prot_P-lacustris_contig977.16083.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig977.16083.1
Unique Nameprot_P-lacustris_contig977.16083.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length364
Homology
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A6H5L6B0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6B0_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 1.680e-121
Identity = 256/375 (68.27%), Postives = 282/375 (75.20%), Query Frame = 0
Query:    1 MRPEWMLCILPLASRG-VAFVAPTAGHLHLHVPKCNTL-----AACSRQSRELAAASAASRATARPSVAAEQQRSTLRMTGKNAP---RTNYRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGMTTSQIFSEALAGLAGVFLLAQALLDQQKDRALEMRREAIAAASVSAGGP--GATAGDAQEAFFDSAALGEDLEAKVMWAADIALQLTGACSFVLFSDGKLLARVGATGGESDATSDLAAAFKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DAVMQLLPSSCRQGVLCRISAPXXXXXXXXXXXGDLVVLLGSTLSGANVFSGTDGAWFERVCAYLALGSATAAVDARER 363
            MRP  +L +LPLASRG +AFV P AG LH  V   +TL     A CS +    A  + A+RA ARPS A  Q  +TLRM  KN P   +TNYRRPSAAIE+GGGFFVPGLEGFK R VL VVILGLL+L+GFARPGMT  Q+ S+ LAGLAGV L AQALLDQQK+RA EMRREAIAAA  SA GP  G  AG+ Q AFFDSAALG DLEAKVMWAADIALQLT ACSFV+FSDG++LARVGATGGESDA+  +AAAFKQA XXXXXXXXXXXXXXXXXXXXXXXXX         DA+MQLLPS+CRQGVLC +S P           GDLVVLLGSTL+GA V SG D AWFERVCA+LALG A  AV A ER
Sbjct:    1 MRPSSLLYLLPLASRGGLAFVLPAAGPLH--VAGSSTLFQKVNAPCSWRPPIPADPADATRAIARPSAAHRQHSNTLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLGVVILGLLSLEGFARPGMTIFQLISKLLAGLAGVLLFAQALLDQQKERAFEMRREAIAAAPASAQGPAMGTAAGEGQVAFFDSAALGSDLEAKVMWAADIALQLTAACSFVMFSDGEVLARVGATGGESDASDTVAAAFKQATXXXXXXXXXXXXXXXXXXXXXXXXXKRSANGGDNDALMQLLPSACRQGVLCTVSFPSSRHGEGG---GDLVVLLGSTLAGATVLSGMDAAWFERVCAFLALGPA--AVGAGER 368          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: W7TJU1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJU1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 9.810e-13
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0
Query:   75 GKNAPRTNYRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGMT--TSQIFSEALAGLAGVFLLAQALLDQ 154
            GK    + Y+RPS AIE GGGFF+PGLEG+KLRL  A+++L LL L+ +  PG T   SQ+ SEA+   A V LLAQAL+++
Sbjct:   70 GKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEK 149          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: L1JN20_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JN20_GUITC)

HSP 1 Score: 70.9 bits (172), Expect = 6.230e-11
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 0
Query:   83 YRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGM--TTSQIFSEALAGLAGVFLLAQALLDQQKD 157
            Y RPS A+E+GGGF+VPGLEG+KL+L ++V+   LL ++    PG   T +Q  SEA+     +F+L Q+LLD+  D
Sbjct:   54 YVRPSKALEKGGGFYVPGLEGYKLKLAVSVLAFSLLAINRVLLPGYQPTINQQTSEAVVVFTALFILIQSLLDKLSD 130          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A7S0NDC4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NDC4_9CRYP)

HSP 1 Score: 72.0 bits (175), Expect = 1.120e-10
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 0
Query:   83 YRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGM--TTSQIFSEALAGLAGVFLLAQALLDQQKDRALEMRREA 166
            Y RPS A+E+GGGF+VPGLEG+KL+L ++V+   LLT++    PG   T +Q  SEA+     +F+L Q+LLD+      E   EA
Sbjct:   58 YVRPSKALEKGGGFYVPGLEGYKLKLAVSVLAFFLLTMNRVLLPGYQPTINQQTSEAVVVFTALFILVQSLLDKTMQEGGEEENEA 143          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A7S0LMB5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LMB5_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 1.100e-9
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   83 YRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGMTTSQIFSEALAGLAGVFLLAQALLDQ-QKDRALEMRREAIAAASV 172
            Y+RP+AA+E+GGGF+VPGLEG +LRL  A V+   L L+  A  G+T+SQ+ SE L   A   L  Q   D+  + R ++    A A A +
Sbjct:   89 YKRPAAALERGGGFYVPGLEGNRLRLAAACVLSLALLLNRIASQGVTSSQLVSEVLGAAACALLFIQVFSDRLAESREIDQAGRAAATARL 179          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A7S2KLI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLI9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.440e-9
Identity = 58/162 (35.80%), Postives = 82/162 (50.62%), Query Frame = 0
Query:   83 YRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGL-----LTLDGFARPGMTTSQIFSEALAGLAGVFLLAQALLDQQKDRALEMRREAIAAASVSAGGPGATA------GDAQEAFFDSAALGEDLEAK-VMWAADIALQLTGACSFVLFSDG-KLLARVG 231
            Y RPSAAIE+G GF++PGLEG+++R++  V IL L     L LD       ++ Q+ S  +A L G+ LL QAL+D  K+        A      SA G  A A      G+ Q+   +     E    K + WAA   + LT A SF++   G K+L  +G
Sbjct:   68 YSRPSAAIERGSGFYIPGLEGYRVRILSGVSILALSFINTLFLDTPVSETASSLQV-SVNVANLFGLLLLLQALVDFGKETIFSTDYAAAQTTVKSAAGSNAVAKSNKIIGELQQVVSEDLTSAEKTYVKSIQWAAATFISLTPATSFLVVKRGNKILYSLG 228          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A7S4RMV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RMV8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.240e-9
Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   83 YRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGM---TTSQIFSEALAGLAGVFLLAQALLDQQKDR 158
            Y RPSAAIE+G GFFVPGLEG ++R++  +++L L  ++    P     T+ Q  SEA+A   GV LL QA  +  K+R
Sbjct:   38 YSRPSAAIERGSGFFVPGLEGSRVRILFGILVLILAFVNHVTAPLTELNTSGQSVSEAVAAFYGVLLLVQAFSEVGKER 116          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A0G4FI24_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FI24_9ALVE)

HSP 1 Score: 68.9 bits (167), Expect = 2.880e-9
Identity = 57/170 (33.53%), Postives = 84/170 (49.41%), Query Frame = 0
Query:   75 GKNAPRTNYR----RPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGMTTSQIFSEALAGLAGVFLLAQALLDQQKDRALEMRREAIAAASVSAGGPGATAGDAQEAFF------DSAALGEDLEA--KVMWAADIALQL-TGACSFVLFSDGKLLARVG 231
            GK A   N R    RP+AA+EQGGGFF+PGLEG++L +   + I  L T++          Q+ SEA+  LAG+ L+ Q L  ++++   E  R+ +   SV+           Q   F      DS +L + ++   K+ WAAD    +  G     L  DG+LL  VG
Sbjct:   76 GKRARTRNMRGFLVRPAAAVEQGGGFFIPGLEGWRLNVAFPLGIFLLATVNHVTSLDYPDGQLISEAVVSLAGLALILQGLAVREEE---ERERQRLDDMSVT-----------QRVLFSPMEEGDSPSLSDSVKDRDKLEWAADALTSIYPGVAVTFLEGDGRLLFHVG 231          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A7S4B697_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B697_CHRCT)

HSP 1 Score: 68.6 bits (166), Expect = 3.300e-9
Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 0
Query:   83 YRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGMTTSQIFSEALAGLAGVFLLAQALLDQQKDRALEMRREAIAAASVSAGGPGATAGDAQEAFFDSAALGEDLEAKVM----WAADIALQLTGACSFVLFSDGKLLARVG 231
            Y+RP+AA+E+GGGF++PGLEG++LRL++  V+   L  +    P  + SQ  SE L G + + L  Q   D+  +   + RRE   A + S                D   L   L+A+V     W A   L+L  A   V+  DG+ L   G
Sbjct:  105 YKRPAAALERGGGFYIPGLEGYRLRLLVGSVLSAALVANRITSPEPSVSQFVSEGLGGFSCLLLFIQVAADRAAEE--DDRRELARAIATSR-------------MEDRQQLAAQLDARVAEHAEWLARALLRLLPA-DVVMLLDGEALQTAG 241          
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Match: A0A7S0NXR1_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXR1_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 3.330e-9
Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 0
Query:   83 YRRPSAAIEQGGGFFVPGLEGFKLRLVLAVVILGLLTLDGFARPGMTTSQIFSEALAGLAGVFLLAQALLDQQKDR 158
            Y+RP+AA+E+GGGF+VPGLEG +LRL +A V+   L ++     G+  SQ+ SEAL   A + +  Q  LD  ++R
Sbjct:   71 YKRPAAAVERGGGFYVPGLEGSRLRLFVASVLSIALVVNHVFSAGVAPSQLGSEALGSCACLLIFVQVALDNFEER 146          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig977.16083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6B0_9PHAE1.680e-12168.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TJU1_9STRA9.810e-1353.66Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
L1JN20_GUITC6.230e-1146.75Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0NDC4_9CRYP1.120e-1045.35Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S0LMB5_9EUKA1.100e-942.86Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2KLI9_9STRA1.440e-935.80Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S4RMV8_9STRA2.240e-945.57Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A0G4FI24_9ALVE2.880e-933.53Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S4B697_CHRCT3.300e-932.68Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0NXR1_9EUKA3.330e-944.74Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021325Cofactor assembly of complex C subunit B, CCB2/CCB4PFAMPF11152CCB2_CCB4coord: 108..347
e-value: 1.9E-8
score: 33.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..363
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig977contigP-lacustris_contig977:28279..36951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig977.16083.1mRNA_P-lacustris_contig977.16083.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig977 28237..37555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig977.16083.1 ID=prot_P-lacustris_contig977.16083.1|Name=mRNA_P-lacustris_contig977.16083.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=364bp
MRPEWMLCILPLASRGVAFVAPTAGHLHLHVPKCNTLAACSRQSRELAAA
SAASRATARPSVAAEQQRSTLRMTGKNAPRTNYRRPSAAIEQGGGFFVPG
LEGFKLRLVLAVVILGLLTLDGFARPGMTTSQIFSEALAGLAGVFLLAQA
LLDQQKDRALEMRREAIAAASVSAGGPGATAGDAQEAFFDSAALGEDLEA
KVMWAADIALQLTGACSFVLFSDGKLLARVGATGGESDATSDLAAAFKQA
ATAAAAAAAAKAGEQNRGSSPTAAIVKRKDGDDNDAVMQLLPSSCRQGVL
CRISAPPDGGGGGGGDDGDLVVLLGSTLSGANVFSGTDGAWFERVCAYLA
LGSATAAVDARER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021325CCB2/CCB4