prot_P-lacustris_contig968.16003.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig968.16003.1
Unique Nameprot_P-lacustris_contig968.16003.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length242
Homology
BLAST of mRNA_P-lacustris_contig968.16003.1 vs. uniprot
Match: A0A6H5K756_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K756_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.970e-43
Identity = 107/220 (48.64%), Postives = 133/220 (60.45%), Query Frame = 0
Query:   37 NSHNAGHNTRGASRH----QRAGAQPTIAQXXXXXXXXXXXXPPQAPAGVNPSRCTAVISRGKKKGSVCGNMAGGRVAGLCQHHDGRQKXXXXXXXXXXXXXD--EAANYDSDNDVGGGVDELQTPGAEGAFARSKDTHYKRAANMTDTGFKEAQQSVWHLKK---------KPDPPXXXXXXXXXXPVPEDLLGWVTGGLPKDEESDAYKRRHKHVGGD 241
            NSH+AGHNTRG +       R  A    AQ XXXXXXXXXX P  +PA  NP+   A IS G+++G  CGN  G R AG C+HHDG QK                EA NYDS++++GGG+DELQTPGA    A+SK+ HY +A+ + D GF+ AQ+SVWHLK+         +P PP          P+P+D  GWV  GLP+DE S+ YKRRHKH GGD
Sbjct:  226 NSHDAGHNTRGGTPELPVTDRLPATSREAQQXXXXXXXXXX-PDSSPA--NPAVRVAFISPGERRGEKCGNKVGDRTAGFCKHHDGLQKRRKTASGAALGVGGSVEAGNYDSESELGGGMDELQTPGARPFIAKSKELHYAQASKIEDEGFRRAQESVWHLKRIKLPKPKAGEPPPP----------PIPDDPKGWVFEGLPRDESSNPYKRRHKHPGGD 432          
BLAST of mRNA_P-lacustris_contig968.16003.1 vs. uniprot
Match: A0A6H5JTJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ5_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.300e-40
Identity = 105/237 (44.30%), Postives = 127/237 (53.59%), Query Frame = 0
Query:   37 NSHNAGHNTRGASRHQR----------AGAQPTIAQXXXXXXXXXXXX-----------PPQAPAGVNPSRCTAVISRGKKKGSVCGNMAGGRVAGLCQHHDGRQKXXXXXXXXXXXXXD--EAANYDSDNDVGGGVDELQTPGAEGAFARSKDTHYKRAANMTDTGFKEAQQSVWHLKK---------KPDPPXXXXXXXXXXPVPEDLLGWVTGGLPKDEESDAYKRRHKHVGGD 241
            NSH AGHNTRG    QR              PT ++    XXXXXXXX           P  +P  VNP+   A ISRG ++G  CGN  GGR AG C+HHDG QK                EA NYDS++ +GGG+D LQTPGA    A+SK+ HY  A+ + D G + AQ+SVWHLK+         +P PP          P+P+D  GWV  GLP+DE S  YKRRHKH GGD
Sbjct:  113 NSHGAGHNTRGVGGQQRQQQGTPELPVTDRFPTTSREAQQXXXXXXXXXXXXXXXXXXXPDSSP--VNPAVRVAFISRGARRGEKCGNKVGGRTAGFCKHHDGLQKGRKTASGAALGVGGSVEAGNYDSESGLGGGMDGLQTPGARPFIAKSKELHYAPASKIEDEGSRRAQESVWHLKRIKLPQPKAGEPSPP----------PIPDDPKGWVFEGLPRDESSGPYKRRHKHPGGD 337          
BLAST of mRNA_P-lacustris_contig968.16003.1 vs. uniprot
Match: A0A6H5KNU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU4_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.650e-27
Identity = 79/172 (45.93%), Postives = 104/172 (60.47%), Query Frame = 0
Query:   34 YAANSHNAGHNTRGASRHQRAGAQPTIAQXXXXXXXXXXXXPPQAPAGVNPSRCTAVISRGKKKGSVCGNMAGGRVAGLCQHHDGRQKXXXXXXXXXXXXX-----------DEAANYDSDNDVGGGVDELQTPGAEGAFARSKDTHYKRAANMTDTGFKEAQQSVWHLKKK 194
            YAA++HN G  T+G++ HQ          XXXXXXXXXXXX P +P G +PS C A+I RG+ KG  CG  AGGRV GLC HHDG +K                        D+ AN+ SD+++   VDELQT GA+   ++ + +HY+RA+ + D GF+EA +SVWHLKKK
Sbjct:   25 YAADTHNTGRTTQGSALHQAQXXXXXXXXXXXXXXXXXXXXXP-SPVGADPSVCRAIIERGQNKGKRCGKAAGGRVLGLCGHHDGTRKRLKAAGTTAAGTTAAAGLEVGAGVDDQANFGSDDELXXXVDELQTAGADAQQSKLQHSHYQRASVIEDQGFREAYESVWHLKKK 195          
BLAST of mRNA_P-lacustris_contig968.16003.1 vs. uniprot
Match: A0A6H5K5P5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P5_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 8.510e-26
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 0
Query:  135 DEAANYDSDNDVGGGVDELQTPGAEGAFARSKDTHYKRAANMTDTGFKEAQQSVWHLKKKPDPPXXXXXXXXXXPVPEDLLGWVTGGLPKDEESDAYKRRHKHVGGD 241
            D+ AN+ SD+++GGGVDELQT GA+   ++ + +HY+RA+ + D GF+EA +SVWHLKKK              P P D  GW + G+ KD ES+AYKRRHKH GGD
Sbjct:   58 DDQANFGSDDELGGGVDELQTAGADAQQSKLQHSHYQRASVIEDQGFREAYESVWHLKKKSTSKKRKAGDAPPQPAPHDERGWTSAGMKKDVESEAYKRRHKHTGGD 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig968.16003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K756_9PHAE2.970e-4348.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTJ5_9PHAE1.300e-4044.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNU4_9PHAE1.650e-2745.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5P5_9PHAE8.510e-2650.47DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig968contigP-lacustris_contig968:48525..49866 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig968.16003.1mRNA_P-lacustris_contig968.16003.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig968 48181..49866 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig968.16003.1 ID=prot_P-lacustris_contig968.16003.1|Name=mRNA_P-lacustris_contig968.16003.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=242bp
MGSEGSDSSLDSREDSDSEDEFRLETEPRCAPQYAANSHNAGHNTRGASR
HQRAGAQPTIAQPQQQQPQQQQQQPPQAPAGVNPSRCTAVISRGKKKGSV
CGNMAGGRVAGLCQHHDGRQKRKRRAAAVSSAAEDEAANYDSDNDVGGGV
DELQTPGAEGAFARSKDTHYKRAANMTDTGFKEAQQSVWHLKKKPDPPKP
KPGKPVPAPVPEDLLGWVTGGLPKDEESDAYKRRHKHVGGDH
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