prot_P-lacustris_contig977.16088.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig977.16088.1
Unique Name	prot_P-lacustris_contig977.16088.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	167

Homology

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: D7FNL5_ECTSI (Short-chain alcohol dehydrogenase-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL5_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 1.320e-96
Identity = 143/165 (86.67%), Postives = 156/165 (94.55%), Query Frame = 0

Query:    2 LLRALDAAGNPKVDVLINNAGVMMRDRNTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            L+ AL+ AG+PKVDVLINNAGVM RDRNTLDI VLR+SMEVNAYGALRIT+ LL +R+LA PGAK++LITSKMGSMADN+SGGAYGYRMSKAALNAAGVSLAHDLKG+G+AVAILHPGWVRTRMTGDSGLVD HESVAGMT RIEELDLSNSGTFWGFKGD+IPW
Sbjct:   74 LVSALEKAGSPKVDVLINNAGVMKRDRNTLDIGVLRESMEVNAYGALRITNTLLGKRMLAAPGAKIILITSKMGSMADNSSGGAYGYRMSKAALNAAGVSLAHDLKGDGMAVAILHPGWVRTRMTGDSGLVDTHESVAGMTDRIEELDLSNSGTFWGFKGDVIPW 238

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: A0A7Z9G4R6_9DELT (SDR family oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Z9G4R6_9DELT)

HSP 1 Score: 187 bits (474), Expect = 4.740e-57
Identity = 99/166 (59.64%), Postives = 128/166 (77.11%), Query Frame = 0

Query:    3 LRALDAA-GNPKVDVLINNAGVMMRDR-NTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            ++ LDA  G+ ++D+LINNAG++ R+    LD+D + +  +VN+ G LR+T+ L  R    + GAKV +I+S+MGS+ADN+SG  YGYRMSKAA+N AGVSLA DLK +GIAVAILHPGWVRT MTG++GLVDA ES AG+ ARIEEL L NSGTFW   G+I+PW
Sbjct:   58 VQMLDAELGDTQLDLLINNAGILRRESLEELDMDSMLEQFKVNSLGPLRVTATLRHRM---SAGAKVAIISSRMGSIADNSSGSRYGYRMSKAAVNIAGVSLARDLKPQGIAVAILHPGWVRTDMTGNTGLVDAKESAAGLIARIEELTLENSGTFWHMNGEILPW 220

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: A0A2E9QWS4_9DELT (Short-chain dehydrogenase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2E9QWS4_9DELT)

HSP 1 Score: 183 bits (465), Expect = 1.100e-55
Identity = 93/158 (58.86%), Postives = 118/158 (74.68%), Query Frame = 0

Query:   10 GNPKVDVLINNAGVMMRDR-NTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            G+ K+D+LINNAG++ R+    +D D + K  EVN+ G LR+T  LL      + GAKV L+TS+MGS+ADNTSG  YGYRMSKAALN AGVSLAHDLK   I+VAILHPG+VRT MTG  G++DA +S AG+  RI+EL+L NSGTFW   G+++PW
Sbjct:   66 GDEKIDILINNAGILKRETLEEMDYDTIFKQFEVNSVGPLRVTHTLLPH---LSEGAKVALVTSRMGSIADNTSGSRYGYRMSKAALNMAGVSLAHDLKDRSISVAILHPGFVRTDMTGRQGMIDADQSAAGLIQRIDELNLDNSGTFWHTNGEVLPW 220

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: UPI001688FB54 (SDR family oxidoreductase n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001688FB54)

HSP 1 Score: 181 bits (459), Expect = 9.160e-55
Identity = 98/162 (60.49%), Postives = 118/162 (72.84%), Query Frame = 0

Query:    7 DAAGNPKVDVLINNAGVMMR-DRNTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTG-DSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            D  GN  +DVLINNAG++ R     LD D +R+  EVNA GALR+T  LL R      G+KVVLITS+MGS+ADNTSGG+YGYRMSK AL+ AG SLAHDLK  GIAVA+LHPG V+TRMT   SG + A  SV G+ ARI++L L NSGTFW   G+++PW
Sbjct:   63 DRLGNQSIDVLINNAGILQRVTLEDLDFDSIRQQFEVNALGALRVTHTLLPR---LKAGSKVVLITSRMGSIADNTSGGSYGYRMSKVALSMAGKSLAHDLKSRGIAVAVLHPGLVQTRMTNFTSGGISAETSVKGLLARIDQLTLDNSGTFWHSNGEVLPW 221

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: A0A523MPW3_9GAMM (SDR family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MPW3_9GAMM)

HSP 1 Score: 181 bits (458), Expect = 1.260e-54
Identity = 94/154 (61.04%), Postives = 121/154 (78.57%), Query Frame = 0

Query:   14 VDVLINNAGVMM-RDRNTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            +D+LINNAG++     + LDI+ +R+  EVNA G LR+T +LL        GAK+VL+TS+MGS+ADN SGG+YGYRMSKAALNAAG+SLA DL+G GIAVAILHPG+VRT MTG SGL+D  ESVAG+  RI+ L+L+NSG+FW   G+++PW
Sbjct:   70 IDLLINNAGILHGMSLDDLDIESVRQQFEVNALGPLRVTRSLLHA---LKDGAKIVLLTSRMGSIADNDSGGSYGYRMSKAALNAAGMSLARDLRGRGIAVAILHPGYVRTDMTGQSGLLDVDESVAGLLERIDGLNLANSGSFWHSNGELLPW 220

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: UPI001CBCA980 (SDR family oxidoreductase n=1 Tax=Pseudomonas nanhaiensis TaxID=2830842 RepID=UPI001CBCA980)

HSP 1 Score: 178 bits (451), Expect = 1.450e-53
Identity = 94/164 (57.32%), Postives = 120/164 (73.17%), Query Frame = 0

Query:    4 RALDAAGNPKVDVLINNAGVMMRDR-NTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            + ++A     +D+LINNAG++  +R  T+D D +R+ MEVNAY  LR+T ALL    L   GAKV  ITS+MGSMADN SGG YGYR SKAALNA G SLA DLKG GIAVA+LHPG+V+TRMTG++G +   ES AG+ ARI+ L L N+G+FW   G+++PW
Sbjct:   60 KLVEALDGESIDLLINNAGLLRDERLGTIDFDSIRQQMEVNAYAPLRVTEALLP---LLGQGAKVANITSRMGSMADNDSGGRYGYRASKAALNAFGKSLAMDLKGRGIAVALLHPGYVQTRMTGNTGQMTPEESAAGIAARIDALTLDNTGSFWHSNGELLPW 220

[Close]

BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: A0A2D6IUG9_9GAMM (Short-chain dehydrogenase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2D6IUG9_9GAMM)

HSP 1 Score: 175 bits (444), Expect = 1.660e-52
Identity = 92/154 (59.74%), Postives = 115/154 (74.68%), Query Frame = 0

Query:   14 VDVLINNAGVMMRDR-NTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            VD+LINNAG++     + LD+   R+  E+NA G LR+T +LL        G K+ L+TS+MGS+ADN SGG+YGYRMSKAALNAAG+SLA DL   GIAVAILHPG+VRT MTG SGL+D  ESV GM  RI+EL+LSNSG+FW   G+++PW
Sbjct:   70 VDLLINNAGILRSTSLDNLDLASARQQFEINALGPLRVTQSLLPA---LKDGGKIALVTSRMGSIADNDSGGSYGYRMSKAALNAAGMSLARDLHERGIAVAILHPGYVRTDMTGQSGLIDTDESVDGMLERIDELNLSNSGSFWHTNGELLPW 220

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: A0A1H1PEU6_9GAMM (Short-chain dehydrogenase n=1 Tax=Halopseudomonas xinjiangensis TaxID=487184 RepID=A0A1H1PEU6_9GAMM)

HSP 1 Score: 175 bits (443), Expect = 2.350e-52
Identity = 92/164 (56.10%), Postives = 120/164 (73.17%), Query Frame = 0

Query:    4 RALDAAGNPKVDVLINNAGVMMRDR-NTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            + ++A G+ ++DVLINNAG++  +R  ++D D +R+ MEVNAY  LR+T ALL    L   GAK+  ITS+MGSMADN SGG YGYR SKAALNA G SLA DLK  GIAVA+LHPG+V+TRMTG++G +   ES  G+ ARI+ L L N+G+FW   G+ +PW
Sbjct:   60 KLVEALGSQQIDVLINNAGLLHDERLGSIDFDSIRQQMEVNAYAPLRVTEALLP---LLGQGAKIANITSRMGSMADNDSGGRYGYRASKAALNAFGKSLAMDLKPRGIAVALLHPGYVKTRMTGNTGQLTPEESARGLVARIDALSLENTGSFWHSNGESLPW 220

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BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: A0A2G6CLS8_9PROT (Short-chain dehydrogenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2G6CLS8_9PROT)

HSP 1 Score: 173 bits (439), Expect = 9.480e-52
Identity = 91/158 (57.59%), Postives = 115/158 (72.78%), Query Frame = 0

Query:   10 GNPKVDVLINNAGVMMRDR-NTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            G  ++D+LINNAG++ R+  + +  + + +  EVN+ G LR+T ALL+       G+KV L+TS+MGS+ADNTSG  YGYRMSKAALN AGVSLAHDL+  GIAVAILHPG+VRT MT   GL+DA ES  G+ AR+E L L  SGTFW   GDI+PW
Sbjct:   66 GATRIDLLINNAGILRRESLDEMSFESMVEQFEVNSLGPLRVTHALLTN---LGEGSKVGLVTSRMGSIADNTSGSRYGYRMSKAALNIAGVSLAHDLRHRGIAVAILHPGFVRTEMTNQQGLIDADESARGLLARLEALTLETSGTFWHQNGDILPW 220

[Close]

BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Match: A0A2S9YLA9_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9YLA9_9DELT)

HSP 1 Score: 172 bits (437), Expect = 1.900e-51
Identity = 87/158 (55.06%), Postives = 115/158 (72.78%), Query Frame = 0

Query:   10 GNPKVDVLINNAGVMMRDR-NTLDIDVLRKSMEVNAYGALRITSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGVSLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDLSNSGTFWGFKGDIIPW 166
            G+  +DVLINNAG++     + LD D +R+  EVNA G LR+ S+L +R      G+K+ ++TS+MGS+ADN+SGG+YGYRMSKAA+N AGVSLAHDL+ EG+AVA+LHPGWV+T MTG +G + A ES  G+ ARI+ L L  SG FW   G  +PW
Sbjct:   66 GDLSIDVLINNAGILQPSTLDALDFDAIRRQFEVNAMGPLRVVSSLRAR---LGSGSKIAIVTSRMGSLADNSSGGSYGYRMSKAAVNMAGVSLAHDLRPEGVAVALLHPGWVQTEMTGGTGHITAQESARGLIARIDALTLETSGGFWHQDGSRLPW 220

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig977.16088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNL5_ECTSI	1.320e-96	86.67	Short-chain alcohol dehydrogenase-like protein n=2...	[more]
A0A7Z9G4R6_9DELT	4.740e-57	59.64	SDR family oxidoreductase n=1 Tax=Myxococcales bac...	[more]
A0A2E9QWS4_9DELT	1.100e-55	58.86	Short-chain dehydrogenase n=2 Tax=Deltaproteobacte...	[more]
UPI001688FB54	9.160e-55	60.49	SDR family oxidoreductase n=1 Tax=Microcoleus sp. ...	[more]
A0A523MPW3_9GAMM	1.260e-54	61.04	SDR family oxidoreductase n=1 Tax=Gammaproteobacte...	[more]
UPI001CBCA980	1.450e-53	57.32	SDR family oxidoreductase n=1 Tax=Pseudomonas nanh...	[more]
A0A2D6IUG9_9GAMM	1.660e-52	59.74	Short-chain dehydrogenase n=1 Tax=Chromatiales bac...	[more]
A0A1H1PEU6_9GAMM	2.350e-52	56.10	Short-chain dehydrogenase n=1 Tax=Halopseudomonas ...	[more]
A0A2G6CLS8_9PROT	9.480e-52	57.59	Short-chain dehydrogenase n=1 Tax=Proteobacteria b...	[more]
A0A2S9YLA9_9DELT	1.900e-51	55.06	Uncharacterized protein n=1 Tax=Enhygromyxa salina...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 59..75 score: 21.05 coord: 12..23 score: 51.69 coord: 109..126 score: 33.25 coord: 88..107 score: 30.58
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 12..128 e-value: 1.1E-18 score: 67.4
None	No IPR available	GENE3D	3.40.50.720		coord: 2..166 e-value: 1.9E-38 score: 133.9
None	No IPR available	PANTHER	PTHR45458	FAMILY NOT NAMED	coord: 10..166
None	No IPR available	PANTHER	PTHR45458:SF1		coord: 10..166
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 10..166

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig977	contig	P-lacustris_contig977:70662..72095 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig977.16088.1	mRNA_P-lacustris_contig977.16088.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig977 69949..72212 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig977.16088.1 ID=prot_P-lacustris_contig977.16088.1|Name=mRNA_P-lacustris_contig977.16088.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=167bp
MLLRALDAAGNPKVDVLINNAGVMMRDRNTLDIDVLRKSMEVNAYGALRI
TSALLSRRLLATPGAKVVLITSKMGSMADNTSGGAYGYRMSKAALNAAGV
SLAHDLKGEGIAVAILHPGWVRTRMTGDSGLVDAHESVAGMTARIEELDL
SNSGTFWGFKGDIIPW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR036291	NAD(P)-bd_dom_sf