prot_P-lacustris_contig963.15975.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig963.15975.1
Unique Nameprot_P-lacustris_contig963.15975.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length432
Homology
BLAST of mRNA_P-lacustris_contig963.15975.1 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE)

HSP 1 Score: 643 bits (1659), Expect = 1.120e-229
Identity = 327/428 (76.40%), Postives = 355/428 (82.94%), Query Frame = 0
Query:    1 MLSEAIAWLRYIVLLKWPYSGEVYLFSLVTSACVKGRGGKHKSEGLLLPMFASVFMATTGSGVVGPVIMRDPPLFLNNDLLVTCIIAFFFISIVFDPYVVNFIKTPHLWKAMALMSTTSRMNKICFIVDYALTKFPASQYYPIALFGPILIGLARGIGGALVPCDKGLSCVRKDLPWTVQLCFIVAAFYHIVANDTYILGGIVRGALGLEDASREDIRLIAVTFGVIVTVVQTYYAPNFNPFTPAHKASACVLYAVTGFPNAPTTVAVAKSTDLGTDKGNXXXXXXXXXXXXXXXXXEIGSERALYDLKTRKQIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCSPLRAAVTETGLLLENVCLTPFRPQEVPVLPAAKKKVEEADGAEVVWNSPIPKKIAAS 428
            MLSEAI WLRYIVLLKWPYS E YLFSLVTSACVK RG   K EGLLLPMF    M TTGSGVVGP++MRDPPLFLNNDLLVTCI+ FF +S+VFDPYVVNFIKTPHLWKAMAL+STTSRMNKICFIVDYALTKFP S YYPIALFGPI+IGLARGIGG+LVP DKGLS + KDLPW VQLCF VA FYHIVANDTYILGG+VRGALGLE+A+REDIRLIAVTFGV+VTV+QTYYAP FNPFTPAH+A++  LYAVTG P    T+ V +ST   TD                    + G    LYDLKTRK+IQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGC+PLRAAVTETG L+       +R +EVPVLPAAKKKVE  DGAEV+W+SP PKK+AAS
Sbjct:    1 MLSEAIEWLRYIVLLKWPYSSEFYLFSLVTSACVKARGKSTKFEGLLLPMFVHTLMCTTGSGVVGPLLMRDPPLFLNNDLLVTCIMVFFLVSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMPKTAITIEVPRSTPS-TDADKAKDNGGNGAEETKGKEKKEGEGEGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCTPLRAAVTETGSLVV------YRGKEVPVLPAAKKKVEGDDGAEVLWSSPAPKKLAAS 421          
BLAST of mRNA_P-lacustris_contig963.15975.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 3.380e-184
Identity = 270/359 (75.21%), Postives = 294/359 (81.89%), Query Frame = 0
Query:   69 MRDPPLFLNNDLLVTCIIAFFFISIVFDPYVVNFIKTPHLWKAMALMSTTSRMNKICFIVDYALTKFPASQYYPIALFGPILIGLARGIGGALVPCDKGLSCVRKDLPWTVQLCFIVAAFYHIVANDTYILGGIVRGALGLEDASREDIRLIAVTFGVIVTVVQTYYAPNFNPFTPAHKASACVLYAVTGFPNAPTTVAVAKSTDLGTDKGNXXXXXXXXXXXXXXXXXEIGSERALYDLKTRKQIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCSPLRAAVTETGLLLENVCLTPFRPQEVPVLPAAKKKVEEADGAEVVWNSPIPKKIAA 427
            MRDPPLFLNNDLLVTCI+ FF  S+VFDPYVVNFIKTPHLWKAMAL+STTSRMNKICFIVDYALTKFP S YYPIALFGPI+IGLARGIGG+LVP DKGLS + KDLPW VQLCF VA FYH+VANDTYILGG+VRGALGLE+A+REDIRLIAVTFGV+VTV+QTYYAP FNPFTPAH+A    LY VTG P    T+ V +ST   TD                    + G    LYDLKTRK+IQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGC+PLRAAVTETG L+       +R +EVPVLPAAKKKVE  DG EV+W+SP PKK+AA
Sbjct:    1 MRDPPLFLNNDLLVTCIMVFFLFSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQA----LYTVTGMPKTAITIEVPRSTPS-TDADKAKDNGGNGAEEAKDKEKKEGEGGGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCTPLRAAVTETGSLVV------YRGKEVPVLPAAKKKVEGDDGPEVLWSSPAPKKLAA 348          
BLAST of mRNA_P-lacustris_contig963.15975.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 1.730e-30
Identity = 76/217 (35.02%), Postives = 115/217 (53.00%), Query Frame = 0
Query:   55 FMATTGSGVVGPVIMRDPPLFLNNDLLVTCIIAFFFISIVFDPYVVNFIKTPHLWKAMALMSTTSRMNKICFIVDYALTKFPASQYYPIALFGPILIGLARGIGGALVPCDKGLSCVRKDLPWTVQLCFIVAAFYHIVANDTYILGGIVR--GALGLEDASREDIRLIAVTFGVIVTVVQTYYAPNFNPFTPAHKASACVLYAVTGFPNAPTTVAVA 269
            +M   G G++ P ++  PP+   NDL+V  +   +F+S   +  +   I TP + + + ++S   R N +C IV  + +     ++YPIAL+GPIL+G   G GG  +P DKGL  ++   PW +Q  F  + F+++   D  + G  +R   AL L+       R I   F  +V + QT  +P FNPFTP H     V+Y VTG PN P  VAVA
Sbjct:   80 YMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWFVSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNV-GPYLRDAAALFLDGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHN----VVYTVTGVPN-PEAVAVA 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig963.15975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JUV5_9PHAE1.120e-22976.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FML9_ECTSI3.380e-18475.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2H0_ECTSI1.730e-3035.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 219..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 158..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 238..431
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..79
NoneNo IPR availableTMHMMTMhelixcoord: 219..236
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig963contigP-lacustris_contig963:3968..11429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig963.15975.1mRNA_P-lacustris_contig963.15975.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig963 3931..12198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig963.15975.1 ID=prot_P-lacustris_contig963.15975.1|Name=mRNA_P-lacustris_contig963.15975.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=432bp
MLSEAIAWLRYIVLLKWPYSGEVYLFSLVTSACVKGRGGKHKSEGLLLPM
FASVFMATTGSGVVGPVIMRDPPLFLNNDLLVTCIIAFFFISIVFDPYVV
NFIKTPHLWKAMALMSTTSRMNKICFIVDYALTKFPASQYYPIALFGPIL
IGLARGIGGALVPCDKGLSCVRKDLPWTVQLCFIVAAFYHIVANDTYILG
GIVRGALGLEDASREDIRLIAVTFGVIVTVVQTYYAPNFNPFTPAHKASA
CVLYAVTGFPNAPTTVAVAKSTDLGTDKGNGNGNGSEETKNKEKNENEIG
SERALYDLKTRKQIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVK
AGGSGLASCAFLPKVLSNGCSPLRAAVTETGLLLENVCLTPFRPQEVPVL
PAAKKKVEEADGAEVVWNSPIPKKIAASFSL*
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