prot_P-lacustris_contig977.16079.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig977.16079.1
Unique Name	prot_P-lacustris_contig977.16079.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	662

Homology

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BLAST of mRNA_P-lacustris_contig977.16079.1 vs. uniprot
Match: D7FNM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM3_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.570e-55
Identity = 143/281 (50.89%), Postives = 172/281 (61.21%), Query Frame = 0

Query:   10 QTGARNGAN-ENRSETIDYVALHAKRKPRRRGSKHDVGNNRRC-DNRRSVAGEGENTTRRKVCASDRSQCRRRK--QGDVVFDPSGQHSTPRPNHENSGEHEEVSSFLDSFSAFGMTTD-PASIVNTTTTTATQSLPTSRCQHGVILEGQERVAEAVV-DNTQATLEMSKPLAKIDVYSILARAPLAEPGNAASHHLVSGVGDRGGPTFINKAGKKRHKRQKRVLQIVRC--LVGGRERKMFKTR-GSTPREEAGGYLIRDPLGDEVAELKAKVHKSLQRV 281
            QT ARN  N   R + ID+VALHA R+PRR+GSK+ V NN+R  +N  S  G         V   DR   RR +  + D    P    + P P H +SGE E+VS FLDSFSA  M    PA+ V T  T   QS PTS C    +LEGQ R AEAVV D TQ T+EMSKPLAKID+YSILA+AP   P + ASH  V G+G    PT  NKAG KRHKR++  L+ +    +VGG ER  F+T     PREE GGYL RDPLGDEVAEL AK+ +SL+ +
Sbjct:   54 QTDARNRGNGHRRRDNIDFVALHANRRPRRKGSKNGVENNQRTYENSNSPVG---------VNGEDRPHIRRERGIKSDRCLRPKA--NRPSPKHHDSGEEEDVSLFLDSFSASEMPGQHPAAAVQTAVTL--QSPPTSLCLDDGVLEGQARKAEAVVADTTQTTMEMSKPLAKIDLYSILAKAPPVAPRSTASHRPVDGIGCSVDPTMSNKAGMKRHKREQGSLRRLASSVVVGGDERPAFETALRLNPREEVGGYLKRDPLGDEVAELTAKLQESLRSI 321

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig977.16079.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig977.16079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FNM3_ECTSI	1.570e-55	50.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 557..581 score: 7.016

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig977	contig	P-lacustris_contig977:1690..5340 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig977.16079.1	mRNA_P-lacustris_contig977.16079.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig977 1690..5340 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig977.16079.1 ID=prot_P-lacustris_contig977.16079.1|Name=mRNA_P-lacustris_contig977.16079.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=662bp
MSSRFPCARQTGARNGANENRSETIDYVALHAKRKPRRRGSKHDVGNNRR
CDNRRSVAGEGENTTRRKVCASDRSQCRRRKQGDVVFDPSGQHSTPRPNH
ENSGEHEEVSSFLDSFSAFGMTTDPASIVNTTTTTATQSLPTSRCQHGVI
LEGQERVAEAVVDNTQATLEMSKPLAKIDVYSILARAPLAEPGNAASHHL
VSGVGDRGGPTFINKAGKKRHKRQKRVLQIVRCLVGGRERKMFKTRGSTP
REEAGGYLIRDPLGDEVAELKAKVHKSLQRVKHDAEREKHTSTIDIVGQH
MSFLDEEAGSLNLPKTLAKHYDDEDNTDGKEGTTNAGATSSSANFAPPAT
FYDASGDGTACVVQDSRRRGCRGRGSTDSYRANKKTRAPRNNNQSRRKTC
SETSAKRGGSGDSASGVLGVCWDNVGCSPANGGNQLSAGASPTDDGLCFA
GANHRLQAPQQGQQPRHDNDNNDRGQELSEFTDEKPESNTGSLVAVARSA
AESLARTTLGVAMDNNQVVNRIGDDAISRREGYSCSGGATGEEGILKHTA
SGAADVAAALKIEACWRGFRGRCAAKQLLRFALLDALRSIGGGKVVSLAD
VEREDQRGLSRALRVATQSRHQLPPQVKILECIRFVKSLQRRRARIVEAR
KRRWVAERRQRK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS