prot_P-lacustris_contig97.16029.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig97.16029.1
Unique Nameprot_P-lacustris_contig97.16029.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length218
Homology
BLAST of mRNA_P-lacustris_contig97.16029.1 vs. uniprot
Match: D7FYY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY7_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 5.720e-81
Identity = 153/216 (70.83%), Postives = 171/216 (79.17%), Query Frame = 0
Query:    2 IYSLCLGVFLLAGQASAFVLSPSGKGIVCLGLDGVARRASRGGVVMQATP-LELSVSLYKKCVGNKRWETDDGIEQRAKGTFGEMCKVYGEENAVQMVKNSPSCLGYDGSVFQATFEXXXXXXXXXXXXXXXXXXXXLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVVVVRCRRAMPLGPVLLWGLAFLLAIPLVEIATGIPREQMLASVVSIG 216
            IY+L LGV LLAGQA AFV SPSG+ I  +G  G +R  +  G+VMQAT  +E SVS YKK VG KRWETD+GIE+RA GTF +MCKVYGE+NAVQMVKNSPSCLGYDGSVFQATFE    XXXXXXXXXXXX    LLAVRPTGFGGAANAKSDTMQMSYVIAATR           PLGPVLL+GLAF LAIPLVE+ TGI REQ+L++++S G
Sbjct:    5 IYALHLGVCLLAGQACAFVCSPSGRAIASVGPKGASRAPA--GIVMQATSNVESSVSRYKKLVGAKRWETDEGIEKRAAGTFADMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATFEAFTEXXXXXXXXXXXXRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATR-----------PLGPVLLFGLAFCLAIPLVEMGTGISREQILSAIISGG 207          
BLAST of mRNA_P-lacustris_contig97.16029.1 vs. uniprot
Match: A0A6H5KAE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAE4_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.160e-44
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    2 IYSLCLGVFLLAGQASAFVLSPSGKGIVCLGLDGVARRASRGGVVMQATP-LELSVSLYKKCVGNKRWETDDGIEQRAKGTFGEMCKVYGEENAVQMVKNSPSCLGYDGSVFQATFE 117
            IY+L LGV LLAGQ  AFV  PSG+ I  +G  G +R  +  GVVMQAT  +E SV+ YKK VG KRWETD+GIE+RA GTF EMCKVYGE+NAVQMVKNSPSCLGYDGSVF+ATFE
Sbjct:    5 IYALHLGVCLLAGQTCAFVCPPSGRAIASVGPKGASRAPA--GVVMQATSNVESSVARYKKLVGAKRWETDEGIEKRAAGTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFRATFE 119          
BLAST of mRNA_P-lacustris_contig97.16029.1 vs. uniprot
Match: A0A7R9UE42_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE42_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.420e-19
Identity = 84/175 (48.00%), Postives = 102/175 (58.29%), Query Frame = 0
Query:   36 VARRASRGGVVMQATPLELSVSLYKKCVGNKRWETDDGIEQ-RAKGTFGEMCKVYGEENAVQMVKNSPSCLGYDGSVFQATFEXXXXXXXXXXXXXXXXXXXXLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVVVVRCRRAMPLGPVLLWGLAFLLAIPLVEIATGIPREQML 209
            VA   S GGV         +V ++KK     +  T   +E+ + K T+  + KVYG++NA++MVK  P CL +D S FQ    XXXXXXXXXXXXXXXXXXXX         GGA  AK DT  MSYVIA TR           PLGPVLL GL   L++PLVE  TGIPR ++L
Sbjct:   13 VAPALSFGGVKKGPDSSSAAVEVFKKRYAAPKPGTRYDVEEAKLKSTYKSIAKVYGDDNALEMVKAVPGCLAFDPSNFQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGATGAKDDTFYMSYVIAFTR-----------PLGPVLLAGLIAALSVPLVEGLTGIPRAELL 176          
BLAST of mRNA_P-lacustris_contig97.16029.1 vs. uniprot
Match: B7FNV7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNV7_PHATC)

HSP 1 Score: 80.9 bits (198), Expect = 2.240e-15
Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 0
Query:   64 GNKRWET-DDGIEQRAKGTFGEMCKVYGEENAVQMVKNSPSCLGYDGSVFQATFEXXXXXXXXXXXXXXXXXXXXLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVVVVRCRRAMPLGPVLLWGLAFLLAIPLVEIATGIPREQMLASVVSI 215
            G K+ ++  D  E+  + TF E+ ++YGE+NA+QMVK+    L +  + F  + E                    LLA+ P+G GGA +    TMQ SY++  TR           P GP LL+GL FLL  P +E  TGIP +  + S + +
Sbjct:   47 GRKKGKSFSDREEKDLRSTFKELARLYGEDNALQMVKDLTIVLAFKRNYFAPSLEAFSEVFGEEESKAMVQQNPGLLALPPSGAGGADSVTDQTMQFSYLVGYTR-----------PFGPFLLYGLLFLLFDPFLEYLTGIPIKTTITSALGL 188          
BLAST of mRNA_P-lacustris_contig97.16029.1 vs. uniprot
Match: A0A7S2MUE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUE2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 8.870e-14
Identity = 54/152 (35.53%), Postives = 73/152 (48.03%), Query Frame = 0
Query:   53 ELSVSLYKKCVGNKRWETDDGIEQRAKGTFGEMCKVYGEENAVQMVKNSPSCLGYDGSVFQATFEXXXXXXXXXXXXXXXXXXXXLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVVVVRCRRAMPLGPVLLWGLAFLLAIPLVEIATGIP 204
            E+SV       G   ++ D+  +QRA  TF EM ++YGE  A++M KN P+ L ++ S F  +                      LLA+ P     AA A   TMQ SY++AATR           P GPVLL G+  LL +P +E  TGIP
Sbjct:   83 EISVGKGGSASGRTLYDIDEA-QQRA--TFNEMARLYGEMEALEMTKNLPAVLAFNKSYFAESLANFSETFGEDDAKAMVQRNPGLLAIPPAN---AAKADGQTMQFSYIVAATR-----------PAGPVLLPGVLTLLCVPAIEAVTGIP 217          
BLAST of mRNA_P-lacustris_contig97.16029.1 vs. uniprot
Match: B5YMT8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMT8_THAPS)

HSP 1 Score: 59.7 bits (143), Expect = 2.510e-7
Identity = 44/140 (31.43%), Postives = 68/140 (48.57%), Query Frame = 0
Query:   72 DGIEQRAKGTFGEMCKVYGEENAVQMVKNSPSCLGYDGSVFQATFEXXXXXXXXXXXXXXXXXXXXLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVVVVRCRRAMPLGPVLLWGLAFLLAIPLVEIATGIPREQMLAS 211
            D  + + +  F  +  +YGEENA++MVK  P  L ++   F  + +                    LL+V+P     AA+A   TMQMSYV+  TR +           GPVL+ GL   LA+P +E A G+ + ++L+S
Sbjct:   94 DVNDDKLRIAFNTIVTLYGEENALKMVKIQPGVLAFNKDNFAPSLDAFGETFGLEEAKDMVIRNPGLLSVKPVI---AASADDLTMQMSYVVDFTRPIGAA--------GPVLILGL---LAVPALESALGVGKGELLSS 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig97.16029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FYY7_ECTSI5.720e-8170.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAE4_9PHAE3.160e-4470.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UE42_9STRA1.420e-1948.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
B7FNV7_PHATC2.240e-1533.33Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2MUE2_9STRA8.870e-1435.53Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
B5YMT8_THAPS2.510e-731.43Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..217
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.848

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig97contigP-lacustris_contig97:208274..216703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig97.16029.1mRNA_P-lacustris_contig97.16029.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig97 207629..216734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig97.16029.1 ID=prot_P-lacustris_contig97.16029.1|Name=mRNA_P-lacustris_contig97.16029.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=218bp
MIYSLCLGVFLLAGQASAFVLSPSGKGIVCLGLDGVARRASRGGVVMQAT
PLELSVSLYKKCVGNKRWETDDGIEQRAKGTFGEMCKVYGEENAVQMVKN
SPSCLGYDGSVFQATFEAFAEVFGEEETKGMVTRNPNLLAVRPTGFGGAA
NAKSDTMQMSYVIAATRQVVVVRCRRAMPLGPVLLWGLAFLLAIPLVEIA
TGIPREQMLASVVSIGK*
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