prot_P-lacustris_contig990.16201.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig990.16201.1
Unique Nameprot_P-lacustris_contig990.16201.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length61
Homology
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BLAST of mRNA_P-lacustris_contig990.16201.1 vs. uniprot
Match: D7FSL8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL8_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 2.380e-7
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0 
Query:   23 KPSFCRDHGHEGMIDPFSKKCTHRDCTKRPSFGVAGTKK 61
            +P FC  H   GMI+   K+C H  CTK+PSFG AG+KK
Sbjct:    2 RPEFCSQHAKPGMINVRKKRCCHPGCTKKPSFGTAGSKK 40
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig990.16201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSL8_ECTSI2.380e-753.85EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig990contigP-lacustris_contig990:21813..21995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig990.16201.1mRNA_P-lacustris_contig990.16201.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig990 21650..21995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig990.16201.1 ID=prot_P-lacustris_contig990.16201.1|Name=mRNA_P-lacustris_contig990.16201.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=61bp
MSSVRSQSGCSKRGTSGVEDSNKPSFCRDHGHEGMIDPFSKKCTHRDCTK
RPSFGVAGTKK
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