prot_P-lacustris_contig992.16213.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig992.16213.1
Unique Nameprot_P-lacustris_contig992.16213.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length246
Homology
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: D8LTD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD1_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.400e-76
Identity = 129/188 (68.62%), Postives = 146/188 (77.66%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQRMFTVMETVSSF-GPPEMWRGHNGDVCLGGGGVDVDATMGALALLRSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRILTQKR 187
            MELAL+RADRE+AAHL S+ VGALSYGWPLLRSAFSEVLAR+EWL LIDRILAN  +PELL+AAVVGF+V  R QLLVLES E+AEAFFRRRQS S  DLQR+F VME VSS+   PE   G      +   G DV   M ALALLR  P++FKPLPR+G YP FDGYP FVINYQ E+RQR+  Q+R
Sbjct:  146 MELALQRADRELAAHLKSLSVGALSYGWPLLRSAFSEVLAREEWLCLIDRILANAHQPELLEAAVVGFMVSFRKQLLVLESTEEAEAFFRRRQSPSTSDLQRIFRVMEKVSSYVQQPERLGGQ-----VDSDGADVGEAMAALALLRIAPQEFKPLPRVGPYPFFDGYPQFVINYQAEMRQRVAAQER 328          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A836CHE3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.860e-29
Identity = 85/219 (38.81%), Postives = 112/219 (51.14%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQRMFTVMETVSSFGPPEMWRGHNGDVCLGGGGVDVDATMGALALL-RSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRI------LTQKRRLVEELRQSAAITCRVGAPKREENE 212
            +E ALRR D  +AAHL   G   + YGW LLRS FSEVLA   WL L D I A    P+LL  AVV F + +R  LL   S    EAF+  +Q   V    R+  VM    +   P+     + D        D  A   ++ALL +  P+   PLP+ G YP F+GYP FV+++Q E R+R+      L ++R L E+LR       R  A +REE E
Sbjct:  191 IEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQ---VPGSSRLLHVMNKADASSQPQ----RHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPK-GGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRD------RTRALEREEEE 395          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A024TWH7_9STRA (TBC1 domain family member 31 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWH7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.440e-15
Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQRMFTVMETVSSFGPPEMWRGHNGDVCLGGGGVDVDATMGALALLRSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRILTQK 186
            ++ AL++ D ++ AH  S  +    YGW L+ +AFSEVLAR +WL L D ++A+ D+P LL  AV+ ++ + R  LL   +A   +A F  +Q   V   ++    M  +     P++              VD D +   +         + PLP  G YP F  YP FV++YQ + R RI T++
Sbjct:  596 LDQALQQRDAQLHAHFMSHRITPEDYGWSLVSTAFSEVLARHDWLCLWDNLIAHWDKPSLLWTAVLAYLSQIRNSLLQSTTASAIQASFHHQQPLQV---KQWIVTMHAIQL---PKL--------------VDADDSNDDV---------WFPLPP-GQYPAFTRYPTFVVDYQIQERNRIATEE 751          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A8C8H016_ONCTS (TBC1 domain family member 31 n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8H016_ONCTS)

HSP 1 Score: 85.9 bits (211), Expect = 1.720e-15
Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 0
Query:    5 LRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLL--------VLESAEQAEAFFRRRQSSSVFD-LQRMFTVMETVSSFGPPEMWRGHNGDVCLGGGGVDVDATMGALALLRSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRILTQK------RRLVEELRQSA 197
            L   D+E+  HL   GV +  Y WPLL + FSEVL R EWL L D + +N   P  L  +VV +V   RA LL        +  S   ++ FF  R +  V   ++  + +ME+  +   P                             R++  DF+PL R G YP+F+ YP +++ YQ++ R+RI  Q+      R+ V+ELR  A
Sbjct:  491 LAHHDKELLQHLIDCGVTSQLYVWPLLETLFSEVLTRDEWLKLFDNVFSN--HPAFLLVSVVSYVTCCRAPLLENAPLILSLPPSFSPSQYFFHHRNNLDVSSVIKETYRLMESTPADIHP-----------------------------RNMLDDFQPLTR-GQYPVFNKYPTYIVEYQSQERERIRQQEVDYLRERQAVQELRAKA 666          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: UPI00193A7495 (TBC1 domain family member 31-like isoform X1 n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193A7495)

HSP 1 Score: 85.1 bits (209), Expect = 3.460e-15
Identity = 59/202 (29.21%), Postives = 93/202 (46.04%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQR-MFTVMETVSSFGPPEMWRGHNGDVCLGGGGVDVDATMGALALLRSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRI------LTQKRRLVEELRQ 195
            +E  L   D+++  H     V    Y WPLL++ F+EV  R EWL   D IL+N   P  +   VV +    RA LL  ++ +  + FF  R S  +  + R  + +ME+                        D++        ++S+   FKPLP   AYP+F+ YP F+++YQ   R+RI        ++R++ EEL Q
Sbjct:  577 VENVLAHHDKKLLHHFIKFKVTTQHYAWPLLQTLFTEVFTRAEWLKFFDHILSN--DPSFILYGVVAYCTSCRAALLRTDNGDDIKFFFHNRNSLDLNAVIRETYHLMESTPK---------------------DIE--------IQSLIEPFKPLPNGTAYPVFNKYPKFIVDYQARERERIKKDEIEYLRERKVAEELAQ 747          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A1W0A9R1_9STRA (TBC1 domain family member 31 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9R1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.610e-14
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQRMFTVMETVSSFGPPEMWRGHNGDVCLGGGGVDVDATMGALALLRSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRILTQKRRL 189
            +E  L R D ++  H     + + +YGW L+RS FSEVL+R  WL L D ++   + P  + +AV+ F+  SR+ +L L S    E+FF  +QS    D++ +   +E +                           T    A L + P    PL + G YP+F  YPHFV++YQ E R RI  ++  L
Sbjct:  557 LEKELERRDPQLYLHFVDHNIQSETYGWSLVRSVFSEVLSRSNWLCLWDHLVTAFEDPGRIWSAVLAFLQISRSIILNLSSTVALESFFHTQQS---VDMRLLIEWLEQM---------------------------TFPLPAPLSTDPA-LVPLAK-GNYPVFRQYPHFVVDYQIEERNRIAREEAEL 713          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A7S2WC53_9STRA (TBC1 domain family member 31 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WC53_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.930e-14
Identity = 66/205 (32.20%), Postives = 102/205 (49.76%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDR-PELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQRMFTVMETV--SSFGPPEMWR-GHNGDVCLGGGGVDVDATMGALALLRSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRI------LTQKRRLVEELRQ 195
            +E  L R D+ +  H T+IGV   SY W LLRS FSEVL + EWL L D ++  +D+ P LL+ A V ++   R  LL L   E   AFFR++   +  D++R    +  +  ++ G  E +  GH              ATM             + +P+  +YP F  YP FV++Y+ + R+RI      + ++R LV  +R+
Sbjct:  613 IEKLLERTDKHLLNHFTNIGVTNESYAWVLLRSMFSEVLTKGEWLKLWDHVVFYLDKSPHLLEVACVAYLRYFRNTLLSLRRGEDVAAFFRQQ---NPIDVKRWIKAILRLHKANLGFFENFATGHEKQ----------KATM-------------EFIPKGLSYPSFQHYPKFVVDYEAQERRRIQMEEEDILKRRDLVSSIRE 791          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A139AP24_GONPJ (Rab-GAP TBC domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AP24_GONPJ)

HSP 1 Score: 81.6 bits (200), Expect = 5.250e-14
Identity = 54/175 (30.86%), Postives = 82/175 (46.86%), Query Frame = 0
Query:    9 DREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSV-FDLQRMFTVMETVSSFGPPEMWRGHNGDVCLGGGGVDVDATMGALALLRSVPRDFKPLPRIGAYPLFDGYPHFVINYQTELRQRI 182
            DRE+ AH     V   +Y WPLL++ FS+VL R+EWL++ D IL+N      +Q  VVG++   R  L+ LE A   E FF    S  +   ++  +   ET  +   P                              S    F+P+ R  +YP+F+ YP F+++YQ +LR +I
Sbjct:  753 DRELLAHFMRHRVTTQTYVWPLLKTFFSDVLYREEWLTVWDHILSN--EIGWMQQWVVGYLRAGRGALMALEKASDFEYFFSHPTSVDIPRTIRYAYEQAETTPAQNAP-----------------------------GSYLNPFRPITRGASYPIFNKYPSFIVDYQKKLRDKI 896          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A3R7WQ68_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WQ68_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 7.060e-14
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQRMFTVMETVS 111
            ++ AL++ D ++ AH TS  +    YGW L+ +AFSEVLAR +WL L D ++A  D P LL AAV+ ++ E+RA LL   +A   +A F ++Q   V   +R    M  ++
Sbjct:  147 LDAALQKRDAQLHAHFTSHRITPEEYGWSLVSTAFSEVLARDDWLCLWDNLIAYWDHPSLLWAAVLAYLTENRANLLQQSTASGIQAAFHQQQPMQV---KRWIATMHAIT 254          
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Match: A0A6A5B309_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B309_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 8.460e-14
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 0
Query:    1 MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDRILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDLQRMFTVMETVS 111
            ++ AL++ D ++ AH TS  +    YGW L+ +AFSEVLAR +WL L D ++A  D P LL AAV+ ++ E+RA LL   +A   +A F ++Q   V   +R    M  ++
Sbjct:  231 LDAALQKRDAQLHAHFTSHRITPEEYGWSLVSTAFSEVLARDDWLCLWDNLIAYWDHPSLLWAAVLAYLTENRANLLQQSTASGIQATFHQQQPMQV---KRWIATMHAIT 338          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig992.16213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD1_ECTSI1.400e-7668.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHE3_9STRA3.860e-2938.81Rab-GAP TBC domain-containing protein n=1 Tax=Trib... [more]
A0A024TWH7_9STRA1.440e-1531.72TBC1 domain family member 31 n=2 Tax=Aphanomyces i... [more]
A0A8C8H016_ONCTS1.720e-1531.25TBC1 domain family member 31 n=1 Tax=Oncorhynchus ... [more]
UPI00193A74953.460e-1529.21TBC1 domain family member 31-like isoform X1 n=2 T... [more]
A0A1W0A9R1_9STRA1.610e-1431.22TBC1 domain family member 31 n=1 Tax=Thraustotheca... [more]
A0A7S2WC53_9STRA2.930e-1432.20TBC1 domain family member 31 n=1 Tax=labyrinthulid... [more]
A0A139AP24_GONPJ5.250e-1430.86Rab-GAP TBC domain-containing protein n=1 Tax=Gona... [more]
A0A3R7WQ68_9STRA7.060e-1438.74Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A6A5B309_9STRA8.460e-1438.74Rab-GAP TBC domain-containing protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 1..113
e-value: 3.6E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR19853:SF1TBC1 DOMAIN FAMILY MEMBER 31coord: 2..199
NoneNo IPR availablePANTHERPTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3coord: 2..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..245
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 3..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig992contigP-lacustris_contig992:13991..15411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig992.16213.1mRNA_P-lacustris_contig992.16213.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig992 12217..15924 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig992.16213.1 ID=prot_P-lacustris_contig992.16213.1|Name=mRNA_P-lacustris_contig992.16213.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=246bp
MELALRRADREVAAHLTSIGVGALSYGWPLLRSAFSEVLARQEWLSLIDR
ILANVDRPELLQAAVVGFVVESRAQLLVLESAEQAEAFFRRRQSSSVFDL
QRMFTVMETVSSFGPPEMWRGHNGDVCLGGGGVDVDATMGALALLRSVPR
DFKPLPRIGAYPLFDGYPHFVINYQTELRQRILTQKRRLVEELRQSAAIT
CRVGAPKREENEKEELIEAPTDGRQLDRQLGKPAPPTKRISLRDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf