prot_P-lacustris_contig989.16171.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig989.16171.1
Unique Nameprot_P-lacustris_contig989.16171.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length81
Homology
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BLAST of mRNA_P-lacustris_contig989.16171.1 vs. uniprot
Match: D8LRW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRW7_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 3.070e-37
Identity = 59/80 (73.75%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:    1 MTCKESTFYLLNSCVLLMDHFPCTKCSESYGLEQPCYVEQDAPAENLPGQCLTSSHPSESKCSASHRLTRRLCPCTAAAR 80
            M CKES+F LLNSC LL DHFPCT C+ES G EQPCYVE DAP +NLPGQCL SS+P  S CSASH +TRRLCPCTA+ R
Sbjct:    4 MICKESSFQLLNSCGLLRDHFPCTSCTESNGFEQPCYVELDAPEDNLPGQCLISSNPRHSTCSASHEVTRRLCPCTASGR 83
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BLAST of mRNA_P-lacustris_contig989.16171.1 vs. uniprot
Match: A0A8J9WNA2_9CHLO (Probable alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNA2_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 3.730e-8
Identity = 32/75 (42.67%), Postives = 41/75 (54.67%), Query Frame = 0 
Query:    3 CKESTFYLLNSCVLLMDHFPCTK-CSESYGLEQPCYVEQDAPAENLPGQCLTSSHPSESKCSASHRLTRRLCPCT 76
            C ES F+ +NSC +LM HFPC   C+   G + P YV    P  +    CL +    + +C ASH  T RLCPCT
Sbjct:  462 CTESNFWFINSCEVLMQHFPCESGCAVELGSDIPNYVMD--PNLSTFHSCLIAQQ--QPRCDASHGATARLCPCT 532
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig989.16171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRW7_ECTSI3.070e-3773.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J9WNA2_9CHLO3.730e-842.67Probable alpha-1,3-mannosyl-glycoprotein 2-beta-N-... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig989contigP-lacustris_contig989:11802..12732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig989.16171.1mRNA_P-lacustris_contig989.16171.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig989 10539..28455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig989.16171.1 ID=prot_P-lacustris_contig989.16171.1|Name=mRNA_P-lacustris_contig989.16171.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=81bp
MTCKESTFYLLNSCVLLMDHFPCTKCSESYGLEQPCYVEQDAPAENLPGQ
CLTSSHPSESKCSASHRLTRRLCPCTAAAR*
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