prot_P-lacustris_contig978.16095.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig978.16095.1
Unique Nameprot_P-lacustris_contig978.16095.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length351
Homology
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE)

HSP 1 Score: 521 bits (1341), Expect = 1.240e-180
Identity = 275/376 (73.14%), Postives = 306/376 (81.38%), Query Frame = 0
Query:    1 MNRGARISVDLG-------GLQRQQQQDANAVAPAPPSLVFPQRLPRLRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEG-EGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYRRSSGKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADMWETAQNILRASGTREQREAFGKLQELRQSKEDEAAPVGGREAPRMAV------------------KRKKLRNSKGARAAFDAVANARLFEQ 350
            + RGARISVDLG                         SLVFPQRLPRLRVVFED+HLFVVMKPAGMICQPC AAPRGTVLHGLMYHM+QSGQ++EG + M AAANTLSQGIVQRLDKQTSG+MVVAKTLAASSKLS+LF+KGKV KQYLA+CHGDPGFDSVV+APLYRRSSGK+GAV P EA +F+AKEAQTR+RNVATA G+SLCRADILTGRMHQVRVHLKWIGCPIVGD+EYGD +AN  V++RSA+R + +RPLLHSVSLEFIHPFTN+PMSFKAPMP DMWETAQNILR SGT EQ+EAFGKLQELRQS+ DEAAPVGGR APRMA                   K++    SKGARAAF+AVA + +FEQ
Sbjct:  184 VKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELRQSQADEAAPVGGRGAPRMAAGGRGGGXXXXXXXXXGGGKKRPGNRSKGARAAFEAVAKSEIFEQ 559          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.520e-55
Identity = 118/303 (38.94%), Postives = 168/303 (55.45%), Query Frame = 0
Query:   22 ANAVAPAPPSLVFPQRLPRLRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHG------------DPGFDSV----VEAPLYRRSSGKMGAVNPSE----------AADFKAKEAQTRIRNVATA-------------GGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADMWETAQNIL 285
            A A A APPS   P +  +L VV+EDEH+ VV KP G++ QP  + PRGT+L+G+++HM+  G+   G+ +  AA  L QG+V RLD+ TSG+++VAK L ASS LS++FK  KV K YLA+  G            D G D      ++APLY+R+SGKM    P +          A+    K A TR++ +  +             GG+   + +I TGR HQ+R HL   G P++GD  Y     +A  AR +A  +   RPLLH++SL   HP TN  +   AP+PADMW    +++
Sbjct:   68 AAADAVAPPSEQLPAQDLKLHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEV--AAQGLLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYC-AGGDAGAARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMWRVLSDVV 367          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK)

HSP 1 Score: 181 bits (458), Expect = 5.740e-50
Identity = 95/249 (38.15%), Postives = 152/249 (61.04%), Query Frame = 0
Query:   41 LRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYRRSSGKMGAVNPSE----AADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADMWETAQNIL 285
            L V+FED+ L  V+KPAG++C P ++   GTVL+GL++H L++ Q    +    +  TLS+GIV RLDK TSGVM+ AK   A+ KLS  F+  + +K+YL +C+G     +VVE P+YR  +GKM  ++  +     ++ + K++++ ++ +    G+SL   +++TGRMHQ R+HLK++G PI+GD  YG     A V + +   +   R LLH+  L   HP T   +   AP+P+DMW   ++ +
Sbjct:  134 LSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLETEQ----QVFANSIETLSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYG----LARVNKDAYQDLGVDRALLHASRLIVQHPRTGEKLDLSAPVPSDMWGVIEDCI 374          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 170 bits (431), Expect = 7.940e-46
Identity = 96/245 (39.18%), Postives = 139/245 (56.73%), Query Frame = 0
Query:   35 PQRLPRLRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYR--RSSGKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADM 277
            P+ +P L +++EDEHL  V KP GM+  P   +  GT  + L +HM   G+     G     + L  GIV RLDK TSGV++ +K     +KLS +F   K+ K YLA+C G+PG D  +E  + R  ++  KM  ++ ++    +A+ A T +  ++    +SL R  I TGR HQ+RVHL     P++GD+ YG+ D N    RR+  R   +RPLLH+  LE  HP T  P+S KAP+P DM
Sbjct:  138 PEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAG---GGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQN----RRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDM 374          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.900e-43
Identity = 98/246 (39.84%), Postives = 141/246 (57.32%), Query Frame = 0
Query:   35 PQRLPRLRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEE-GEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYRRSSG--KMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADM 277
            P+ +P L V+FED  L  + KP GM+  P      GT ++ L++H+ + G +   GE     +  L  G+V RLDK TSGV++ AKT     +LS LF   KV K YLA+C G+PG D  ++ P+ R ++   KM AV P      +A+ A + +R  A  G +S+    I TGR HQ+RVHL+    PIVGD+ YG++D N  + +R  +R     PLLH++ LEF HP T   +  +AP+P DM
Sbjct:  126 PEDIP-LDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVSLGE-----SGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAV-PDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGISR-----PLLHALRLEFTHPTTGAALRLEAPLPEDM 358          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A1F8JRD2_9BACT (Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=204428 RepID=A0A1F8JRD2_9BACT)

HSP 1 Score: 159 bits (402), Expect = 1.250e-42
Identity = 101/238 (42.44%), Postives = 132/238 (55.46%), Query Frame = 0
Query:   41 LRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYRRS-SGKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADM 277
            L ++FEDEHL  + KPAGM+  P    P  T ++ L++H  +          T  A  L  GIV RLDK+TSGV++ AK+ AA  ++ SLF + KV K Y+AIC G+P  D  + APL R     K  AV PS       KEA T IR +++ G  S      LTGR HQ+RVH++ IG PI+GD  YG    N         ++   R LLH+ SL FIHPF  RP+   AP+PA M
Sbjct:   81 LDILFEDEHLIAINKPAGMVVHPAPGHPSHTFVNALLHHCKELPD-------TLGA-PLRPGIVHRLDKETSGVLLAAKSQAAHREIVSLFSERKVKKTYVAICLGNPK-DQTIRAPLLRHPVRRKEIAVAPS------GKEAVTSIRVLSSQGNYSFVEIAPLTGRTHQIRVHMRHIGAPILGDPVYGPAFLN--------KKLQLSRQLLHARSLFFIHPFEKRPLEISAPLPAAM 295          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A7W1CHF3_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1CHF3_9BACT)

HSP 1 Score: 159 bits (402), Expect = 1.460e-42
Identity = 96/252 (38.10%), Postives = 147/252 (58.33%), Query Frame = 0
Query:   35 PQRLPRLRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYRRSS--GKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADMWETAQNI 284
            P+ +P L ++FEDE++ V+ KPAGM+  P      GT ++ L+YH  +   + +    T+    +  GIV RLDK T+G++V AKT  A  KL++LF   ++ K+YLAIC G+PG +  +EAP+ R  +   KM  V          K+A ++ + +   G +SL   +++TGR HQ+RVHL+ +  P++GD  YG      NV    AN+  A R +LH+  LEFIHPFT   + F+AP+P +M    +NI
Sbjct:   78 PENIP-LTIIFEDEYMIVIDKPAGMVVHPASGNWSGTFVNALLYHCQEVSALLDP---TSPDLNVRPGIVHRLDKNTTGLLVAAKTSKAHEKLAALFFNREIRKEYLAICVGNPG-NVDIEAPIGRNPACYQKMAVVKDG-------KKALSQCKTLGYNGKLSLVSVNLVTGRTHQIRVHLQSVNTPVLGDPIYG------NVKINLANK--AERQMLHAHRLEFIHPFTQELLKFEAPLPKEMNTIVKNI 309          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 8.230e-42
Identity = 94/256 (36.72%), Postives = 145/256 (56.64%), Query Frame = 0
Query:   41 LRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAA----------NTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYR--RSSGKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADMWETAQNI 284
            L +++ED+ +  V KPAGM+  P   +  GT ++ L++H+ +SG    G G+  AA           +L  GIV RLDK T+GV++ AK     +KL+ LF + ++ K YLA+C G+PG  + ++ P+ R  R   +M AV P+   + +++ A + +  VA  G +S+    I TGR HQ+RVHL+    P++GD+ YG+ D N    RR        RPLLH+ SLEF HP T   +S  AP+P+D+    + I
Sbjct:  180 LDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAV-PTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWN----RRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 430          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A2V8LI45_9BACT (Pseudouridine synthase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8LI45_9BACT)

HSP 1 Score: 156 bits (395), Expect = 1.150e-41
Identity = 101/275 (36.73%), Postives = 145/275 (52.73%), Query Frame = 0
Query:    4 GARISVDLGGLQRQQQQDANAVAPAPPSLVFPQRLPRLRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDS-VVEAPLYRRSSGKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADM 277
            G  I +DLG L+           PAP   + P++LP L++ FEDE L VV KPAG++  P      GT++HGL++H          + ++        GIV RLDK TSG+++VAK   A ++LS  F+  ++ K YLA+ HG P  DS  +E  + R  S +      +E    K + A T  R V    G SL    I TGR HQ+RVHL  IG P+VGD  YG++  N  V +      +  R  LH+ +L F HP T+ P+ F +P+P ++
Sbjct:   55 GETIEIDLGALE-----------PAP---LTPKQLP-LQIYFEDEDLAVVEKPAGVVVHPGSGTGGGTLVHGLLFHF---------QNLSDMGGKNRPGIVHRLDKWTSGLIIVAKNNVAHARLSQAFQDRQIQKSYLALVHGRPRLDSGTIELSIGRHPSIRTKMAAATE----KGRSAYTEYRVVEQFRGFSLVELKIKTGRTHQIRVHLSAIGHPVVGDDVYGERQYNQFVKKHG----ELNRYFLHAAALGFNHPSTHVPLKFHSPLPEEL 297          
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Match: A0A6M2A1C5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A1C5_9BACT)

HSP 1 Score: 156 bits (394), Expect = 1.790e-41
Identity = 95/246 (38.62%), Postives = 136/246 (55.28%), Query Frame = 0
Query:   33 VFPQRLPRLRVVFEDEHLFVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLSQGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGFDSVVEAPLYRRS-SGKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPLLHSVSLEFIHPFTNRPMSFKAPMPADM 277
            V P+ +P L +++EDE + VV KP+GM+  P   +  GT  + L++H  Q  + EE E        L  GIV RLDK TSG+++ AK LAA  KL   F    + KQYL IC G P  +    AP+ R   + K   +NP      + KEA+T    +    G+SL +A ++TGR HQ+RVHLK + CP++GD  YG    N         + +  R +LH+ SL+ IHP +  P+ F AP+P+DM
Sbjct:   72 VKPEAIP-LEILYEDESIIVVNKPSGMVVHPAPGSYSGTFANALLHHCKQLKK-EEFEN-------LRPGIVHRLDKDTSGILIAAKNLAAHQKLVEQFASRSIEKQYLVICLGVPK-EGECSAPIKRHPINRKQMTINP------EGKEARTHFTVLGRRKGLSLVQAKLITGRTHQIRVHLKSMNCPVLGDTTYGSPSLN--------QKYNTTRQMLHARSLKMIHPISEIPLEFIAPIPSDM 293          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig978.16095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K089_9PHAE1.240e-18073.14S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YI41_9STRA1.520e-5538.94Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XRN0_HETAK5.740e-5038.15Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S3XXK7_HETAK7.940e-4639.18Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A836CH15_9STRA4.900e-4339.84Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A1F8JRD2_9BACT1.250e-4242.44Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=20... [more]
A0A7W1CHF3_9BACT1.460e-4238.10Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
D8LFM8_ECTSI8.230e-4236.72Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A2V8LI45_9BACT1.150e-4136.73Pseudouridine synthase (Fragment) n=1 Tax=Acidobac... [more]
A0A6M2A1C5_9BACT1.790e-4138.62Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 42..287
e-value: 1.8E-59
score: 202.9
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 36..283
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 36..283
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 49..215
e-value: 2.9E-26
score: 92.5
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 35..282
e-value: 1.3E-58
score: 196.6
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 104..118
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 38..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig978contigP-lacustris_contig978:54690..57722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig978.16095.1mRNA_P-lacustris_contig978.16095.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig978 53767..59395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig978.16095.1 ID=prot_P-lacustris_contig978.16095.1|Name=mRNA_P-lacustris_contig978.16095.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=351bp
MNRGARISVDLGGLQRQQQQDANAVAPAPPSLVFPQRLPRLRVVFEDEHL
FVVMKPAGMICQPCEAAPRGTVLHGLMYHMLQSGQIEEGEGMTAAANTLS
QGIVQRLDKQTSGVMVVAKTLAASSKLSSLFKKGKVMKQYLAICHGDPGF
DSVVEAPLYRRSSGKMGAVNPSEAADFKAKEAQTRIRNVATAGGMSLCRA
DILTGRMHQVRVHLKWIGCPIVGDKEYGDQDANANVARRSANRVDARRPL
LHSVSLEFIHPFTNRPMSFKAPMPADMWETAQNILRASGTREQREAFGKL
QELRQSKEDEAAPVGGREAPRMAVKRKKLRNSKGARAAFDAVANARLFEQ
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR006225PsdUridine_synth_RluC/D
IPR006224PsdUridine_synth_RluC/D_CS
IPR020103PsdUridine_synth_cat_dom_sf