mRNA_P-lacustris_contig1064.583.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1064.583.1 vs. uniprot
Match: D7FYT2_ECTSI (DUF3752 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT2_ECTSI) HSP 1 Score: 726 bits (1875), Expect = 2.360e-260 Identity = 394/466 (84.55%), Postives = 430/466 (92.27%), Query Frame = 1
Query: 1 MRDITAAKKEEAAKLLVSMLAAAPPLANELGELLDALDEGESVFVDGVRDATLRSQLASFLTALGFADPAGKSGTAFRCSGGGVLQGVAALMDERDLAEPPPLDREAAFKAAKEASLERVVDRLAGAEGMEGVRDEVAGLLDQILGGELVILEGLPDERIRKALTLLFEAVGLKSRTAGDGGEVGYSIPDRGYEDSEMVIKKVIAAYGGKQSRTEDSAEVGRGQSDGPAPRRVPIGPAMPSQAMLAQAKQAAVEYVQQDSSSEDDEDQFGPSVAGKEKRVPSEREDPNRVKRQKREELKRAAEWEKATGVITGRQAALEKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAAKAPKSKAELEAEAAAEELMAKHREARGASLVERHASDAAKAKKAAGGKDGGKKNFSWSREEDFEQRRKFTPQMYEELVQKSHELDSKFSRSISRNFL 1398
M+D+TA +KEEAA+LLVSMLAAAPPLANELGELLDALDEGE+VFV GV+DATLRSQLA+FLTALG A PAGK +FRCSGGGVL+GVAALMDE+DLA+P PLDREAAF +AKE VVDRLAG +GMEGVR+EV GLLDQILGGELV+LEGLPDER+R ALTLLFEA+GLKSRTAGDGGE GY IPDRGYEDSE VIKKVIA YGG+QS+ +DS++ G++DGPAPRR PIGPAMPSQAMLAQA+QAA ++VQ+DSSS+DDEDQFGPS+AGKEKRV SER DPNR KRQKR+ELKRAAEWE ATGVITG QAAL+KAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHA KAPKSKAE+EAEAAAEELMAKHREARGASLVERHASD +KAKKAAGG DGGKK+FSWSREEDFEQR+KFTPQMYEELVQKS ELDSKFSRSISRNFL
Sbjct: 1 MKDLTATEKEEAAQLLVSMLAAAPPLANELGELLDALDEGETVFVGGVKDATLRSQLAAFLTALGLAAPAGKGNKSFRCSGGGVLRGVAALMDEQDLADPLPLDREAAFNSAKE-----VVDRLAGEQGMEGVREEVPGLLDQILGGELVMLEGLPDERVRAALTLLFEAIGLKSRTAGDGGEAGYGIPDRGYEDSEAVIKKVIAEYGGEQSKPKDSSDDEGGENDGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPSIAGKEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGGDGGKKSFSWSREEDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 461
BLAST of mRNA_P-lacustris_contig1064.583.1 vs. uniprot
Match: A0A835YLN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN1_9STRA) HSP 1 Score: 191 bits (484), Expect = 8.240e-50 Identity = 181/529 (34.22%), Postives = 251/529 (47.45%), Query Frame = 1
Query: 31 EAAKLLVSMLAAAPPLANELGELLDALDEGESVFVDGVRDATLRSQLASFLTALGFADPAGKSGTA--FRCS--GGGV---LQGVAALMDERDLAEPP--PLDREAAFKAAKEASLERVVDRLAGAEGMEGVRDEVAGLLDQILGGELVILEGLPDERIRKALTLLFEAVGLKSRTAG---DGGEVGYSIP--------------DRGYEDSEMVIKKVIAAYGGKQSRTEDSAEVGRGQSDGPAPRRVP-----------IGPAMPSQAMLAQAKQAAVEYVQQDSSSEDDEDQFGPSVAGKEKRVPSEREDPNRVKRQKREELKRAAEWEKATGVITGRQAALEKAEAEVGREEWMLVPPKSLGVLGAIKTL-QPTNRKFQTRSARGARADLHAAKAPKSKAELEAEAAAEELMAKHREARGASLVERHAS----------------DAAK--AKKAAG----------------GKDGGKKNFSWSREEDFEQR-RKFTPQMYEELVQKSHELDSKFSRSISRNFL 1398
E+ +LL +ML + P L EL LL+A+D GE+V +DGV +A L+ LA+ L LG + G T+ FR + G G + + +L+D L E P P D A KE +V +A EGMEG+ E+ L+ Q+L GELV++ + D+ +R L +FEA+GL +T DG GY +P ++ E + V+ Y A G +G A P IGP P A+L QA Q + ++ S+ +D GPS + R P+ R P W K T A A REEWM+VPPK+LG+LGA+KTL QPT+RKFQT G++A PK+KA+LE E AAEELMA+HR RG SL + H+ +AA+ A AAG G G F+WSREE EQ+ R+ TPQ Y L++ S LDSKFS+ +++NF+
Sbjct: 127 ESLQLLTAMLCSFPALPTELASLLEAVDAGEAVCLDGVGNAKLKLMLAALLKHLGL-ERHGDDETSLTFRHAETGDGTPSSMSKLCSLLDHHGLVEAPVCPPDATTALAQCKE-----LVAEMAAREGMEGIGGELPALMQQLLSGELVVVSDVGDDTLRDFLVNIFEALGLVLQTRDGDDDGASEGYGLPTSTSTAAGAAAQVEEQYIEACRQAVTLVMDTYVSASEAVAQPAATGEEAGEGGAAAAPPETSPEPKAPRSIGPMRPPAALLEQAAQMSSALAKRPLDSDSSDDDVGPSTSHV--RRPA-RHRPXXXXXXXXXXXXXXXXWTKTPAAGT--------AAASTVREEWMMVPPKNLGILGALKTLAQPTSRKFQT----GSKAGAVPKAVPKTKAQLEEERAAEELMAQHRAMRGPSLADMHSGKSKQQVAKERAQRAREEAARNQAMTAAGVQVTQLGASSAPSRGTGSGAGGSGFAWSREESMEQQHRRMTPQQYRALLETSKGLDSKFSKEVTKNFM 634
BLAST of mRNA_P-lacustris_contig1064.583.1 vs. uniprot
Match: A0A7S3V6G6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6G6_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.150e-8 Identity = 82/326 (25.15%), Postives = 140/326 (42.94%), Query Frame = 1
Query: 406 EVAGLLDQILGGELVILEGLPDERIRKALTLLFEAVGLKSRTAGDGGE-------------------VGYSIPDRGYEDSEMVIKKVIAAYGGKQSRTEDSAEVGRGQSDGPAPRRVPIGPAMPSQAMLAQAKQAAVEYVQQDSSSEDDEDQFGPSVAGKEKRVPSEREDPNRVKRQKREELKRAAEWEKATGVITGRQAALEKAEAEVG---------REEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAAKAPKSKAELEAEAAAEELMAKHREARGASLVERHASDAAKAKKAAGGKDGGKKNFSWSREEDFE 1299
E+ G+++ IL GE++ L G+PDE +R ++ LF VGL + E GY IPD + + + K+ AA G + ++ + A +R +GP++P A +A + SS+D++D GP+ G +KR RA E+ + R+A + A+ + REEWML P + + G + ++ + R+ + R +H AP+ + + + + ++ +EARG SLVE H + KK DGGK ++SWSR+ D +
Sbjct: 312 ELYGIMNMILEGEIICLHGIPDEDLRNSIEKLFTVVGLSREEMVEEAEDSDDERDSDDIDAALKQTNFGYVIPDESSDQFDTIRLKLSAATGACKVFHQNFVQTF-------ATKRT-LGPSLPPP--NASKNVSAFDL----KSSDDEDDDIGPAPLGS-------------TMAKKRNLKGRAMPAEEVNQISMIRKAQMIAAKTGIDTTVLVDGTFREEWMLQPGEHDFLKGVM------SKGIKNRNFKNERNGMHLNTAPEVPLDPKLQKEVDAIIDMQKEARGVSLVEMHRQQKVEEKKDRVAGDGGKGDWSWSRDNDLD 604
BLAST of mRNA_P-lacustris_contig1064.583.1 vs. uniprot
Match: A0A7S3YEG5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEG5_HETAK) HSP 1 Score: 64.3 bits (155), Expect = 5.890e-8 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 979 REEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAAKA-PKSKAELEAEAAAEELMAKHREARGASLVERHASDAA-----------KAKKAAGGKDGGKKNFSWSREEDFE-QRRKFTPQMYEELVQKSHELDSKFSRSISRNFL 1398
REEWM+ P ++ ++ L PTNR FQT+S RG ++ A A P SK + A EE++AKH+E RG SLVERH + K K K KN S+ R+ E +K EL++++ LDS+FSRS+S++FL
Sbjct: 88 REEWMMTPGEAKSLIPG--GLMPTNRTFQTKSLRGKNSEAAAGPALPVSKEQALENARVEEVLAKHKELRGDSLVERHQKEQXXXXXXXXXXXXKGPKVDPRKS---KNISFDRDFLIEGASKKLDKSRAAELMKRAAGLDSRFSRSVSKSFL 235
BLAST of mRNA_P-lacustris_contig1064.583.1 vs. uniprot
Match: K3WPT9_GLOUD (DUF3752 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPT9_GLOUD) HSP 1 Score: 61.6 bits (148), Expect = 1.910e-6 Identity = 109/392 (27.81%), Postives = 166/392 (42.35%), Query Frame = 1
Query: 406 EVAGLLDQILGGELVILEGLPDERIRKALTLLFEAVGLKSRTAGDGGEVGYSIPDRGYEDSEMVIKKVIAAY------GGKQSRTEDSAEVGRGQSDGPAPRRVPIGPAMPSQAMLAQAKQAAVEYVQQDSSSEDDEDQFGPSVAG-KEKRVPSEREDPNRVKRQKREELKRAAEWEKATGVITGRQAALEKAEAEVGREEWMLVPPKSL--------------GVLGAIKTLQPT-------NRKFQTRSARGARADLH-----------AAKAPKSKAEL---------------------EAEAAAEELMAKHREARGASLVERHASDAAKAKKAAGGKDGGKKNFSWSREEDFEQRRKFTPQMYEELVQKSHELDSKFSR-SISRNFL 1398
E+ LL + GE+ ++ G+ ++RIR L LF +GL + G RG S+ + +V G + SR + AE GP+ IGPAMP + A + E S+DD+D GP++ G K RV ER + +R ELK+A EW++A G ITG A K + R+EWM V P+S G A ++ +P + + AR A+ D+ A + S + L EA+ + M + R+ RG SL+E+H A+ KA+G K GK W+RE D RR + ++++ S ++SKF+ +ISR FL
Sbjct: 95 ELITLLQMLDDGEVAVISGIENKRIRSQLKTLFPLLGLTKLSEPKG------FAKRGKAQSDTSLLEVFQRMLTGGNVGDEASRVKRDAE-----RIGPS-----IGPAMPLGGLPGAATSSTYE-------SDDDDDVVGPALPGMKGFRVADERVEAEMARRAL--ELKQA-EWDRARG-ITG-DAKDGKDAPKQTRQEWMTVMPESSFFKDSLAPANRGPPGKPAAFRSKEPAAVDHTWFDAPEERDRARRAKLDMELLGYVRDENKPTASSSSSASRLAATGNQQSGGVNESIVPAANPEADEQMRKQMEQLRQERGPSLLEQHQKRLAEEAKASGNK--GKAQTGWNRERDLTARRGMSNDDAAKILEASRGINSKFTAPTISRQFL 456 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1064.583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1064.583.1 >prot_P-lacustris_contig1064.583.1 ID=prot_P-lacustris_contig1064.583.1|Name=mRNA_P-lacustris_contig1064.583.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=467bp MRDITAAKKEEAAKLLVSMLAAAPPLANELGELLDALDEGESVFVDGVRDback to top mRNA from alignment at P-lacustris_contig1064:8744..24966+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1064.583.1 ID=mRNA_P-lacustris_contig1064.583.1|Name=mRNA_P-lacustris_contig1064.583.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=16223bp|location=Sequence derived from alignment at P-lacustris_contig1064:8744..24966+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1064:8744..24966+ >mRNA_P-lacustris_contig1064.583.1 ID=mRNA_P-lacustris_contig1064.583.1|Name=mRNA_P-lacustris_contig1064.583.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2802bp|location=Sequence derived from alignment at P-lacustris_contig1064:8744..24966+ (Pleurocladia lacustris SAG_25_93)back to top |