prot_P-lacustris_contig971.16042.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig971.16042.1
Unique Nameprot_P-lacustris_contig971.16042.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length243
Homology
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BLAST of mRNA_P-lacustris_contig971.16042.1 vs. uniprot
Match: D7FWY6_ECTSI (MORN repeat variant family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY6_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.770e-56
Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 0 
Query:  118 GGWVEYFDPDTSAFWYLEKSTKRSTWNAPEAFADSMTCVWDPWPVPYSSPLDKPCRRVFTNMAEFQSHRLNAHPWQCASCGQRNSGMAFPRCELCDAK 215
            GGWVEYFDPDTSAFWYLE STK STWNAP+ F+DSMTCVWDPWPVPYSSPLDKPCR+VFTNMAEFQ+HRLNAHPWQCAS GQRNSGM FPRCEL D+K
Sbjct:  124 GGWVEYFDPDTSAFWYLENSTKHSTWNAPKDFSDSMTCVWDPWPVPYSSPLDKPCRKVFTNMAEFQAHRLNAHPWQCASWGQRNSGMTFPRCELWDSK 221
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BLAST of mRNA_P-lacustris_contig971.16042.1 vs. uniprot
Match: A0A835ZHY7_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY7_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.070e-35
Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 0 
Query:  119 GWVEYFDPDTSAFWYLEKSTKRSTWNAPEAFADSMTCVWDPWPVPYSSPLDKPCRRVFTNMAEFQSHRLNAHPWQCASCGQRNSGMAFPRCELC 212
            GW EYFD D + FWY++ +T+RSTW+APEAF +++TC WDPWP PY    ++PCR+ F    EFQ+HR  AH WQC +C   N+ ++FPRC LC
Sbjct:  125 GWTEYFDTDVNCFWYMDNATRRSTWDAPEAFREALTCNWDPWPHPYRGAGEEPCRQAFKTHEEFQTHRATAHRWQCLACEAINAALSFPRCALC 218
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig971.16042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWY6_ECTSI2.770e-5688.78MORN repeat variant family protein n=1 Tax=Ectocar... [more]
A0A835ZHY7_9STRA2.070e-3554.26WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 116..156
e-value: 9.7E-6
score: 26.7
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 114..148
score: 10.443
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 112..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig971contigP-lacustris_contig971:66870..74882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig971.16042.1mRNA_P-lacustris_contig971.16042.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig971 46411..74882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig971.16042.1 ID=prot_P-lacustris_contig971.16042.1|Name=mRNA_P-lacustris_contig971.16042.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=243bp
MGRRVQLHQDGSLGGEAVQYCGRSGSEGAGGDGLAGCLPRLGRSPDRSRQ
ASSRGGRDLHPEKAERRAGATDPKVLFSGKTTTTTTTTTTTTTTTTGGAD
VVLPQAVDQTQSRGPGSGGWVEYFDPDTSAFWYLEKSTKRSTWNAPEAFA
DSMTCVWDPWPVPYSSPLDKPCRRVFTNMAEFQSHRLNAHPWQCASCGQR
NSGMAFPRCELCDAKVSFGLKISSPSPPPFSWKIKGTRTWTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf