prot_P-lacustris_contig99.16184.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig99.16184.1
Unique Nameprot_P-lacustris_contig99.16184.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length96
Homology
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BLAST of mRNA_P-lacustris_contig99.16184.1 vs. uniprot
Match: D8LNR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR8_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.620e-36
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0 
Query:    1 MRVVASAAARALAKAARRTARPGQIGENVSDGAAGRTMAATRMRAINTATGIQTHIGAAAVLVSNLTMISCSSSVAPTFLEXXXXXXXXXXXRRN 95
            MR+ ASAAARA AKAARRTARPGQIGE VS G AGRTMAATRMRAINTATGIQTH+GAAAVLVS + MISCSSSVAPTFLEXXXXXXXXXXXRRN
Sbjct:    1 MRIAASAAARAFAKAARRTARPGQIGEGVSHGEAGRTMAATRMRAINTATGIQTHVGAAAVLVSKVVMISCSSSVAPTFLEXXXXXXXXXXXRRN 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig99.16184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNR8_ECTSI1.620e-3689.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig99contigP-lacustris_contig99:127252..128533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig99.16184.1mRNA_P-lacustris_contig99.16184.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig99 127252..128533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig99.16184.1 ID=prot_P-lacustris_contig99.16184.1|Name=mRNA_P-lacustris_contig99.16184.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=96bp
MRVVASAAARALAKAARRTARPGQIGENVSDGAAGRTMAATRMRAINTAT
GIQTHIGAAAVLVSNLTMISCSSSVAPTFLEEEEEDEDDDGGRRN*
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