prot_P-lacustris_contig994.16236.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig994.16236.1
Unique Nameprot_P-lacustris_contig994.16236.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length147
Homology
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A6H5KVM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM0_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.510e-22
Identity = 72/127 (56.69%), Postives = 82/127 (64.57%), Query Frame = 0
Query:    1 MFKAPRGRLAVA---TATMVLA--PTAGAFVNPGASSLLH--TTAAHGGARFCCSATGASREFCGARRPNSSS--GGRPARRGGGVRSLQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG 118
            M K  R R AV+   TA +VL   PTA AF++P  SS+L   T     GA+FC    G +          SSS  GGR  R GGGV SL+AE+LPEGGVSPCIIKVVGVGGGG NAVVRMNQQ+IPG
Sbjct:    1 MVKCRRVRRAVSARTTAALVLLVLPTAVAFLHPSISSVLPPATVLCDDGAKFCWLEDGGASSXXXXXXXTSSSVVGGRIGRDGGGVASLRAEILPEGGVSPCIIKVVGVGGGGGNAVVRMNQQTIPG 127          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A7S1D4T8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4T8_CYCTE)

HSP 1 Score: 52.8 bits (125), Expect = 4.550e-6
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   84 VLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG---WNSGASTQTLRRS 131
            V+PEGG+SPC+IKVVGVGGGG NAV RM    + G   W+     Q L RS
Sbjct:   44 VMPEGGLSPCVIKVVGVGGGGCNAVDRMLASKVGGVDFWSINTDAQALGRS 94          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A7S3DP71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DP71_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 7.570e-6
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   80 LQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG 118
            +   ++P+GG+SPC+IKV+GVGGGGSNAV RM   ++ G
Sbjct:   13 MDGALMPDGGLSPCVIKVIGVGGGGSNAVDRMLDTAVGG 51          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A7S1FQ27_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ27_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.260e-5
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   82 AEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG 118
            A V+P+GG+SPC+IKV+GVGGGGSNAV RM +  + G
Sbjct:   25 AAVMPDGGLSPCVIKVIGVGGGGSNAVDRMLETRVEG 61          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A7S2VFT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFT2_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.320e-5
Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   76 GVRSLQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG 118
            G++S    ++P+GG+SPC+I+V+GVGGGG NAV RM + ++ G
Sbjct:   77 GLKSSAEPLMPDGGLSPCVIRVLGVGGGGCNAVDRMLETAVGG 119          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: B7G6W8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6W8_PHATC)

HSP 1 Score: 53.1 bits (126), Expect = 2.380e-5
Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   76 GVRSLQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG 118
            G+RS    ++P+GG+SPC+I+V+GVGGGG NAV RM + ++ G
Sbjct:   88 GLRSSNQPLMPDGGLSPCVIRVLGVGGGGCNAVDRMLETAVGG 130          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A835Z6M0_9STRA (Plastid division protein FtsZ n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M0_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.410e-5
Identity = 44/104 (42.31%), Postives = 54/104 (51.92%), Query Frame = 0
Query:   34 LHTTAAHGGARFCCSATGASR-EFCGA---RRPNSSSGGRPARRGGGVRSLQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG---WNSGASTQTLRR 130
            L   AA  G   CC +  A R +F G    RR +SS     A R         +++PEGG+SPC IKV+GVGGGGSNAV RM +  I G   W+     Q L R
Sbjct:    5 LCVAAAAAGLLHCCGSALAFRSQFTGVGHVRRRSSSRSAAVALRPAAGCVATMQLVPEGGMSPCNIKVIGVGGGGSNAVKRMLETQIEGVEFWSLNTDVQALAR 108          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: B5YNW2_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNW2_THAPS)

HSP 1 Score: 53.1 bits (126), Expect = 2.410e-5
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   77 VRSLQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG---WNSGASTQTLRRS 131
            + S  + ++P+GG+SPC+IKV+GVGGGGSNAV RM    I G   W+     Q L RS
Sbjct:  113 LSSSMSALMPDGGLSPCVIKVLGVGGGGSNAVDRMLDTRISGVEFWSINTDAQALGRS 170          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A7S1ZJZ1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJZ1_TRICV)

HSP 1 Score: 51.6 bits (122), Expect = 2.640e-5
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   74 GGGVRSLQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG 118
            GGGV  L    +P GG+SPC+IKV+GVGGGGSNAV RM   +I G
Sbjct:   87 GGGVSPL----MPLGGLSPCVIKVLGVGGGGSNAVDRMLDTAIGG 127          
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Match: A0A7S2KCL3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCL3_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.150e-5
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   79 SLQAEVLPEGGVSPCIIKVVGVGGGGSNAVVRMNQQSIPG 118
            S    ++PEGG+SPC+IKV+GVGGGGSNA+ RM +  I G
Sbjct:   43 SSNKALMPEGGLSPCVIKVIGVGGGGSNAIDRMLETRIGG 82          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig994.16236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KVM0_9PHAE2.510e-2256.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1D4T8_CYCTE4.550e-656.86Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S3DP71_9STRA7.570e-656.41Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S1FQ27_9STRA1.260e-564.86Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2VFT2_9STRA1.320e-551.16Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B7G6W8_PHATC2.380e-553.49Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A835Z6M0_9STRA2.410e-542.31Plastid division protein FtsZ n=1 Tax=Tribonema mi... [more]
B5YNW2_THAPS2.410e-550.00Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S1ZJZ1_TRICV2.640e-562.22Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2KCL3_9STRA3.150e-560.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig994contigP-lacustris_contig994:61669..63274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig994.16236.1mRNA_P-lacustris_contig994.16236.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig994 61483..70066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig994.16236.1 ID=prot_P-lacustris_contig994.16236.1|Name=mRNA_P-lacustris_contig994.16236.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=147bp
MFKAPRGRLAVATATMVLAPTAGAFVNPGASSLLHTTAAHGGARFCCSAT
GASREFCGARRPNSSSGGRPARRGGGVRSLQAEVLPEGGVSPCIIKVVGV
GGGGSNAVVRMNQQSIPGWNSGASTQTLRRSTSFRKRSRRCKSETT*
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