prot_P-lacustris_contig962.15973.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig962.15973.1
Unique Nameprot_P-lacustris_contig962.15973.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length182
Homology
BLAST of mRNA_P-lacustris_contig962.15973.1 vs. uniprot
Match: D7G256_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G256_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.450e-11
Identity = 76/175 (43.43%), Postives = 88/175 (50.29%), Query Frame = 0
Query:   19 AARLLRRVEVRTPAEEQEEAAIRKSQETPSPCNPPLRNSSNGSISR-YGHANGGGD---GWRQASEDPDWD-PGMMAAGSRGTRRQGKGPRGRSFFASSEXXXXXXXXXRHQGRIAAGSDAEDDPARNHNGHRPSKVAGAV------DTEPGREISDIDRRLGELHEFLRRAKEG 182
            A RLLRRVE+RTPAEE+E  A+RKSQE  S  N P+R S + +  R Y H +G G    G  +   DPD   PG+ A G R T R G+            XXXXXXXXX                                      + E GREISDIDRRLGELHEFL+RAKEG
Sbjct:  334 ATRLLRRVELRTPAEEEEAEAVRKSQELTSSYNAPVRESKSAASPRNYRHVSGSGGALVGRMRGGNDPDHHYPGVAAGGVRATERTGQEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEMEAGREISDIDRRLGELHEFLKRAKEG 508          
BLAST of mRNA_P-lacustris_contig962.15973.1 vs. uniprot
Match: A0A6H5JSS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS0_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.140e-8
Identity = 75/158 (47.47%), Postives = 86/158 (54.43%), Query Frame = 0
Query:   39 AIRKSQETPSPCNPPLRNS-SNGSISRYGHANGGGD---GWRQASEDPDWD-PGMMAAGSRGTRR--QGKGPRGRSFFASSEXXXXXXXXXRHQGRIAAGSDAEDDPARNHNGHRPSKVAGAVDT-------EPGREISDIDRRLGELHEFLRRAKEG 182
            A R+SQE  S  N PLR S S  S S   H +G G    G  +   DP+   PG+ A G R T R  QG+G R ++F     XXXXXXXXX  + R AA     DD     +   P   A AVD        E GREISDIDRRLGELHEFL+RAKEG
Sbjct:  504 APRQSQELTSSYNAPLRESKSTASPSNRRHVSGSGGILVGRTREGNDPNHHHPGVAAGGVRATERTGQGEGQRRQAFXXXXXXXXXXXXXXXPRLRGAAIDAPADD---GQDPQEPPSFA-AVDXXXXXGEMEAGREISDIDRRLGELHEFLKRAKEG 657          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig962.15973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G256_ECTSI3.450e-1143.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSS0_9PHAE4.140e-847.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig962contigP-lacustris_contig962:58179..59205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig962.15973.1mRNA_P-lacustris_contig962.15973.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig962 58179..59206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig962.15973.1 ID=prot_P-lacustris_contig962.15973.1|Name=mRNA_P-lacustris_contig962.15973.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=182bp
GSFASCSSLRSSTTATAAAARLLRRVEVRTPAEEQEEAAIRKSQETPSPC
NPPLRNSSNGSISRYGHANGGGDGWRQASEDPDWDPGMMAAGSRGTRRQG
KGPRGRSFFASSEETARQQQQQRHQGRIAAGSDAEDDPARNHNGHRPSKV
AGAVDTEPGREISDIDRRLGELHEFLRRAKEG
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