prot_P-lacustris_contig107.618.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig107.618.1
Unique Name	prot_P-lacustris_contig107.618.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	256

Homology

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: D8LDI1_ECTSI (Putative subunit of the Anaphase Promoting Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI1_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 7.100e-157
Identity = 220/225 (97.78%), Postives = 223/225 (99.11%), Query Frame = 0

Query:    1 MSYSISPVSQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRDVVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            MSYSISPVSQST+MLSKP KAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRDVVSSVAWTQRGTHLAVGTNTG VQIWDTGNCKKIRTMTGH+NRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSP+LRFGEHTAAVKAIAWSPHQHGILASG
Sbjct:    1 MSYSISPVSQSTRMLSKPGKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRDVVSSVAWTQRGTHLAVGTNTGLVQIWDTGNCKKIRTMTGHSNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPVLRFGEHTAAVKAIAWSPHQHGILASG 225

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A6H5KEQ8_9PHAE (ANAPC4_WD40 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ8_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 1.850e-150
Identity = 219/225 (97.33%), Postives = 222/225 (98.67%), Query Frame = 0

Query:    1 MSYSISPVSQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRDVVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            MSYSISPVSQST+MLSKP KAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRDVVSSVAWTQRGTHLAVGTNTG VQIWDTGNCKKIRTMTGH+NRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSP+LRF EHTAAVKAIAWSPHQHGILASG
Sbjct:  394 MSYSISPVSQSTRMLSKPGKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRDVVSSVAWTQRGTHLAVGTNTGLVQIWDTGNCKKIRTMTGHSNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPVLRFSEHTAAVKAIAWSPHQHGILASG 618

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A7S2DVZ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DVZ1_9STRA)

HSP 1 Score: 358 bits (919), Expect = 1.520e-119
Identity = 174/225 (77.33%), Postives = 194/225 (86.22%), Query Frame = 0

Query:    3 YSISPVS-QSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGR-DVVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            Y +SPV   S ++LS P K KRKIPK+PFKVLDAP LQDDFYLNLVDWS+LNVLAVGLG+CVYLWSACTSKVTKLCDLG+ D V+SVAWTQRGTHLAVGTN G V+IW+   CKK+RTM GHT R+GTMSWNAH+LASGSRDRLI +RDVR   P   KL GHKQEVCGL+WSFD+ QLASGGNDNKLLIW A S++P+ RF EHTAAVKAIAWSPHQHG+LASG
Sbjct:  124 YELSPVGGHSKRLLSTPRKTKRKIPKVPFKVLDAPALQDDFYLNLVDWSALNVLAVGLGSCVYLWSACTSKVTKLCDLGQNDCVTSVAWTQRGTHLAVGTNQGEVEIWEAARCKKVRTMGGHTARIGTMSWNAHTLASGSRDRLIFLRDVRIKNPLISKLAGHKQEVCGLRWSFDETQLASGGNDNKLLIWTAKSSNPLSRFHEHTAAVKAIAWSPHQHGLLASG 348

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A7S2SI29_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SI29_9STRA)

HSP 1 Score: 353 bits (906), Expect = 1.840e-116
Identity = 175/226 (77.43%), Postives = 191/226 (84.51%), Query Frame = 0

Query:    2 SYSISPV-SQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLG-RDVVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            S+S+SP+ + S  +LS P K KRKI K+PFKVLDAP LQDDFYLNLVDWSS+NVLAVGLG+CVYLWSACTSKVTKLCDLG  D V+SV WTQRG HLAVGTN G VQIWD   CKKIR M GH  RVGTM+WNAH LASGSRDRLI  RDVR  E +T KLVGHKQEVCGLKWSFDD+QLASGGNDNKL IWN  ST+P+ RF +HTAAVKAIAWSPHQHG+LASG
Sbjct:  208 SFSLSPIGTASQNLLSSPRKTKRKIAKVPFKVLDAPALQDDFYLNLVDWSSMNVLAVGLGSCVYLWSACTSKVTKLCDLGPEDCVTSVCWTQRGMHLAVGTNHGEVQIWDALKCKKIRMMGGHAARVGTMAWNAHVLASGSRDRLIYQRDVRVPEYYTSKLVGHKQEVCGLKWSFDDQQLASGGNDNKLFIWNVQSTTPVARFTDHTAAVKAIAWSPHQHGLLASG 433

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A7S0L5S1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5S1_9EUKA)

HSP 1 Score: 348 bits (894), Expect = 7.650e-116
Identity = 171/225 (76.00%), Postives = 192/225 (85.33%), Query Frame = 0

Query:    3 YSISPV-SQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRD-VVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            YS+SPV S + ++L  P +A RKIP +P+KVLDAP LQDDFYLNLVDWSSLNVLAVGLG+CVYLWSACTSKVTKLCDLGRD  V+SV+WTQRGTHLAVGT+ G VQIWD   C+  R M GH  RVGT+ W+ H L+SGSRDRLIL RDVR  EPFT KL GHKQEVCGLKWSFD +QLASGGNDNKL IW+AHSTSP+LRF EH+AAVKAIAWSPHQ+G+LASG
Sbjct:  117 YSLSPVGSDAQRVLCSPRRAPRKIPTVPYKVLDAPALQDDFYLNLVDWSSLNVLAVGLGSCVYLWSACTSKVTKLCDLGRDDSVTSVSWTQRGTHLAVGTSMGEVQIWDAAKCQMTRAMAGHQARVGTLCWSGHMLSSGSRDRLILQRDVRVPEPFTNKLSGHKQEVCGLKWSFDGQQLASGGNDNKLYIWSAHSTSPMLRFNEHSAAVKAIAWSPHQNGLLASG 341

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A0M0JSU4_9EUKA (ANAPC4_WD40 domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSU4_9EUKA)

HSP 1 Score: 342 bits (876), Expect = 7.450e-113
Identity = 168/225 (74.67%), Postives = 189/225 (84.00%), Query Frame = 0

Query:    3 YSISPV-SQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLG-RDVVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            Y++SPV S S ++L  P KA RKI  +P+KVLDAP LQDDFYLNLVDWSSLNVLAVGLG CVYLWSACTSKVTKLCDLG  D V+SV WTQRGTHLAVGT+ G VQIWD   C+  RTM+GH  RVGT+ W+ H L+SGSRDRLIL RDVR A+ FT KL GHKQEVCGLKWSFD +QLASGGNDNKL +W+ HSTSP+LRF EHTAAVKAI+WSPHQ+G+LASG
Sbjct:  137 YALSPVGSDSQRVLCSPRKAPRKISTVPYKVLDAPALQDDFYLNLVDWSSLNVLAVGLGTCVYLWSACTSKVTKLCDLGPEDSVTSVNWTQRGTHLAVGTSVGEVQIWDAAKCQTTRTMSGHQARVGTLCWSGHMLSSGSRDRLILQRDVRVADHFTSKLSGHKQEVCGLKWSFDGQQLASGGNDNKLYVWSPHSTSPLLRFNEHTAAVKAISWSPHQNGLLASG 361

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A2R5G7U3_9STRA (Guanine nucleotide-binding protein subunit beta-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7U3_9STRA)

HSP 1 Score: 342 bits (878), Expect = 2.420e-112
Identity = 165/226 (73.01%), Postives = 191/226 (84.51%), Query Frame = 0

Query:    2 SYSISPVS-QSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGR-DVVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            S+++SP+   S  ++S P KAKRKIPK PFKVLDAP LQDDFYLNLVDWSS NVLAVGLG+CVYLWSACTSKVTKLCDLG+ D V+SV WTQRG H+A+GTN G+V++WD   C KIR M+GH  RVG +SW ++ LASGSRDR IL+RDVR    + +KL GHKQEVCGLKWSFDD+QLASGGNDNKL+IWN HSTSP+LRF EHTAAVKAIAW+PHQ+G LASG
Sbjct:  200 SFNMSPIGPNSPNLMSSPRKAKRKIPKTPFKVLDAPALQDDFYLNLVDWSSQNVLAVGLGSCVYLWSACTSKVTKLCDLGQHDWVTSVCWTQRGHHIAIGTNHGYVELWDAAKCSKIRVMSGHGARVGCLSWTSNQLASGSRDRSILLRDVRQPSSYLKKLTGHKQEVCGLKWSFDDQQLASGGNDNKLMIWNHHSTSPVLRFAEHTAAVKAIAWNPHQNGFLASG 425

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A7S0P202_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P202_9EUKA)

HSP 1 Score: 339 bits (870), Expect = 3.360e-112
Identity = 165/225 (73.33%), Postives = 190/225 (84.44%), Query Frame = 0

Query:    3 YSISPV-SQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGR-DVVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            Y++SPV S + ++L  P +  RKIP +P+KVLDAP LQDDFYLNLVDWSSLNVLAVGLG+CVYLWSACTSKVTKLCDLGR D V+SV+WTQRGTHLAVGT+ G VQIWD   C+  R M GH  RVGT+ W+ H+L+SGSRDRLIL RDVR  E FT KL GHKQEVCGLKWSFD +QLASGGNDNKL IW+ HSTSP+LRF +H+AAVKAI+WSPHQ+G+LASG
Sbjct:  120 YALSPVGSDAQRILCSPRRTPRKIPTVPYKVLDAPALQDDFYLNLVDWSSLNVLAVGLGSCVYLWSACTSKVTKLCDLGREDSVTSVSWTQRGTHLAVGTSVGEVQIWDAAKCQTTRVMAGHLARVGTLCWSGHTLSSGSRDRLILQRDVRVQEHFTSKLSGHKQEVCGLKWSFDGQQLASGGNDNKLYIWSPHSTSPMLRFNDHSAAVKAISWSPHQNGLLASG 344

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A812PEX9_9DINO (FZR1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812PEX9_9DINO)

HSP 1 Score: 335 bits (858), Expect = 2.400e-110
Identity = 164/225 (72.89%), Postives = 188/225 (83.56%), Query Frame = 0

Query:    3 YSISPVS-QSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRD-VVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            +S+SPVS QS+++LS P KA RKI K+PFKVLDAPQLQDDFYLNLVDWSS NVL+VGL  CVYLWSACTS+VTKLCDLG D  V+SVAWTQRG HLAVGTN G VQIWD+  C+K+RTM+GH  RVGTM+WN   L++GSRD  IL RDVR   PF  KL GH+QEVCGLKWSFD++QLASGGNDNKL +W+  ST P+L+F  H AAVKAIAWSPHQHG+LASG
Sbjct:  124 FSLSPVSFQSSRLLSTPRKAPRKIAKVPFKVLDAPQLQDDFYLNLVDWSSANVLSVGLSNCVYLWSACTSRVTKLCDLGPDDTVTSVAWTQRGAHLAVGTNKGEVQIWDSTQCRKMRTMSGHLGRVGTMAWNGFVLSTGSRDHHILHRDVRQPAPFMSKLHGHRQEVCGLKWSFDEQQLASGGNDNKLCVWSLKSTEPVLKFNRHQAAVKAIAWSPHQHGLLASG 348

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BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Match: A0A7S3FCF2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FCF2_9EUKA)

HSP 1 Score: 331 bits (848), Expect = 7.540e-109
Identity = 163/225 (72.44%), Postives = 185/225 (82.22%), Query Frame = 0

Query:    3 YSISPV-SQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWSSLNVLAVGLGACVYLWSACTSKVTKLCDLGRD-VVSSVAWTQRGTHLAVGTNTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDVRAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPILRFGEHTAAVKAIAWSPHQHGILASG 225
            +++SPV S S ++L  P K  RKI  +P+KVLDAP LQDDFYLNLVDWSSLNVLAVGLG CVYLWSACTSKVTKLCDLG D  V+SV+WTQRGTHLAVGT+ G VQIWD   C+  R M GH  RVGT+ W+ H+L+SGSRDRLIL RDVR AE +T KL  HKQEVCGLKWSFD +QLASGGNDNKL IW+ HS  P+LRF EHTAAVKAI+WSPHQ+G+LASG
Sbjct:  120 FALSPVGSDSQRVLCSPRKVPRKISTVPYKVLDAPALQDDFYLNLVDWSSLNVLAVGLGTCVYLWSACTSKVTKLCDLGPDDSVTSVSWTQRGTHLAVGTSVGEVQIWDAAKCQSTRKMGGHQLRVGTLCWSGHTLSSGSRDRLILQRDVRVAEHYTNKLSAHKQEVCGLKWSFDGQQLASGGNDNKLYIWSPHSNQPLLRFNEHTAAVKAISWSPHQNGLLASG 344

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig107.618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDI1_ECTSI	7.100e-157	97.78	Putative subunit of the Anaphase Promoting Complex...	[more]
A0A6H5KEQ8_9PHAE	1.850e-150	97.33	ANAPC4_WD40 domain-containing protein n=1 Tax=Ecto...	[more]
A0A7S2DVZ1_9STRA	1.520e-119	77.33	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2SI29_9STRA	1.840e-116	77.43	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]
A0A7S0L5S1_9EUKA	7.650e-116	76.00	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
A0A0M0JSU4_9EUKA	7.450e-113	74.67	ANAPC4_WD40 domain-containing protein n=1 Tax=Chry...	[more]
A0A2R5G7U3_9STRA	2.420e-112	73.01	Guanine nucleotide-binding protein subunit beta-1 ...	[more]
A0A7S0P202_9EUKA	3.360e-112	73.33	Hypothetical protein n=2 Tax=Calcidiscus leptoporu...	[more]
A0A812PEX9_9DINO	2.400e-110	72.89	FZR1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID...	[more]
A0A7S3FCF2_9EUKA	7.540e-109	72.44	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 112..149 e-value: 0.017 score: 24.3 coord: 153..192 e-value: 3.6E-6 score: 36.5 coord: 195..234 e-value: 2.5 score: 14.4 coord: 70..109 e-value: 0.018 score: 24.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 158..192 e-value: 7.0E-6 score: 26.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 160..201 score: 13.115
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 84..118 score: 9.005
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 19..242 e-value: 8.8E-82 score: 276.5
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 82..133 e-value: 7.5E-5 score: 23.0
IPR033010	The WD repeat Cdc20/Fizzy family	PANTHER	PTHR19918	CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED	coord: 13..225
None	No IPR available	PANTHER	PTHR19918:SF1	FIZZY-RELATED PROTEIN HOMOLOG	coord: 13..225
None	No IPR available	SUPERFAMILY	117289	Nucleoporin domain	coord: 24..230
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 179..193
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 63..243 score: 25.576

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig107	contig	P-lacustris_contig107:142439..147312 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig107.618.1	mRNA_P-lacustris_contig107.618.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig107 140333..147347 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig107.618.1 ID=prot_P-lacustris_contig107.618.1|Name=mRNA_P-lacustris_contig107.618.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=256bp
MSYSISPVSQSTKMLSKPTKAKRKIPKIPFKVLDAPQLQDDFYLNLVDWS
SLNVLAVGLGACVYLWSACTSKVTKLCDLGRDVVSSVAWTQRGTHLAVGT
NTGFVQIWDTGNCKKIRTMTGHTNRVGTMSWNAHSLASGSRDRLILMRDV
RAAEPFTQKLVGHKQEVCGLKWSFDDKQLASGGNDNKLLIWNAHSTSPIL
RFGEHTAAVKAIAWSPHQHGILASGVARRIAAFASGTARRPRGSAASTRA
RRCAT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR024977	Apc4_WD40_dom
IPR033010	Cdc20/Fizzy
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom