prot_P-lacustris_contig99.16179.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig99.16179.1
Unique Nameprot_P-lacustris_contig99.16179.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length594
Homology
BLAST of mRNA_P-lacustris_contig99.16179.1 vs. uniprot
Match: D8LNR2_ECTSI (Zinc finger, C2H2 type family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNR2_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 4.800e-158
Identity = 336/600 (56.00%), Postives = 378/600 (63.00%), Query Frame = 0
Query:    1 MQHASGRDYDPSAWAKQRQERIKRALQARQKRQSGSPDKNHTFKPQLISSTDGSRSKLPPGARVGDASATQGAYDLTVLETMDGAFPPERTSANIYRDNRYDKDTGGNGRGRGPMDMGEARDSLDRLAVSTTDADRLRLSRSARVGSTNSHSSAVSPPPLPHPTMSASHHDNNRQAGRDYDDGRGRRLVFGEEGGAAVTAKRGSRRRSRDDAGGRWTGPTRESTAVQNG-ACDDFDPATKYGGIEEEALKGAIGRGPAAAAATGDDALSHELKQRPHVRGSASEEHPPDQRQRECDETAWNGV--DNGPSHVGGA--GVQWEGRVGGGGIGEGRENEGAPPEKERDGGEARRQEDEDFFGSLRGGEGVGVGDIRRRGGNGVASCRQPARARHPKRPEWNSDTAAVASLGGPQAAILTDSSAAAVQARRESPFPRRGGVDG-VSTITDSPYAAGXXXXXXXXXXXHSAVPTSGRSNVNVAWEHKHTKTLPWGKRRTSGAGAAVEMASPLRATMVVAGTEAGSEVSVQLLTFHREKDSARSR--------GRAREGYRLQMMPSPSTGSLKAMYRGCREDGRFG---EGGDASVEMESPLPR 583
            MQHASG+DYDPS WAKQRQERIKRALQARQKRQSGSPDKNHTFKP L+SS DG+RSKLPPGARVGDASATQGAYDLTVL+ MDGAFPP+RTSANIYRDNRYDK  GG    RGPMD GE RDSLDRLAVST+D DR RL   AR+GST+S+SSAV+PPPLP PT S S  DNN   G ++   R      GEE      A  G RR  R+D GGRWTGPTRE+ A QNG A  ++DPATK G    +A  G  GR  +AAAATGDDALSHEL+QRPHVRG+ +EEH P Q +   D+        D+GP H GGA        R  GG  GE   N    P + RDG    R E  DF  SLRGGEG   G  R+RGG+ V   RQ ARAR  +RPEWNSDT A ASLG P+AAI+ D+S +AVQ R ES   RR   DG V +I DSPYAAG                TS     N  W+HKHTKTLPWG     G G A+  A       VV G + G     +L  F R   S  +R        G  R GYR QMMPSPSTG+L A YRG  +  RFG   EG +  VE   P  +
Sbjct:    1 MQHASGKDYDPSEWAKQRQERIKRALQARQKRQSGSPDKNHTFKPHLLSSNDGARSKLPPGARVGDASATQGAYDLTVLDNMDGAFPPKRTSANIYRDNRYDKADGGV---RGPMDFGETRDSLDRLAVSTSDVDRQRL---ARMGSTSSYSSAVAPPPLPSPTKSESTQDNN---GSEHTH-RPHAPRAGEE-----AATGGRRRIIREDPGGRWTGPTRETAAAQNGGAYGEYDPATKRGA--GDAFNGEGGR-RSAAAATGDDALSHELEQRPHVRGAIAEEHRPGQPRHGRDDQQGRRTVGDDGPVHAGGAEEAAAATRRYSGGATGE---NGDPHPAEPRDG--IERPEGADFLASLRGGEGAEAGANRQRGGSRVGPGRQAARARRGRRPEWNSDTGAAASLGSPRAAIVADNSPSAVQGRIESSSARRRNTDGAVGSIADSPYAAGGGTIGGSNG-------TSATGGGNATWKHKHTKTLPWG-----GEGEALGEAG------VVGGEDDGGR---ELYGFGRPTASQLARRGPDEGRGGAPRLGYRTQMMPSPSTGNLTAAYRGGGD--RFGGDDEGMNPPVERGVPAEK 554          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig99.16179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNR2_ECTSI4.800e-15856.00Zinc finger, C2H2 type family protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig99contigP-lacustris_contig99:67211..75286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig99.16179.1mRNA_P-lacustris_contig99.16179.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig99 61126..75470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig99.16179.1 ID=prot_P-lacustris_contig99.16179.1|Name=mRNA_P-lacustris_contig99.16179.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=594bp
MQHASGRDYDPSAWAKQRQERIKRALQARQKRQSGSPDKNHTFKPQLISS
TDGSRSKLPPGARVGDASATQGAYDLTVLETMDGAFPPERTSANIYRDNR
YDKDTGGNGRGRGPMDMGEARDSLDRLAVSTTDADRLRLSRSARVGSTNS
HSSAVSPPPLPHPTMSASHHDNNRQAGRDYDDGRGRRLVFGEEGGAAVTA
KRGSRRRSRDDAGGRWTGPTRESTAVQNGACDDFDPATKYGGIEEEALKG
AIGRGPAAAAATGDDALSHELKQRPHVRGSASEEHPPDQRQRECDETAWN
GVDNGPSHVGGAGVQWEGRVGGGGIGEGRENEGAPPEKERDGGEARRQED
EDFFGSLRGGEGVGVGDIRRRGGNGVASCRQPARARHPKRPEWNSDTAAV
ASLGGPQAAILTDSSAAAVQARRESPFPRRGGVDGVSTITDSPYAAGGGT
ISSSNNNNHSAVPTSGRSNVNVAWEHKHTKTLPWGKRRTSGAGAAVEMAS
PLRATMVVAGTEAGSEVSVQLLTFHREKDSARSRGRAREGYRLQMMPSPS
TGSLKAMYRGCREDGRFGEGGDASVEMESPLPRRSSCGVTCPC*
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