prot_P-lacustris_contig972.16050.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig972.16050.1
Unique Nameprot_P-lacustris_contig972.16050.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length237
Homology
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BLAST of mRNA_P-lacustris_contig972.16050.1 vs. uniprot
Match: D7G8U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U5_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.070e-52
Identity = 126/188 (67.02%), Postives = 138/188 (73.40%), Query Frame = 0 
Query:    1 MKRNHAFMATLGLATAKPPAAAVAATSSEGGKDRSKNKKRSRPVSRAREQAA-VVSVRRSARARGAEAVDYSEDKQAINAIATPARAAVAAPLEPEPILEEIDFDDSTVLKYLCGTEAKNIDNNGSGSSSANASKAA--------AASSLGAAEAVPEGARVVGLRVLDSARPLAASGLSTIYTMHFC 179
            +KRN AFMATLGLATAKP  AA AATSSEG K R+KNKKRSRPVSR+RE+AA VV VRRSAR RGAEAVDY+EDKQAINA+A           EPEPILEEIDFDDSTVLKYLCGTEA N+ + G   SSA A   A         A++L    A   GA VVGLRV+D   PL+ASGLSTIYTMHFC
Sbjct:  330 IKRNQAFMATLGLATAKP-LAAPAATSSEGTKGRNKNKKRSRPVSRSREKAATVVPVRRSARGRGAEAVDYNEDKQAINAVARAXXXXXXXXXEPEPILEEIDFDDSTVLKYLCGTEA-NVKDGGGNDSSAEAPNTAXXXXXXXQTAATLTGTGAASAGATVVGLRVIDPDDPLSASGLSTIYTMHFC 515
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BLAST of mRNA_P-lacustris_contig972.16050.1 vs. uniprot
Match: A0A6H5KMN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN1_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 7.250e-50
Identity = 124/189 (65.61%), Postives = 137/189 (72.49%), Query Frame = 0 
Query:    1 MKRNHAFMATLGLATAKPPAAAVAATSSEGGKDRSKNKKRSRPVSRAREQAA-VVSVRRSARARGAEAVDYSEDKQAINAIATPARAAVAAPLEPEPILEEIDFDDSTVLKYLCGTEAKNIDNNGSGSSSANASKAAAASSL---------GAAEAVPEGARVVGLRVLDSARPLAASGLSTIYTMHFC 179
            +KRN AFMATLGLATAKP AA+ AAT SEG K RS+NK RSRPVSR+RE+A+ VV VRRSARARGAEAVDY+EDKQAINAIAT A        EPEPILEEIDFDDSTV KYLCGTEA + D  G+ SS+   +                 GAA A   GA VVGLRV+D   PL+ASGLSTIYTMHFC
Sbjct:  208 IKRNQAFMATLGLATAKPLAAS-AATWSEGTKGRSQNKNRSRPVSRSREKASTVVPVRRSARARGAEAVDYNEDKQAINAIATAAXXXXXXXXEPEPILEEIDFDDSTVFKYLCGTEANDKDGGGNDSSAEAPNXXXXXXXXXXXXXXXXTGAASA---GATVVGLRVIDPDYPLSASGLSTIYTMHFC 392
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig972.16050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8U5_ECTSI1.070e-5267.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMN1_9PHAE7.250e-5065.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig972contigP-lacustris_contig972:55481..57508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig972.16050.1mRNA_P-lacustris_contig972.16050.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig972 49880..59111 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig972.16050.1 ID=prot_P-lacustris_contig972.16050.1|Name=mRNA_P-lacustris_contig972.16050.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=237bp
MKRNHAFMATLGLATAKPPAAAVAATSSEGGKDRSKNKKRSRPVSRAREQ
AAVVSVRRSARARGAEAVDYSEDKQAINAIATPARAAVAAPLEPEPILEE
IDFDDSTVLKYLCGTEAKNIDNNGSGSSSANASKAAAASSLGAAEAVPEG
ARVVGLRVLDSARPLAASGLSTIYTMHFCVAGTASGGRTATAPPLLAAGG
KGGSLRYFPHGDNDRCVRSQRQTATRTTRRKTSEPS*
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