prot_P-lacustris_contig1065.592.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1065.592.1
Unique Nameprot_P-lacustris_contig1065.592.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length247
Homology
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BLAST of mRNA_P-lacustris_contig1065.592.1 vs. uniprot
Match: D8LL52_ECTSI (Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL52_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 1.780e-124
Identity = 194/241 (80.50%), Postives = 213/241 (88.38%), Query Frame = 0 
Query:    1 MSISGDSWHEVSSETPSGNASDSDRPPQLPXXXXXXXXXXXXXP--RLVISEANVQEGTAGLLLQLRGGLILMFVLAVWVLGALSPLVACALVWVGSPTAYTVLAGLIAAGVYPYVAVGSGEKENGDVGWMAFRHAIPEWGQFWHKSCGRVYEEEGPESWDTMPPTVACYHPHGVFAQGYIFNGSMNKELPQILGLLATALYHAPLFRLVFGRWTGSCAPSSKEVVLDQMKKGLSFGIIPG 239
            MSISGDSWH+VSSETP  N + SD  P   XXXXXXXXXXXXX   RL+IS++NV+EG+AG LL+LRGGL L+FV+ VWV+GAL+PLVACAL+WVGS TAYTVLAGL+AAGV+PYVA GSG KENGDVGW  FRHAIP W Q+WHKSCGRVYE+EGPESWD MPPTV CYHPHGVF QGYI NGSMN+ELP+ILGLLATALYHAPLFRLVFGRW GSCAPSSKEV LDQMKKGLSFGIIPG
Sbjct:    1 MSISGDSWHKVSSETPEDNTNKSDPAPXXXXXXXXXXXXXXXXXXXRLIISDSNVEEGSAGALLRLRGGLTLLFVVVVWVIGALAPLVACALIWVGSRTAYTVLAGLVAAGVFPYVAKGSGSKENGDVGWTEFRHAIPRWSQYWHKSCGRVYEKEGPESWDNMPPTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPG 241
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1065.592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL52_ECTSI1.780e-12480.50Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..97
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 188..210
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1065contigP-lacustris_contig1065:54996..57807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1065.592.1mRNA_P-lacustris_contig1065.592.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1065 53622..61167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1065.592.1 ID=prot_P-lacustris_contig1065.592.1|Name=mRNA_P-lacustris_contig1065.592.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=247bp
MSISGDSWHEVSSETPSGNASDSDRPPQLPPPPPPSQQPQQQQPRLVISE
ANVQEGTAGLLLQLRGGLILMFVLAVWVLGALSPLVACALVWVGSPTAYT
VLAGLIAAGVYPYVAVGSGEKENGDVGWMAFRHAIPEWGQFWHKSCGRVY
EEEGPESWDTMPPTVACYHPHGVFAQGYIFNGSMNKELPQILGLLATALY
HAPLFRLVFGRWTGSCAPSSKEVVLDQMKKGLSFGIIPGDSRGVAF*
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