prot_P-lacustris_contig989.16173.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig989.16173.1
Unique Nameprot_P-lacustris_contig989.16173.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length386
Homology
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 1.760e-99
Identity = 260/412 (63.11%), Postives = 271/412 (65.78%), Query Frame = 0
Query:    1 MVAIEMCQRASPKSAGAPIRSTSARRGSGATHRSTTGDSSKGEGRGD---RSSVTDDFDDDGDDDLDLSASLWFQTLDKILSAKGAACRSGP-----------------------PSSSALGSQGETEAXXXXXXXXXXXXXRPAAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFDSLRTVVRERHTLKGAGVRVNAVAGIDLHHPRSAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEWPPLPAVPPGVLDAVGSGVISVSSGGVAVVEHLGRGGGDAGSNEGEEGRGNGGDAGGRALAPTAPATSQP--------------------DASASLWRLRAARRRRQARGDKMRSLASWLAGED 366
            MVAIEMCQRASP S+G  + S SARR SGA HRST G             RS + DDFDDDG+  LDLSASLWFQTLDKILSAKGAACRSGP                       P++S  G      A             R AAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLF+SLRTVVRERHTLKGAGVRV+AV G DLH PR A +XXXXXXXXXXXXXXXXXXXXXXXXXXX    P  P VP G+L A+GSGVI VSS GVAVVEHLGRGG                                                     DASASLWRLRAARRRRQARGDKMRSLA W AGED
Sbjct: 2095 MVAIEMCQRASPSSSGGSVGSMSARRASGARHRSTAGXXXXXXXXXXXXXRSPLADDFDDDGE--LDLSASLWFQTLDKILSAKGAACRSGPXXXXXXXXXXXXXXXXXXXXXADPAASVPGXXXXAVAPGRG---------REAAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPPRIA-AXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLAPHHPPVPSGLLGALGSGVIRVSSAGVAVVEHLGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASASLWRLRAARRRRQARGDKMRSLARWSAGED 2494          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: D8LRX1_ECTSI (Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX1_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 9.010e-70
Identity = 177/287 (61.67%), Postives = 182/287 (63.41%), Query Frame = 0
Query:  130 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFDSLRTVVRERHTLKGAGVRVNAVAGIDLHHPRSAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEWPPL-------------------PAVPPGVLDAVGSGVISVSSGGVAVVEHLGRGGGDAGSNEGEEGRGNGGDAGGRALAPTAPATSQPD------------ASASLWRLRAARRRRQARGDKMRSLASWLAGEDPLTSWNAPGGGSGDRVGGT 385
            MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLF+SLRTVVRERHTLKGAGVRV+AV G DLH PR A +           XXXXXXXXXXXXXXXXX                         P VP G+L AVGSGVISVSSGGVAVVEHLGRG             G                                 ASASLWRLRAARRRRQA+GDKMRSLA W AGED         G  GDR  GT
Sbjct:    1 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPPRIAAADGPTRTRNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLALHHPPVPSGLLGAVGSGVISVSSGGVAVVEHLGRGXXXXXXXXXXNDEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASLWRLRAARRRRQAKGDKMRSLARWSAGEDT----GPTRGDGGDRARGT 283          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A7S2GX04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GX04_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.660e-19
Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = 0
Query:  122 ELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFDSLRTVVRERHTLKGAGVRVNAV 219
            ELPQ   ++  VL  ++QRTL  M+ +VPLP IV+K+  DH+G  LGE R ++L+MLDTY+Y+T I+RTA SL+   LR + + R  LK +GV +  +
Sbjct:  415 ELPQHQTILEAVLTEMIQRTLDKMSAFVPLPRIVRKITDDHSGMELGELRDILLSMLDTYTYETNIYRTAVSLVATDLRRLCKRRQRLKCSGVSIRHI 512          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A836CF74_9STRA (Golgi CORVET complex core vacuolar protein 8-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF74_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.350e-13
Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 0
Query:  135 DALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFDSLRTVVRERHTLKGAGVRVNAVAGIDL 224
            D LLQR L  M GYVPLPAIV KV+SDHA + LGEF+ +I +ML   S +T ++R AA LLF   +     R  L  AGVRV A+ G  L
Sbjct: 1073 DILLQRLLEGMTGYVPLPAIVGKVLSDHAQAPLGEFKGLIQSMLVACSRETDVYRAAAVLLFGCAQRARAARRRLARAGVRVCAIDGRGL 1162          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A1D1XH83_9ARAE (Vacuolar protein sorting-associated protein 8 (Fragment) n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XH83_9ARAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.000e-6
Identity = 40/132 (30.30%), Postives = 59/132 (44.70%), Query Frame = 0
Query:   66 SASLWFQTLDKILSAKGAACRSGPPSSSALGSQGETEAXXXXXXXXXXXXXRPAAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFD 197
            S SLWF+ LD            G   S A    G   A             R    EL + + ++  +    ++  +  M GYVPLPAI+ K+++D+ G   G F+  +L +L TY Y+  I  TA SL+ D
Sbjct: 1605 SESLWFRLLDLCCELLRE-LYDGKEISQAKHQGGPLHAASDPPDTKRKSTFRWRFPELNRGSNILRYIFSQFIKEVVEGMVGYVPLPAIMGKLLADNGGQEFGNFKFTLLGLLGTYGYERRILGTAKSLIED 1735          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: UPI001C500AC3 (LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001C500AC3)

HSP 1 Score: 60.8 bits (146), Expect = 3.020e-6
Identity = 43/145 (29.66%), Postives = 66/145 (45.52%), Query Frame = 0
Query:   62 DLDLSASLWFQTLDKILSAKGAACR---------SGPPSSSALGSQGETEAXXXXXXXXXXXXXRPAAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFD 197
            D++ S SLWFQ LD        +C          +G  SSS  G Q + +                   +  ++A ++  V    ++  +  M GYV LP I+ K++SD+     G+F+  IL ML TYS++  I  TA SL+ D
Sbjct: 1707 DIEESESLWFQLLDSFCGPLKDSCDDKIVVEGNPTGMLSSSLFGMQEDKDVLNTWRI-----------SKSKRSAHILRRVFSQFIRMIVDGMIGYVRLPRIMAKLLSDNGSQEFGDFKLTILGMLGTYSFERRILDTAKSLIED 1840          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A443PFM0_9MAGN (Vacuolar protein sorting-associated protein 8 isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PFM0_9MAGN)

HSP 1 Score: 60.5 bits (145), Expect = 3.990e-6
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0
Query:  127 AAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFD 197
            A ++  +L   +Q  +  M GYVPLP I+ K++SD+     G+F+  IL ML TY Y+  I  TA SL+ D
Sbjct: 1717 AHILKRLLSRFIQEIVEGMVGYVPLPTIMAKLLSDNGNQEFGDFKLTILGMLGTYGYERTILDTAKSLIED 1787          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A2I0AWR9_9ASPA (RING-type domain-containing protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AWR9_9ASPA)

HSP 1 Score: 60.1 bits (144), Expect = 5.250e-6
Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query:  123 LPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFD 197
            L  +A ++  +   L+   +  M GY+PLPA++ K++SD+     G+F+  IL ML TY+Y+  I  TA SL+ D
Sbjct: 1690 LKSSAHILRRLFSQLIGEIIEGMTGYLPLPAVMAKLLSDNGNQEFGDFKFTILKMLGTYNYERRILDTAKSLIED 1764          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A388JYZ1_CHABU (Vps8 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JYZ1_CHABU)

HSP 1 Score: 60.1 bits (144), Expect = 5.510e-6
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0
Query:  130 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASL----LFDSLRTVVRER 206
            M  +L  ++ + +S M GYVPLP ++ K+VS H     GEF+  IL +L TY ++ +I +TA +L     F S+  + R R
Sbjct: 2718 MRTLLVGMMGKVMSGMVGYVPLPVLLSKIVSQHGSDQFGEFKATILGLLGTYGFERSILKTAKNLQDGDAFASMHALKRGR 2798          
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Match: A0A843VW62_COLES (RING-type domain-containing protein (Fragment) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VW62_COLES)

HSP 1 Score: 58.9 bits (141), Expect = 1.080e-5
Identity = 27/76 (35.53%), Postives = 46/76 (60.53%), Query Frame = 0
Query:  122 ELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFD 197
            EL + A ++  +L   ++  +  M GYVPLPAI+ K+++++ G   G+F+  +L +L TY Y+  I  TA  L+ D
Sbjct:  412 ELGRGAGLLRSILSQFIKEIVEGMVGYVPLPAIMGKLLAENGGQEFGDFKLTLLGLLGTYGYERRILGTAKLLIED 487          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig989.16173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMF4_9PHAE1.760e-9963.11Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRX1_ECTSI9.010e-7061.67Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A7S2GX04_9STRA4.660e-1946.94Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A836CF74_9STRA4.350e-1352.22Golgi CORVET complex core vacuolar protein 8-domai... [more]
A0A1D1XH83_9ARAE3.000e-630.30Vacuolar protein sorting-associated protein 8 (Fra... [more]
UPI001C500AC33.020e-629.66LOW QUALITY PROTEIN: vacuolar protein sorting-asso... [more]
A0A443PFM0_9MAGN3.990e-640.85Vacuolar protein sorting-associated protein 8 isof... [more]
A0A2I0AWR9_9ASPA5.250e-637.33RING-type domain-containing protein n=1 Tax=Aposta... [more]
A0A388JYZ1_CHABU5.510e-637.04Vps8 domain-containing protein n=1 Tax=Chara braun... [more]
A0A843VW62_COLES1.080e-535.53RING-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 2..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig989contigP-lacustris_contig989:39432..41898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig989.16173.1mRNA_P-lacustris_contig989.16173.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig989 38446..43138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig989.16173.1 ID=prot_P-lacustris_contig989.16173.1|Name=mRNA_P-lacustris_contig989.16173.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=386bp
MVAIEMCQRASPKSAGAPIRSTSARRGSGATHRSTTGDSSKGEGRGDRSS
VTDDFDDDGDDDLDLSASLWFQTLDKILSAKGAACRSGPPSSSALGSQGE
TEAAAAASATAAAGRGRPAAGELPQTAAVMGGVLDALLQRTLSSMAGYVP
LPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFDSLR
TVVRERHTLKGAGVRVNAVAGIDLHHPRSAGSSSSTTSSGVPTGAASGDT
SAIAASAGGGEEWPPLPAVPPGVLDAVGSGVISVSSGGVAVVEHLGRGGG
DAGSNEGEEGRGNGGDAGGRALAPTAPATSQPDASASLWRLRAARRRRQA
RGDKMRSLASWLAGEDPLTSWNAPGGGSGDRVGGT*
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