prot_P-lacustris_contig966.15992.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig966.15992.1
Unique Nameprot_P-lacustris_contig966.15992.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length250
Homology
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BLAST of mRNA_P-lacustris_contig966.15992.1 vs. uniprot
Match: A0A6H5LFG5_9PHAE (Ribonuclease Z n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFG5_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.170e-30
Identity = 137/253 (54.15%), Postives = 148/253 (58.50%), Query Frame = 0 
Query:    1 MAADPLLKFEMLPTARRPQMDASEALTWERSLNTTRTSLRRLERVRSRXXXXXXXXXXXXXXXXXXXXXXXXXXPPSFGGIRRGGGEPIDAAPFLTPAGASQSEVAFLGTGSAMPSKYRNVTGMLVRLSPTSPAPGPPSKGAATAAEARMAGALKGLATAAAMAAAAETPVAAAAAKVLGVFNGAWAPGGGAGVVGEPELGQQ----------GKEAEGDVAAGAGELRGGSILLDDGEGSMGQLLRMNGGSS 243
            MAA PLLKFEMLPTA+RPQMDA+EALTW+RS N T+TSLRRLE +RS     XXXXXXXXXXXXXXXXXXXXXX       R+ G  P     FL PAGAS SEVAFLGTGSA+PSKYRNVTGMLVRLSPT PA                                  +P    AA V+GV + A A GG  G  G                 GK A    AA  G+   GSILLD GEGSMGQL RM G SS
Sbjct:  484 MAAVPLLKFEMLPTAKRPQMDATEALTWDRSRNNTQTSLRRLESIRSGPRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKTGQAP---GAFLLPAGASNSEVAFLGTGSALPSKYRNVTGMLVRLSPTDPA----------------------------------SP----AAGVVGVSDIAEARGGLRGGDGXXXXXXXXXXXXXXXXXGKNA----AAFGGD---GSILLDAGEGSMGQLWRMYGDSS 688
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BLAST of mRNA_P-lacustris_contig966.15992.1 vs. uniprot
Match: D8LJL4_ECTSI (Ribonuclease Z n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL4_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 2.470e-29
Identity = 124/244 (50.82%), Postives = 135/244 (55.33%), Query Frame = 0 
Query:    1 MAADPLLKFEMLPTARRPQMDASEALTWERSLNTTRTSLRRLERVRSRXXXXXXXXXXXXXXXXXXXXXXXXXXPPSFGGIRRGGGEPIDAAPFLTPAGASQSEVAFLGTGSAMPSKYRNVTGMLVRLSPTSPAPGPPSKGAATAAEARMAGALKGLATAAAMAAAAETPVAAAAAKVLGVFNGAWAPGGGAGVVGEPELGQQGKEAEGDVAAGAGELRGGSILLDDGEGSMGQLLRMNGGSSS 244
            MAA PLLKFEMLP  +RPQMDA+EALTW+RS ++T+ SLRRLE +RS          XXXXXXXXXXXX  XXX       R+ G  P   APFL PAGAS SEVAFLGTGSA+PSKYRNVTGMLVRL PT PA          +AEAR     +GL                                 G                EGD AA  G   GGSILLD GEGSMGQL RM G SSS
Sbjct:  427 MAAVPLLKFEMLPAPKRPQMDATEALTWDRSRDSTQASLRRLESIRSGPRSRSPSPCXXXXXXXXXXXXPGXXXXXXX--XRKTGQVP---APFLLPAGASNSEVAFLGTGSALPSKYRNVTGMLVRLMPTDPASXXXXXXXXDSAEAR-----EGLC--------------------------------GGHXXXXXXXXXXXXXXEGDNAAAFG--GGGSILLDAGEGSMGQLWRMYGDSSS 626
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig966.15992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LFG5_9PHAE2.170e-3054.15Ribonuclease Z n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
D8LJL4_ECTSI2.470e-2950.82Ribonuclease Z n=1 Tax=Ectocarpus siliculosus TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12553RIBONUCLEASE Zcoord: 3..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig966contigP-lacustris_contig966:61700..64060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig966.15992.1mRNA_P-lacustris_contig966.15992.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig966 59094..64060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig966.15992.1 ID=prot_P-lacustris_contig966.15992.1|Name=mRNA_P-lacustris_contig966.15992.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=250bp
MAADPLLKFEMLPTARRPQMDASEALTWERSLNTTRTSLRRLERVRSRPR
SRSRSPSRSSRSPSRSPPGSPRRSPPSFGGIRRGGGEPIDAAPFLTPAGA
SQSEVAFLGTGSAMPSKYRNVTGMLVRLSPTSPAPGPPSKGAATAAEARM
AGALKGLATAAAMAAAAETPVAAAAAKVLGVFNGAWAPGGGAGVVGEPEL
GQQGKEAEGDVAAGAGELRGGSILLDDGEGSMGQLLRMNGGSSSGEDIGS
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