prot_P-lacustris_contig996.16249.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig996.16249.1
Unique Nameprot_P-lacustris_contig996.16249.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length279
Homology
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BLAST of mRNA_P-lacustris_contig996.16249.1 vs. uniprot
Match: A0A6H5JZC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC0_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 3.030e-63
Identity = 149/279 (53.41%), Postives = 179/279 (64.16%), Query Frame = 0 
Query:    1 MCLPVEVLEATPGQREVRLSSDVRGYLCSRTERRLLRTGLVTSSIMIGKEKHSVEAVSADGTVVVLDRKYRGPTVAAAGSPGSGPGDATRAAASRSSLRRDRAVSXXXXXXXXX-----REVVEFGDGSEVDEPGANGSDDADRGGRTLLRPRSVSEGASLAGAFTADESTDAAVSE-------------PRVRKD-----WDRLWLPGEIRLFAKLRAVFGDEQPEH-QESEELPSYALYQVVARAKLDLPVTAITSHPRMNFVVVGLSDGTVAALLP 255
            +CLPV V+EATPG+R VRLS+DVRGYLC R E RLLR+GLVTSSI IG E+HSVEA++ DGTV+VLDRKYRGP VA       GPGDA R  A+ +SL R     XXXXXXXXX     +  V+   GS+  EPG +        GR   R    SEG +L    T+                       P+ R++     WDR W P  +R+FAKLRAVFGDE+ E    ++  P +ALYQVVARAKLD+PVTA+TSHPRMNFV+VGLSDGTVAA+LP
Sbjct:  883 LCLPVGVVEATPGRRRVRLSADVRGYLCPRDEGRLLRSGLVTSSIKIGAERHSVEAITGDGTVLVLDRKYRGPAVATE----PGPGDAARMTAASASLPRHNGAXXXXXXXXXXXXXXXQGAVKDHHGSDEREPGGDA-------GREAERTTVHSEGDALHETATSXXXXXXXXXXXXXXXXXXXXXXXPQPREELREPPWDRAWRPNGVRVFAKLRAVFGDERHESGAAAQPPPPFALYQVVARAKLDMPVTAMTSHPRMNFVLVGLSDGTVAAVLP 1150
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BLAST of mRNA_P-lacustris_contig996.16249.1 vs. uniprot
Match: D7FXV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV0_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 9.710e-27
Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 0 
Query:  172 EPRVRKDWDRLWLPGEIRLFAKLRAVFGDEQPEHQESEELPS-YALYQVVARAKLDLPVTAITSHPRMNFVVVGLSDGTVAALLP 255
            E R    WDR W P  +R+FAKLRAVFGD++ E + + + P  +ALYQVVARAKLD+PVTAITSHPRMNFV+VGLSDGTVAA+LP
Sbjct:  769 EERREPRWDRAWRPNGVRVFAKLRAVFGDKRHESEAAAQPPPPFALYQVVARAKLDMPVTAITSHPRMNFVLVGLSDGTVAAVLP 853
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig996.16249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZC0_9PHAE3.030e-6353.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXV0_ECTSI9.710e-2768.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig996contigP-lacustris_contig996:20526..21362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig996.16249.1mRNA_P-lacustris_contig996.16249.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig996 20501..21573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig996.16249.1 ID=prot_P-lacustris_contig996.16249.1|Name=mRNA_P-lacustris_contig996.16249.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=279bp
MCLPVEVLEATPGQREVRLSSDVRGYLCSRTERRLLRTGLVTSSIMIGKE
KHSVEAVSADGTVVVLDRKYRGPTVAAAGSPGSGPGDATRAAASRSSLRR
DRAVSSSSDGGGGGREVVEFGDGSEVDEPGANGSDDADRGGRTLLRPRSV
SEGASLAGAFTADESTDAAVSEPRVRKDWDRLWLPGEIRLFAKLRAVFGD
EQPEHQESEELPSYALYQVVARAKLDLPVTAITSHPRMNFVVVGLSDGTV
AALLPDVKQGQKRSTRGGVNEGSEWVSL*
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