prot_P-lacustris_contig978.16090.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig978.16090.1
Unique Nameprot_P-lacustris_contig978.16090.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length806
Homology
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BLAST of mRNA_P-lacustris_contig978.16090.1 vs. uniprot
Match: D7FUY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY7_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.100e-14
Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 0 
Query:  706 CALARKRALLRVRLARQRKVLAAAVVDAIERGLRAERRRRREEKLGALLMKAQRNEDLCVGRGSGAGSDDKAAEGGRRNAMGW 788
            CALARKRALLRVRLARQR+ LA A VDA ERGLRAER           LMKA+R+ED C   GSGAGS+D +  GGRR+A G+
Sbjct:   47 CALARKRALLRVRLARQRQSLATAAVDANERGLRAERXXXXXXXXXXXLMKARRDEDFC---GSGAGSEDGSICGGRRSASGY 126
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig978.16090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUY7_ECTSI1.100e-1463.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 143..719

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig978contigP-lacustris_contig978:20905..23976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig978.16090.1mRNA_P-lacustris_contig978.16090.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig978 19810..24033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig978.16090.1 ID=prot_P-lacustris_contig978.16090.1|Name=mRNA_P-lacustris_contig978.16090.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=806bp
MDKFFDGLRGFLLRIRVAGQLRQDLVAERHFSELKTLCRGVCAELGTTAV
LQELWALVCSEPISSATGDRQASSLKRDAEIVSRAREILQKAADATCRSN
DIVSETRARGSDLLCARRRHLPRLGRSLVPTSSDGTQREERLSSQPSQRD
PSRGPNDAFQDPADVFPLRDLAEALGVSPAKDAYLGFVGTNEQALADTTK
MCFDHPTSTKTPPPMPAPVDWNLAVHRLLLRQKNTTTKVVVPIVEPLLPS
SPEKPATRESLPLSLPLSPSSTASSTSSSSLQATQRTKHFVWRGRVRGGR
PAAAMSAEQPARCSGDEIGGENASRKADCRQDCFSPRLERKQEARRTESC
ESRGVSVGKLGRIVGDDDVTTAPPGVTARTEVETDRRTKTLTRKRVPRRE
LSRALESSPPRLRRVSWHVPLATSPPPPPPSPPPPPPPWPREDWAEAKLR
DLDEETNNGRARGPSIVEGGVCKEARRRRETREGLVAPPSPRVWSVGRRR
GGEVRYSRRQEQVSGDDASDDGDVVCCTPKLSKHNSEEEQEFLQDVLENE
VDGWGGRGGGDIKGQRCSGCYFAESDDFEDFRDERNSLDTLRGPDAEART
IKHAQTTARGCHTAFQTRTGTHADMHRFYRPPWPLGVTFDGGTSRHRCNS
SNKSWDGGGCEGLGDAGDEGGGESPKSSNSTRPRGVSSPAGEEKKGDHDD
DDESSCALARKRALLRVRLARQRKVLAAAVVDAIERGLRAERRRRREEKL
GALLMKAQRNEDLCVGRGSGAGSDDKAAEGGRRNAMGWRLVPVRNKGAAN
VAILP*
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