prot_P-lacustris_contig981.16131.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig981.16131.1
Unique Nameprot_P-lacustris_contig981.16131.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length527
Homology
[Close]
BLAST of mRNA_P-lacustris_contig981.16131.1 vs. uniprot
Match: A0A6H5L347_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L347_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 2.280e-195
Identity = 343/520 (65.96%), Postives = 389/520 (74.81%), Query Frame = 0 
Query:   14 MSTAVDTTSLPA-PKTVRELLERVPQTLDAQIPGAFRLDACASTDAMEAMSRAEARLLKSAETFFEPLFRVSLLENLGRNDPFAAPGDEDFPDQPPDRDLEAERRRVDEITDRALSEQPSLKASAERVKDQAGRLQERLKDLTLQVDAAPALISSGSSGNDSGGARLSILDTVYAGADEK-ARETDHQDEETL-RQSAQILSAAEARKAALVKEVAARRADLARQQREVELLEREQQATALXXXXXXXXXX---VAGSAGRRAEASREMENLVGVVGMSAAQLEACVQEEEVLLQRNTGIRDWYEATVSNVELLGGVRVSHRLLFG---GGGVEGIEFMVDLGPGQIMEVTVAAADGRLSSAQLYHSQSNSAAPRGAVGAGGISVSELEELRRVADELPAPQNLRMLLREALSRASCAALREEHVRLVRQRYLTGYRAPSRELTITMGVGIVASFRLHADYPKASHRMNLFPEVVALTGVGGWSANETEQLRRRVNNMALPTLMATMDSLEAAVEAMEPG 524
            MS  VD+ S P  P ++RELLERVPQ L+AQ PGA  + + AS DAME++SRAEARLLKSAETF    F VS+LENLGR DPF  PGDEDFPDQ  D DLEAERRRVDEITDRALSEQ  L++SAERV++QA  LQER+K LTLQV+A PAL SSG       GARLSI+D VYAG D    RE D ++EETL R+ +Q L A EA++  L +  AA RA+L  QQREV+LLEREQ A AL              AGS G RAEASREMENLVGV GM  A+LEAC +EE+ L++RNTGIRDWY ATV+ VE LGGVR+SHRLLFG   GG VEG+EFMV LG G  MEVTV+A DG+LSSAQL H Q       GA G  GIS SELEE+RR AD LPAPQNL  L+ EALSRA+CAA+REEHVR VR+RYLTGYR+PSRE+T+TMG GIVA F L ADYPK         EVVALTGVGGWSA+ET+QL RRVN+MALPTLMATMD LEA VEAME G
Sbjct:    1 MSATVDSASRPTVPTSLRELLERVPQVLNAQSPGALHMQSRASADAMESVSRAEARLLKSAETFHPHTFSVSVLENLGRRDPFIEPGDEDFPDQAADDDLEAERRRVDEITDRALSEQQPLRSSAERVEEQAMHLQERIKGLTLQVEADPALRSSG-------GARLSIMDKVYAGDDRADEREADIRNEETLLREDSQALGAVEAKRTVLAERAAAVRAELLLQQREVDLLEREQHAVALAAAETAATGAGGAAAGSNGWRAEASREMENLVGVAGMPEARLEACEREEDALVRRNTGIRDWYAATVAEVENLGGVRLSHRLLFGAGAGGRVEGMEFMVGLGSGLTMEVTVSAVDGKLSSAQLCHGQGGG----GAAGFAGISPSELEEMRRAADALPAPQNLGKLVIEALSRATCAAVREEHVRQVRRRYLTGYRSPSREVTVTMGAGIVACFHLAADYPKVVGGA----EVVALTGVGGWSAHETKQLCRRVNDMALPTLMATMDVLEAEVEAMEGG 505
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig981.16131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L347_9PHAE2.280e-19565.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..157
NoneNo IPR availableCOILSCoilCoilcoord: 225..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig981contigP-lacustris_contig981:27232..31874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig981.16131.1mRNA_P-lacustris_contig981.16131.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig981 27232..31874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig981.16131.1 ID=prot_P-lacustris_contig981.16131.1|Name=mRNA_P-lacustris_contig981.16131.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=527bp
RVCCTTTRHNGLTMSTAVDTTSLPAPKTVRELLERVPQTLDAQIPGAFRL
DACASTDAMEAMSRAEARLLKSAETFFEPLFRVSLLENLGRNDPFAAPGD
EDFPDQPPDRDLEAERRRVDEITDRALSEQPSLKASAERVKDQAGRLQER
LKDLTLQVDAAPALISSGSSGNDSGGARLSILDTVYAGADEKARETDHQD
EETLRQSAQILSAAEARKAALVKEVAARRADLARQQREVELLEREQQATA
LTAAAAAEGGEVAGSAGRRAEASREMENLVGVVGMSAAQLEACVQEEEVL
LQRNTGIRDWYEATVSNVELLGGVRVSHRLLFGGGGVEGIEFMVDLGPGQ
IMEVTVAAADGRLSSAQLYHSQSNSAAPRGAVGAGGISVSELEELRRVAD
ELPAPQNLRMLLREALSRASCAALREEHVRLVRQRYLTGYRAPSRELTIT
MGVGIVASFRLHADYPKASHRMNLFPEVVALTGVGGWSANETEQLRRRVN
NMALPTLMATMDSLEAAVEAMEPGVI*
back to top