATCGTTTTTTTTATGTGTTCAATCC
AACCCGAATGTCTTTTTCTTGTAATTTCATTAAAGGATTGACTTCAAGAT
CAAAACGGTCTTGTTGATGGGGAAAAAAGCGAAACTGCAGATTTGGGACA
CCGCGGGGCAAGAGCGATTTCGAAACATCACCTCTGGTGAGTTTGAATCG
TTGTTGTTGGTTGGTGCTGCTGCCCCTTGTGGCAATCTTTCGAGTCAATC
TTTTTTGTTCTGGCCTCTCTACCCAGCATCAGTTATCTCTACAAGCATCA
GCACCCACATATCATCATTTGAGACGAGTCTGTCTTGAGCATCAAATGCA
TCAAATGAGAGAACCTATGGTCGGAATTGATGTGTTATGTGGTCTACCAA
GCGTCCAGAACGTCCAGAAAATGGCTCGAGCAAAAGCGAAAGCGAAAGCA
ACAACATCGACAGCGGCAGCGGCAGCAGCAGCACAACAAGTCGGCCGAGC
TGATCGTAAGTGAAACAAAAACGACGAACGGGTGTGCGGTGCCACCTTTG
CAACACGAAAAGATGAGCGTTTTTTAAATTTGGAGCGCGTAGTACGAAGC
TGACCCGGCCAAAATGGCATCACAACGTATCTGCCGTGTGATAAAGGGCA
AAGTCTGGACAGATCTCACACACACACGCACACACCTTCTGTAGCAAGGT
TTGGACAGATCTCAAACGCGCGCACACATCTTTTCCAGCAGTCTTTTTTT
GCTTTTTCTACTCTCTCTCGCGAGTAGCGTAGCAGTGTAGCATACCGCGT
CGGCAGGTTGGCACGCAGTTTACTGTAGAAAACCCCGCCAGCTATCGCCC
GCCGATGTGCGTAACTGGAGCCTGCCGTAATCACGGTAACAACGTCATCG
CAAGCGACTGACTCCATGGTGGGATACAAGGAAGAACACGGGTCTGCACC
GAGATTCAGACAATGCGTCTGCCGTATGCTGCGCAAGATATCCATTTCGC
TGTCAGAAGATTTCACATAATACAGTACACAATAAGGTACACCCTATAGT
ATACAATTCCACGCCCCTCCATCTCGAAATGTTATCTATCGCATGGGTGC
AACATCTCATGCACCATATCACACGGCAGGCCAATGACAATGACTGACAC
TCCTTATCTAGATAAAGAGAAGTGTGTGGCCAGTGGATGACCGACTGCTG
CAGAAAGCCAGGAATGCCGACCGTATGTATGCACGTACGTCTATCCGCCT
ATCTGTTGTATTGGATCTTCTTGCATTCTTGCAGCGTACTACCGAGGGAG
CATGGGCATCTTGCTTGTGTACGACGTCTCCGATGAGAAGTCGTTCAAGA
ACGTCGGCAACTGGATGCGCCAGATCAAGGCAAACGCGTCTCCGGACGTG
AACGTCACCGTGGTGGGCAACAAGTGCGATGTGTCAGACGACGACAGGGT
AAGAGAGTAAGGGAGAGAGAGATGAACGTGCGGAGCGAACAGCAGTACAG
CAGCCGAAGCCAAAAACATGAAACTACCGTAAACCGCTTTGATTTTTCCC
CCCCTATAGTGTCCCCTCCCCCAACCAGGGCCGGAAATCGGGTCGGCGCT
TCGGCGCTCGTGGAAATTTTGGGCGTCCTCGGCGCGAAGCGCTGAAAAAA
GTTTTGGGGGTCGGGCCTGATTCGGCGCGAAGCGCCGAAAATTTTTTGAG
CTGCGCCGAAGACTATACGCCGTTCAGTCCACAATCAGGCGCACAATCCA
CCCGAGAACAGATCTGAAACATCCAAAGGGGGTCGTGGAGTGCGTATGAC
GACACCCCTCCGTCCCCTATGTGCTGCCGCAGCAGAGGTTCCCCATAGGA
ACCCCTCTGTGTGACCCTGGATCGAACCTTCCCCCTTCCCCGGCAGTAAT
TCTCGAGCCTGGAGCAAGCGCTGCTTGCTGAATGGGATGGATATATGGAT
GAAAAAGAAAAGAACATTTTCTTCTTGATGTTTTCATCACGTACGTACGT
TTTTAAGATAATTTGTAGCAAAAACGATGTGTATAAACTGGCTAAATAAA
TGCTCCGAAATGAAGGCAAAGTGCAGGGAAATAGAGTTAAACCCCAAAAA
AGTTTCCCCGGGCCCCTGCCGGGGGCTTCGTCGCTGCGCGCCGAACAGCC
TGCGGCCGATTTCCGGCCCTGCCCCCAACTCGTTTGAGAGAGAATTCAGC
AAAAAAAAATGATTTGCCCCCGGAGGAAAGGCGAAAAAAAAACAGAGAGA
GATCCCCCCCCTTTATCAATTTCCCCCCGGGGTAAGGCCAATTTTTACTC
CGCTTCTGACACCGAATACGCCGTTTTTCATATGCACTGGAGAGAGTGAG
TGTGAAACAATGAACGGATGCATGCAACTGCACATGCAACGTCGATCTTC
GGGTGTTTTATGGCATTGCTGGAGATGTTTTCGTTGTCCATCCCTGAAAT
GAATACGGAACACCATAACGTCCAGCAAAGACGTGCAAAGCATCGAAACA
TCGAAACCATGCTAGGAATTGAGCTCTTTTTGTCTCAAACCAAACTGCTC
TCTAACAGCAGTAAATTGTTCTGTAGGGCGAGGGACGCCAGTCGCTCGTA
TGCGGTTGTTGGCCTTGCGGCGAGGTTAAGGTACGATAAACACGAAAGAG
TCGTCATTATTCCTTAAGCAGATGCCCAAGCTGCCTTCCTGACCGCTACA
GACTTGAAACACGCCCTTCACAATACCTTATCAAACCCATCGCGACTTTA
GCGAGGTTGATACAAAGCGGTTTGTGTGTGCAGCGATTTGTGTTTTTTTG
GCGCCTTCCAGGGATTTCCCCCGGGTATATTTTTGAAAAAAAAATACCTC
CCCTTTATCAATTTAGACCCCGGGGGGCTGTATTTCAAACCTTTTTTCGA
TCCCCTCTCCGGGGGGAAATCAAAGCGGTGTACGGTAGTCAACCGCCGGC
TTAGTGGCTAACTAGTCTGCTGGTTTGGTTTCGGCTTGTGTAAAAGTTAA
TAGCTGCTAGAAGTCGTATAATTTAGTAAAAGTTAAATGGTAAACGTTAC
TAGAAGTCGTGGGGTCCGAGTGACCCCACACTGTGACTTCCGAGGAGGGC
GGAGCTCCCTCTGCCAGCACTACTCTACTAAGCGATCCATCTATTACTAT
TTCACTGCATTTGCGTTCTGGATCTTGAAAAAAAAACACCAGCCTGGGAT
TCGAACACACGCCTAACTCAATCTTTTGTAGCAGCCAAATCAAACAACTA
GATTAGTCAGCGCTCACTAGTCTTATGGTTTTGGCTTGGAAGGTAGGTAG
GCTTGACTGCCTCGCTAGCTATAACAATGATCTCTCGGGTGGCGTTGTTG
TCTTCCCGTTAGGAACCAGTTCTGATCTATACCTGCATCGAGTAGTCTAC
CTCCTCTTCCATGCGGTTTTTTTAAGACAATGGAAGGAATTCCGTGGTAT
GGCCTCACGCCCATACGCAACGAGCAGAGGAGTAACGAAGGAAGGATCTA
CATATTTTCTCAACTCACGTATGCATATATCATGTCTTATTTTTAGACGC
TCGCAACAAGAGAGAGTGGGACGGAGGGAGGGAGGCAGCGGGGGGCGGGG
GCGGGGGAGAGGAGAGAACGATAGGGAAAGAGGGTCAGGGCGCGGGGACC
ACGTTGGTAGACAAAAAAAAACAAAAACAAAATCCCATCACAGAACCCAG
GTACCTCTCCAACCGACACATGGAACCGTCAATACTGAAATACCTAAATC
GCTGACGAGAGGGATGCAACAAACGACGTCGAGATTCCCATGGCGGGGGG
TTGATAACCCTTTTCGTCGTCGGATGGCAAACGGCAACATAAAGCGTACA
GTAGTTGTGTTTCGGTTTATTGTCATATGAAGGATGTGAGTGACTATGCG
CGAATAGATCATAACAAGCTCTGCGATCGTCTCTGAGCTCGGGGCGTAGA
TGAGCCATGCCGACGAAGCACTACGTATCTGTTTTATGGCTGGGAGACAA
ACACATACAACTTTTCATAGGCTCTGTTTTGGATCTCCCGCCTCCTCTCG
TTTTTGTTTTTTTCCGCCGCTTTCCCAAAAGGAAGTGTCTTTTGAGCAGG
GGCAGAGGTTAGCGGCGGGGCACGGGGAGCAAGTACGCTTTTTCGAAACC
AGCGCACGCTCGAACGTGAACGTTACCGAAGCATTTGAAGGTTTAGCCAC
CGACGTTATCAAACGGTGAGTTTATGTGTGTGTTTTGTCATCCCATCCTC
CCATCCCACCTGCTATAAACGTCAACACCAGCCGGGCGGGGTCACACAGG
ACAGGCCACACGGGAAGCTTTTCTTTTCCCATCCAGGTTCCTCATGCGGT
GGTTGTCTTGGTTTTATTCGTTTATTCGTCATGCCGTGGCATGCATGTCA
CTTGTGGTCGCAAAAGGAAAACGAAGGGTTGTTCGTTCGTTCGATCGGTC
CATCCACCCTTTCGTGTCGCTCGTCGATCGGGAAGCCAAATTTTGCAAAT
TTTGGGAGACGAGGTGAGAGAGCGAGAGAGGGGAGGGGAGGAATGAACGA
ACGACGCATAAATACTTGTAGACAAAAGCCGTACTTTCTGTCTTCAACCG
TTGTACATTCCTTGCCTTGTCGTGAGAGTTGTTTTCCGCTGCACCCACGC
CCCCATGAAGAAACAAGAAGAAGGTGTGCGGTCCAAAAGGTCTACCTGAA
AACACTACGGAACTCATGCAAGAACAAAGCTTTTGCGGGTAACCTATCTG
ATTGATACGTTAGTACGAGGCACGCCCATGCTTGCGCGCTTAGCACCGTG
TGTGATTTGTTGCATCGACTGTGCTGAGATTCAAGGCAAGGCAAGAAGAG
GACGCCGCATGTTGCTCGTCCTCTGCGCTTCGTTGTGTCTTCATGTGTTT
TATTCATTTGGCATGGACCGGACCATGCCCGGCTGACCAATGAACAACGA
ACAAGTCGCTGATCTTCGTGTTCGTGCGTGTGTTGTTGAGCGTCAAAGAT
CAACAGCTGTACTGCTGTACGTCGCAAGCCAGGCCCATTCATCCATCCCA
TTTTCCATATTCAACGGGGGTCCCCCCGCGCCAGTTCTTTCCAGCCAAGT
TGGTTGGAGGCAGGGGCTCATGTCCCTCGCCCTTTTATCTCGAACTTTGT
TTTCCTTATTGGGAACCAGCCTGTTTTTTTGGGAGGGGTTTCGGTTTCCC
CCTCCTCAACCTCCCGGCAACTTTGGCTCTGGAGGACCAAATGTTCCCAA
CAGTAGTGCGTAGTCGACCTCAGAGTCCTGAAAATGAAAGTCCTACCATC
TACGGGAGCTATTCGTTAATCTTTGAGAAGTGTGCCATGGACTTCTCGCT
TACTTTAAATGGTGTGACGTTGTACATCCGGCGGTTGACTTCAAGATCAA
ATAACGTGAATAACGTCGGTCGATGAATTACCTCTTGAATGGAAGGAAAA
AAGCCTCCTTTCAACCAGGCTTTCTTTGTTGCAGATTCTGCAATCTATGG
GATACACGTCGAGTGCAGCTGTACAAGGCAGGCTCACGCACACGGCCTAT
TTCTCCACTTCCCCAGAACAGGCAATTCGTAGGTGCACGGCGGTTACACA
CCATGATTGTAGCACGTGATGTTCCAGCTTGTCTTTACAATTGGCCCGTT
CCGTGTGTGTGTTCAATTCAGGCTCGAATCGCAAGATGAAGCCAGCCTTC
AAGGAGTGCCCGCATTAAGACTAAGGCCGGAAGACCCCAAGAGCGACAGC
AAGGCCGACGGCTGCTGCTGACATGGGGGCTTTGGCGTACTGGATTGGGT
TTGGAAAATGGGTTGGGCATTGATGGGTTTGGACAGAGTTTGCTCGCCTT
TACCGGAGGACAATCCATTGCCTGGCGTTAGGCTGTTCGGTTTCGGTTCC
AGCTCTTCGCTGATTGATACTCGGACGGTCGAGGACCGGCAGGGCGGGCG
CTCAAGTTTTGACTTCGCGAATTCCCCCTCCTGCGAACGCCCTGCCGGCT
GCTTTCTTCTGGCTTCTTTTCCTCCGACGGGCTCATATAGGGCTCATATA
CTCATGTGTTATTGGCGAGGAACGGGAATCGTCATTTTTGCTTTTGGCCT
CCTTGCTCGCCTCTATGCCACGTGTAGTCCATGTAGGTGTTCGCGGTTTT
GTTAGCGTACGCCTGCAGGCTCTCTTGCGTTCTTCCTTTTGTTTTATTTT
ATTTTCTACGATTGAATTGGATGGTGTGTGTTTGCCCTCCCCCGTGGTTG
AGCCCCCATCCTTCGCTGCACACGGGGGGGAGGGGGCCGCCACCGACCGG
ATTTGGAGTGTTTTCCGTAAAGGTTTCGTTCAGATGAAGTAGTGGTGTTT
CCAAACTACAATACGGAGTAGTGACGAATCATTTACTTTCGTTGTTGCAT
CTCTCTCTCGCTCTCTCTCCCTCTCCCTATCTTTACTACTTTGGGAAAGG
CTGCTGTTTGATGGGAAGAGTTATCTTCAAACTTATGTACCTATTTTTGT
ATGTAAAAAAACTGTGGGGCGTACGAAACGAAGTGGACATGACTCCTTGA
AAGTAGCCGCTGCTTAGTTTCAGAGGCAAGACCGAAGGGTTTAGGCAGAA
ACTGCGAGCTAAACGGGATGGAACAAAAAGCCGAAACTGTTTGGCGTCTA
GTACACCCGCACCATACTGTAGTGTGGGAACTTTTGATCTACCCTGGGGT
GCACTTAGTTCGACTTACGAATACTGCTTTCCCGTTTGGCATGATGTCTC
GCGATGACGTAGACCGCGTAGATGCGTCGTTTCGGCGGCCGCTGGCGCTC
GCCACGGCGCGCGAGAGGAGCCCCCGCCTCCCGGGAGCGTCCCGGGCGGG
CACAGGGAAGCGGGCGCCACAGGAAAGGAGGAAAACGGACGGAGATTTCG
CAAAACATGGGAGCGTAGAACACGCGAAAGGGAACATGAAACCGCCGTAT
GTTCATGTATGCGACTACCCTGCCTGCTCTAGCTGCTTTTGATGTTCC
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Coding sequence (CDS) from alignment at P-lacustris_contig108:135683..143930-

>mRNA_P-lacustris_contig108.682.1 ID=mRNA_P-lacustris_contig108.682.1|Name=mRNA_P-lacustris_contig108.682.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=936bp|location=Sequence derived from alignment at P-lacustris_contig108:135683..143930- (Pleurocladia lacustris SAG_25_93)
ATGGGGAAAAAAGCGAAACTGCAGATTTGGGACACCGCGGGGCAAGAGCG
ATTTCGAAACATCACCTCTGATGGGGAAAAAAGCGAAACTGCAGATTTGG
GACACCGCGGGGCAAGAGCGATTTCGAAACATCACCTCTGCGTACTACCG
AGGGAGCATGGGCATCTTGCTTGTGTACGACGTCTCCGATGAGAAGTCGT
TCAAGAACGTCGGCAACTGGATGCGCCAGATCAAGGCAAACGCGTCTCCG
GACGTGAACGTCACCGTGGTGGGCAACAAGTGCGATGTGTCAGACGACGA
CAGGCGTACTACCGAGGGAGCATGGGCATCTTGCTTGTGTACGACGTCTC
CGATGAGAAGTCGTTCAAGAACGTCGGCAACTGGATGCGCCAGATCAAGG
CAAACGCGTCTCCGGACGTGAACGTCACCGTGGTGGGCAACAAGTGCGAT
GTGTCAGACGACGACAGGGAAGTGTCTTTTGAGCAGGGGCAGAGGTTAGC
GGCGGGGCACGGGGAGCAAGTACGCTTTTTCGAAACCAGCGCACGCTCGA
ACGTGAACGTTACCGAAGCATTTGAAGGTTTAGCCACCGACGTTATCAAA
CGGAAGTGTCTTTTGAGCAGGGGCAGAGGTTAGCGGCGGGGCACGGGGAG
CAAGTACGCTTTTTCGAAACCAGCGCACGCTCGAACGTGAACGTTACCGA
AGCATTTGAAGGTTTAGCCACCGACGTTATCAAACGGCTCGAATCGCAAG
ATGAAGCCAGCCTTCAAGGAGTGCCCGCATTAAGACTAAGGCCGGAAGAC
CCCAAGAGCGACAGCAAGGCCGACGGCTGCTGCTGAGCTCGAATCGCAAG
ATGAAGCCAGCCTTCAAGGAGTGCCCGCATTAAGACTAAGGCCGGAAGAC
CCCAAGAGCGACAGCAAGGCCGACGGCTGCTGCTGA
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