prot_P-lacustris_contig108.678.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig108.678.1
Unique Nameprot_P-lacustris_contig108.678.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length229
Homology
[Close]
BLAST of mRNA_P-lacustris_contig108.678.1 vs. uniprot
Match: A0A6H5JHX4_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX4_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 3.870e-62
Identity = 154/230 (66.96%), Postives = 169/230 (73.48%), Query Frame = 0 
Query:    1 MRLIATDYHEERKLARHLLRGVAKRMQLARRELCEGRPEARDGRVADAGKALCRHLYLLASAPPRPAAKPVQNGPTAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGPGDEGDYM--EPVALTMPELSRIGFEVEQSMASARALAGSALSADAMKASPVKMEPTDAVGGVGNGSGNGAAGYAEFSARDLSRAPDSWGMAVHLLPHQAQALSWIRGLAGRGIGGFV 228
            MRLIATDY+EERKLARHLLRGVA R +LARRE CEGRP+ARDGRVADAG A+CRHL LL S+PP                  XXXXXXXXXXXXXXXXXXXXXX     A  P   G     E + LTMPELSRIGFEVEQ    A+AL  +AL+ DA KASPVKME  DA+ G G    NGAAGY EFS+R+LSRAPDSWGMAVHLLPHQ +ALSWIR LAGRG+GG +
Sbjct:  338 MRLIATDYNEERKLARHLLRGVANRTRLARREFCEGRPQARDGRVADAGVAICRHLSLLGSSPPX-----------------XXXXXXXXXXXXXXXXXXXXXXKGPLLASCPSTSGGIGGGEEMELTMPELSRIGFEVEQLTTRAKALVEAALAGDAGKASPVKMEGLDALDGTGI---NGAAGYNEFSSRNLSRAPDSWGMAVHLLPHQEKALSWIRALAGRGLGGVL 547
[Close]
BLAST of mRNA_P-lacustris_contig108.678.1 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.170e-60
Identity = 149/231 (64.50%), Postives = 168/231 (72.73%), Query Frame = 0 
Query:    1 MRLIATDYHEERKLARHLLRGVAKRMQLARRELCEGRPEARDGRVADAGKALCRHLYLLASAPPRPAAKPVQNGPTAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGPGDEGDYM---EPVALTMPELSRIGFEVEQSMASARALAGSALSADAMKASPVKMEPTDAVGGVGNGSGNGAAGYAEFSARDLSRAPDSWGMAVHLLPHQAQALSWIRGLAGRGIGGFV 228
            MRLIATDY+EERKLARHLLRGVA R +LARRELCEGRP+ARDGRVADAG A+CRHL LLAS+P                   XXXXXXXXXXXXXXXXXX         + G G E + +   E V LTMPELSRIGFEVEQ    A+AL  ++L+ DA KASPVK+E   A  G G+   NG AGY EFS+R+LSRAPDSWGMAVHLLPHQA+ALSWIR LAGRG+GG +
Sbjct:  770 MRLIATDYNEERKLARHLLRGVANRTRLARRELCEGRPQARDGRVADAGVAICRHLSLLASSPXXXXXX-------------XXXXXXXXXXXXXXXXXXKGPLLASWSSGGVGGETEAVGGGEEVELTMPELSRIGFEVEQLTTRAKALVEASLAGDAGKASPVKIEGMVASDGPGS---NGVAGYEEFSSRNLSRAPDSWGMAVHLLPHQAKALSWIRALAGRGLGGVL 984
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig108.678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHX4_9PHAE3.870e-6266.96SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
D7FME7_ECTSI1.170e-6064.50Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig108contigP-lacustris_contig108:63645..67061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig108.678.1mRNA_P-lacustris_contig108.678.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig108 60694..68432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig108.678.1 ID=prot_P-lacustris_contig108.678.1|Name=mRNA_P-lacustris_contig108.678.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=229bp
MRLIATDYHEERKLARHLLRGVAKRMQLARRELCEGRPEARDGRVADAGK
ALCRHLYLLASAPPRPAAKPVQNGPTAGGAGGGGKGPLLPSSIAAAAAAA
AAAAAAAAAAEGPGDEGDYMEPVALTMPELSRIGFEVEQSMASARALAGS
ALSADAMKASPVKMEPTDAVGGVGNGSGNGAAGYAEFSARDLSRAPDSWG
MAVHLLPHQAQALSWIRGLAGRGIGGFV*
back to top