prot_P-lacustris_contig98.16124.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig98.16124.1
Unique Name	prot_P-lacustris_contig98.16124.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	358

Homology

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BLAST of mRNA_P-lacustris_contig98.16124.1 vs. uniprot
Match: A0A6H5JZ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ72_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 8.050e-28
Identity = 112/280 (40.00%), Postives = 139/280 (49.64%), Query Frame = 0

Query:   84 VSRAVRDTLEVTSRRSAMLPASILTCYHLPRSDGANVLGTASTKAKASATNSNSVIGKRKTDGAASXXXXXXXXSRTVDGDEENAIPSPGTRRQSSFREVSATLEEAVSRLMKDFNRARKEVLYGLDEFGRPLE-----GSSRQDGSARP---REPGSPECLETLDDCDMSP-TSSTNVYRWRDDLAVNMGRSAASPAGGGPVRRQVVKASQPMESEGARWRRSGATKDGGSLASPPNHVLVMKERQRLGSSATMARGRFCSASLSFARPLPRSELTTRG 354
            VS+AV  TLE TSRRSA+LPASIL C H    D   ++ T+S             +G         XXXXXXXX                 RRQSS  E +  LEEAVSR+MKD+ RARKEVLYGLD+ GRPLE     G     G   P   REP S E L++L   +  P T S N+   ++ L+          AGG P   +  + S  +         +G  K+   L   PNHVLVMKERQ+LGSSATMARG F  +       L +  ++  G
Sbjct:   76 VSKAVDLTLEATSRRSALLPASILACCHR---DALGIMTTSS-------------VGNAAXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXRRQSSLLEATGRLEEAVSRMMKDYQRARKEVLYGLDDLGRPLEEVASLGREVDRGGRSPSIPREPVSLEDLQSLSKREKLPRTGSINISVLKNGLSTT--------AGGVPASSKEAQVSDEI---------AGRRKERDPLGGVPNHVLVMKERQKLGSSATMARGAFLFSLSGLCSALTKKRVSRAG 321

[Close]

BLAST of mRNA_P-lacustris_contig98.16124.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.040e-21
Identity = 72/182 (39.56%), Postives = 92/182 (50.55%), Query Frame = 0

Query:  178 SSFREVSATLEEAVSRLMKDFNRARKEVLYGLDEFGRPLE-----GSSRQDGSARPREPGSPECLETLDDCDMSPTSSTNVYRWRDDLAVNMGRSAASPAGGGPVRRQVVKASQPMESEGARWRRSGATKDGGSLASPPNHVLVMKERQRLGSSATMARGRFCSASLSFARPLPRSELTTRG 354
            SS  E +  LEEAVSR+MKD+ RARKEVLYGLD+ GRPLE     G     G   P  P  P  LE L     S +   N+ R        +    ++ AGG P R +  + S+ +          G  ++G  L   PNHVLVMKERQ+LGS+ATMARG F  +       L +  +   G
Sbjct:  458 SSLLETTGRLEEAVSRMMKDYQRARKEVLYGLDDLGRPLEEVASSGREVDSGGRSPSLPRDPVSLEDL----QSLSKRINLPRTGSINLSGLKNGLSTTAGGLPARSKEAEVSEGI---------GGRRREGDPLGGVPNHVLVMKERQKLGSAATMARGAFLFSLSGLCSALTKKRVNRTG 626

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig98.16124.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig98.16124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JZ72_9PHAE	8.050e-28	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LD61_ECTSI	1.040e-21	39.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 184..204

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig98	contig	P-lacustris_contig98:254194..258138 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig98.16124.1	mRNA_P-lacustris_contig98.16124.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig98 251191..260175 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig98.16124.1 ID=prot_P-lacustris_contig98.16124.1|Name=mRNA_P-lacustris_contig98.16124.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=358bp
MPPNSPKFGDITGGAGVVEAGAGPAVGWLRRGRHAVGGCSGGVVGADGSS
PSRGARHAAEHGRYAQHEGTGVLHINNWLVTAGVSRAVRDTLEVTSRRSA
MLPASILTCYHLPRSDGANVLGTASTKAKASATNSNSVIGKRKTDGAAST
NANTNTNSRTVDGDEENAIPSPGTRRQSSFREVSATLEEAVSRLMKDFNR
ARKEVLYGLDEFGRPLEGSSRQDGSARPREPGSPECLETLDDCDMSPTSS
TNVYRWRDDLAVNMGRSAASPAGGGPVRRQVVKASQPMESEGARWRRSGA
TKDGGSLASPPNHVLVMKERQRLGSSATMARGRFCSASLSFARPLPRSEL
TTRGAGV*