prot_P-lacustris_contig997.16260.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig997.16260.1
Unique Nameprot_P-lacustris_contig997.16260.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length327
Homology
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BLAST of mRNA_P-lacustris_contig997.16260.1 vs. uniprot
Match: D7FMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN4_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 4.960e-17
Identity = 57/93 (61.29%), Postives = 64/93 (68.82%), Query Frame = 0 
Query:    2 ELSECTTPHKRRASSWATLQELAADAAQETWDGGG------QGRRAAAAGSDVDIRKTISSPALQQLLSHRGLSNFPASSSSSSSPTSAAGFS 88
            ELSECTTPHK+RASSWATLQ+LAA+ A+ET DG G                 VDIRKTISSPALQQ+LSHRGLS     ++   SPTSAAG S
Sbjct:   13 ELSECTTPHKKRASSWATLQDLAAETAEETLDGMGGXXXXXXXXXXXXXXXXVDIRKTISSPALQQMLSHRGLS-----AALPPSPTSAAGVS 100
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig997.16260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMN4_ECTSI4.960e-1761.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig997contigP-lacustris_contig997:65631..76463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig997.16260.1mRNA_P-lacustris_contig997.16260.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig997 53347..76699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig997.16260.1 ID=prot_P-lacustris_contig997.16260.1|Name=mRNA_P-lacustris_contig997.16260.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=327bp
MELSECTTPHKRRASSWATLQELAADAAQETWDGGGQGRRAAAAGSDVDI
RKTISSPALQQLLSHRGLSNFPASSSSSSSPTSAAGFSLRVCSFCLHARI
TLASDVPRNIQVGREGRLGLVRERGGGILPATAAAVTAGQQCGGSAAGVG
TGSTASNLPSDVSVFNSAVVASAGAPLSPLQLAYMNMNIGVKMGLDLAAR
MGLGGGGTGEARAMPTGMVGSVAAAAALEGRVDGMTTSRNLSFSELQDLD
KQQQQEHRGATGMDIAPAAAASPGGFGIAAAPGSGVEVDDGGGFDAAEFD
KMYGVGGGAGLLFQGHPPSSRRKRAR*
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