prot_P-lacustris_contig994.16235.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig994.16235.1
Unique Name	prot_P-lacustris_contig994.16235.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	425

Homology

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BLAST of mRNA_P-lacustris_contig994.16235.1 vs. uniprot
Match: D7G0H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H7_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 8.100e-165
Identity = 263/372 (70.70%), Postives = 301/372 (80.91%), Query Frame = 0

Query:    1 MPLPKSRSNTRISVLTGTQKRSPAKAG----SNESTRLYHLASSGTAGSGGVPGGRPRTLGRNVPLGGLXXXXXXXXXXXXQPIRPFTHPVEECLRAGAAGLGWCLLAWCTGVVLLVLEYARRWGAHRGSLESQHHNDPRWLIFSPFWVGDAVGLLVLVRIVAKVSDVRFAPPSRNRGARRSDGRARSTGSLTDLSGHGSNHXXXXXXXXGG--LMFTPIALEYFPLLQRVVATSVGAFLVLLMLTVHQVLVCLRWGRTADAPGTPGALVIAAPLLLIEGCFLLRVALIRTQGWLSGLTWFLLLLLTMSVALRSDANAKDEASVA---IKSFPWLECLAPLWALDLLYAGVAGYVAANTIAGRFVMAPTQGV 363
            M LPKSRSNTRISVLTGTQK+SPAK G    SNESTRLYHLAS+GT   GG PGGR RTLGRNVPLGG    XXXXX    QP+RP ++PVE+CLRAGAAGLGWCLL+W TGVVLLVLEYA+RWGAHRG+ E ++   P+WL+FSPFWVGD + LLVLVR++AKV+++RF  P+R+RGARR D R+RSTGSL DLSGHGSN         GG  L   PI L+YFPLLQRV+ATSVGAFLVL++ T  QVL+CLRWGR ADAPG P  LV+AAPLLL+E  FLLRV LIRT GWLSGLTW LL  LT+ VALRS AN+ D+A  A   ++S+PWLECLAPLW +DLLYAGVAGYVAANT+AGRFVMAPTQG+
Sbjct:    1 MALPKSRSNTRISVLTGTQKKSPAKVGGGSSSNESTRLYHLASAGT---GGAPGGRRRTLGRNVPLGG--GAXXXXXYGTYQPLRPLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRGTAEPEYDESPQWLVFSPFWVGDGLALLVLVRVMAKVTNIRFVTPARSRGARRGDARSRSTGSLNDLSGHGSN-----AGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVVAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSGDDADGASGGLQSYPWLECLAPLWVVDLLYAGVAGYVAANTMAGRFVMAPTQGL 362

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BLAST of mRNA_P-lacustris_contig994.16235.1 vs. uniprot
Match: A0A6H5L389_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L389_9PHAE)

HSP 1 Score: 466 bits (1199), Expect = 1.990e-158
Identity = 258/371 (69.54%), Postives = 298/371 (80.32%), Query Frame = 0

Query:    1 MPLPKSRSNTRISVLTGTQKRSPAKAG---SNESTRLYHLASSGTAGSGGVPGGRPRTLGRNVPLGGLXXXXXXXXXXXXQPIRPFTHPVEECLRAGAAGLGWCLLAWCTGVVLLVLEYARRWGAHRGSLESQHHNDPRWLIFSPFWVGDAVGLLVLVRIVAKVSDVRFAPPSRNRGARRSDGRARSTGSLTDLSGHGSNHXXXXXXXXGG--LMFTPIALEYFPLLQRVVATSVGAFLVLLMLTVHQVLVCLRWGRTADAPGTPGALVIAAPLLLIEGCFLLRVALIRTQGWLSGLTWFLLLLLTMSVALRSDANAKDEASVA---IKSFPWLECLAPLWALDLLYAGVAGYVAANTIAGRFVMAPTQGV 363
            M LPKSRSNTRISVLTGT K+SPAK G   SNESTRLYHLAS+GT   GG PGGR RTLG+NVPLGG    XXXXXX   QP++P ++PVE+CLRAGAAGLGWCLL+W TGVVLLVLEYA+RWGAHR + E ++   P+WL+FSPFWVGD + LLVLVR++AKV+++RF  P+R+RGARR   R+RSTGSL DLSG GS+         GG  L   PI L+YFPLLQRV+ATSVGAFLVL++ T  QVL+CLRWGR ADAPG P  LVIAAPLLL+E  FLLRV LIRT GWLSGLTW LL  LT+ VALRS AN+ D+A  A   ++S+PW ECLAPLWA+DLLYAGVAGYVAANT+AGRFVMAPTQG+
Sbjct:    1 MALPKSRSNTRISVLTGTHKKSPAKVGGGSSNESTRLYHLASAGT---GGAPGGRRRTLGQNVPLGG--GAXXXXXXGTYQPLQPLSNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRLTAEPEYDESPQWLVFSPFWVGDGLALLVLVRVMAKVTNIRFVTPTRSRGARRGVARSRSTGSLNDLSGPGSS-----AGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTCGWLSGLTWLLLFSLTILVALRSGANSGDDADGASGGLQSYPWRECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGL 361

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig994.16235.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig994.16235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G0H7_ECTSI	8.100e-165	70.70	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L389_9PHAE	1.990e-158	69.54	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 288..306
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..96
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 283..287
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 225..248
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 118..136
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 307..424
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 97..117
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 249..259
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 160..224
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 260..282
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..159
None	No IPR available	TMHMM	TMhelix		coord: 94..116
None	No IPR available	TMHMM	TMhelix		coord: 226..248
None	No IPR available	TMHMM	TMhelix		coord: 137..159
None	No IPR available	TMHMM	TMhelix		coord: 261..283
None	No IPR available	TMHMM	TMhelix		coord: 287..306

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig994	contig	P-lacustris_contig994:55810..57931 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig994.16235.1	mRNA_P-lacustris_contig994.16235.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig994 55810..60862 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig994.16235.1 ID=prot_P-lacustris_contig994.16235.1|Name=mRNA_P-lacustris_contig994.16235.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=425bp
MPLPKSRSNTRISVLTGTQKRSPAKAGSNESTRLYHLASSGTAGSGGVPG
GRPRTLGRNVPLGGLGGAGGGGGYGSYQPIRPFTHPVEECLRAGAAGLGW
CLLAWCTGVVLLVLEYARRWGAHRGSLESQHHNDPRWLIFSPFWVGDAVG
LLVLVRIVAKVSDVRFAPPSRNRGARRSDGRARSTGSLTDLSGHGSNHGS
GSGGSGGGLMFTPIALEYFPLLQRVVATSVGAFLVLLMLTVHQVLVCLRW
GRTADAPGTPGALVIAAPLLLIEGCFLLRVALIRTQGWLSGLTWFLLLLL
TMSVALRSDANAKDEASVAIKSFPWLECLAPLWALDLLYAGVAGYVAANT
IAGRFVMAPTQGVLRAAGSGACGVYGGGGAVNGRSQAAHAGEQGTTGGVP
SLGPASATSGCVDHGVQPRRIPVC*