prot_P-lacustris_contig977.16085.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig977.16085.1
Unique Nameprot_P-lacustris_contig977.16085.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length321
Homology
BLAST of mRNA_P-lacustris_contig977.16085.1 vs. uniprot
Match: D7FNL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL7_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 2.680e-132
Identity = 227/344 (65.99%), Postives = 247/344 (71.80%), Query Frame = 0
Query:    1 MAGRRHQRHGQCTVLIFLFTMSWTRLSVSFTPPFAVRRSGAMPGSCSRGTSSLRH------TSSAQAPRAAA--AGDSTYGEGGGGDANDDIDQLVGIDEFRAATRERGRVEH----------EARAAAVAVAGGG--LGLDGAIFPSDVFPGSPVAEDITLQDVKLEKGQPEAMVGFWQLYGSTADGEDLSGRLVLRADGQVVGGPTVRKTPGVKWSDPEGLKPVGGRWGVYSDNRTGRARLRFTIVMSFQKKQELEMDGTVLMVGGIPEMGGQ----QDSEGWGTLEPGPGGGEPTPQVFGGVRKRNGEEMDAGEGDFSMMKVPAGEDKLVASVGSQQKRMW 320
            MA +RHQRH QC  L FL  MS T  S+SF PP A R SGA   S    TSS R        +S  APRAAA  AGD         D +D ID+LVGIDEFRA   ER R+E           EA AA VA  G G  LGL+GAIFP+D FPGSPV ++ITLQD KLE GQPEAMVGFW+LYGST DGEDLSGR++LRADGQVVGGPTVRKTPGV+WSDPEGL+PVGGRW VYSD RT RARLRFTIV+SF+KKQ+LEMDGTVLMV G+ EMGG      D EG G  E G   GEP PQVFGGV KRNGE MD GEGDF MMKVPAGEDKLVA+VGSQQKR W
Sbjct:    2 MANQRHQRHRQCPALAFLVAMSLTGSSMSFAPPLAARGSGAARPSLCGVTSSSRSPLRCVSNTSPTAPRAAAEAAGDQDDDRSSAND-DDGIDELVGIDEFRANKAERDRLEEQVEDGRRAVVEAAAAPVAGVGKGVGLGLEGAIFPNDAFPGSPVTKEITLQDTKLENGQPEAMVGFWKLYGSTGDGEDLSGRVILRADGQVVGGPTVRKTPGVEWSDPEGLQPVGGRWAVYSDKRTNRARLRFTIVLSFEKKQQLEMDGTVLMVDGMGEMGGLLSEGNDGEGAGEAELG---GEPKPQVFGGVFKRNGEVMDDGEGDFGMMKVPAGEDKLVATVGSQQKRFW 341          
BLAST of mRNA_P-lacustris_contig977.16085.1 vs. uniprot
Match: A0A835YWQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWQ6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.590e-28
Identity = 74/183 (40.44%), Postives = 98/183 (53.55%), Query Frame = 0
Query:  146 KLEKGQPEAMVGFWQLYGST-ADGEDLSGRLVLRADGQVVGGPTVRKTPGVKWSDPEGLKPVGGRWGVYSDNRTGRA---RLRFTIVMSFQKKQELEMDGTVLMVGGIPEMGGQQDSEGWGTLEPGPGGGEPTPQVFGGVRKR---NGEEMDAGEGDFSMMKVPAGEDKLVASVGSQ-QKRMW 320
            +L +G PE+MVGFWQLY    A   D + RLVLR DGQVVGGP V  T    WSDP G++  GGRW VY D   G+A   RLR T+  + Q+   L +DG +L          + D    G ++         P+V G V +R   +G +     G+FSM+KV     KL A VG+Q  +R+W
Sbjct:   65 QLHQGNPESMVGFWQLYADCDAARVDPADRLVLRPDGQVVGGPVVNPTAVTSWSDPAGVRACGGRWAVYEDTAEGKAGISRLRMTLFANPQRTAALVLDGIILCAS-------EYDRNKGGMVD--------VPRVLGDVSQRAIRDGRQQHRQSGEFSMLKVTTDHVKLKAEVGNQGPQRLW 232          
BLAST of mRNA_P-lacustris_contig977.16085.1 vs. uniprot
Match: A0A7S1DTS4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DTS4_HEMAN)

HSP 1 Score: 56.2 bits (134), Expect = 2.030e-5
Identity = 58/176 (32.95%), Postives = 80/176 (45.45%), Query Frame = 0
Query:  155 MVGFWQLYGSTADGEDL---SGRLVLRADGQVVGGPTVR---KTPGVKWSDPEGLKPVGGRWGVYSDNRTGRARLRFTIVMSFQKKQELEMDGT---VLMVGGIPEMGGQQDSEGWGTLEPGPGGGEPTP-QVFGGVRKR--NGEEMD------AGEGDFSMMKVPAGEDKLVASV 312
            +VGFWQL     DGE     +  LVLRA+GQV GGP VR    T  + W+  +  +P GG W     +  G+ R+   ++M   +  E    G     L+ G + E              P PGGG+ T  +VFG +     +GE M+         GDFSM+K+     KLV  V
Sbjct:   90 LVGFWQLMD---DGERTFTPADNLVLRANGQVSGGPPVRGYADTDDISWAAEQ--RPAGGVWRDEGPDEAGK-RMVSVLLMLPPRSAEQRASGVRFGSLLSGRVLEF-----------EAPSPGGGKETQMRVFGNITSGIVSGEGMERRIDDPVPAGDFSMVKISTKRQKLVQMV 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig977.16085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNL7_ECTSI2.680e-13265.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YWQ6_9STRA6.590e-2840.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1DTS4_HEMAN2.030e-532.95Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.682
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig977contigP-lacustris_contig977:54996..60054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig977.16085.1mRNA_P-lacustris_contig977.16085.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig977 54993..60765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig977.16085.1 ID=prot_P-lacustris_contig977.16085.1|Name=mRNA_P-lacustris_contig977.16085.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=321bp
MAGRRHQRHGQCTVLIFLFTMSWTRLSVSFTPPFAVRRSGAMPGSCSRGT
SSLRHTSSAQAPRAAAAGDSTYGEGGGGDANDDIDQLVGIDEFRAATRER
GRVEHEARAAAVAVAGGGLGLDGAIFPSDVFPGSPVAEDITLQDVKLEKG
QPEAMVGFWQLYGSTADGEDLSGRLVLRADGQVVGGPTVRKTPGVKWSDP
EGLKPVGGRWGVYSDNRTGRARLRFTIVMSFQKKQELEMDGTVLMVGGIP
EMGGQQDSEGWGTLEPGPGGGEPTPQVFGGVRKRNGEEMDAGEGDFSMMK
VPAGEDKLVASVGSQQKRMW*
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