prot_P-lacustris_contig960.15963.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig960.15963.1
Unique Nameprot_P-lacustris_contig960.15963.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length372
Homology
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BLAST of mRNA_P-lacustris_contig960.15963.1 vs. uniprot
Match: D7G1W3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W3_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 1.070e-149
Identity = 248/357 (69.47%), Postives = 276/357 (77.31%), Query Frame = 0 
Query:    1 MSKARSYILSEHREETIGALAEMLRGENYRETGLAQRLLGVLARLSRRRSAQEAIASSSFVDWAAQMLGSHSSQGKGSRDPCPLILRRTTEILGNVSGTTPGKAAALAATPDLLRTIGGLLEHQDIQVRSSAVRGLGLLLGAPEARERALEAGMDALLEDLGSRGSSGGGSSVFVREIESLLDLLGGKHSPGTEEGEDGRRYSDASEG--QEDAEDFDSMSEDESEEASVVTYFVQATNAPCGEELLRERYQFSPAEEKEENIDCSSGARPWGAEEEELICGGYNTKRPAGYLGAGESRGAGNEEPRMPTPEAGKATLIRGEEKVYDSRRPGLPEEMQSRPRIPRTPAGCVPTPDLL 355
            MSKARSY+L E  EETI  LAE+L GENYRET LA+RLLGVL RLSRRRSAQEAIASSSFVDWAA+ML S SSQG G+RDPCPL + R T ILGN SG+  G+ AALAA+PDLLR+ G LLEH D QVR+SAVRGL LLLGA E RERALE GMDALL++LGS   S    S F   I+SLLDL+G    P  EEGEDGRR    S G  QEDA D D +S++ES EA VV+++VQ TNAPCGE+LLRERY+ S AE KEE I CSSG  PWG EEEEL+CGG  TK PA   GAGES+GA N  PR+PTPEAG ATLIRGEEKVYD RRPGLP+EMQSRPRIPRTPAG +   D L
Sbjct:  349 MSKARSYMLGEKCEETIEILAELLSGENYRETSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLLSCSSQGPGARDPCPLFVLRVTGILGNTSGSVSGRTAALAASPDLLRSFGNLLEHDDAQVRTSAVRGLKLLLGAREGRERALEMGMDALLQNLGSCEGSDNNDSAFEHNIQSLLDLMGDTLDPDAEEGEDGRRQLSESGGGGQEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTKAPARCPGAGESKGANNHTPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPAGSISVSDPL 705
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BLAST of mRNA_P-lacustris_contig960.15963.1 vs. uniprot
Match: A0A6H5KFS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS9_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 1.730e-91
Identity = 174/279 (62.37%), Postives = 201/279 (72.04%), Query Frame = 0 
Query:   14 EETIGALAEMLRGENYRETGLAQRLLGVLARLSRRRSAQEAIASSSFVDWAAQMLGSHSSQGKGSRDPCPLILRRTTEILGNVSGTTPGKAAALAATPDLLRTIGGLLEHQDIQVRSSAVRGLGLLLGAPEARERALEAGMDALLEDLGSRGSSGGGSSVFVREI----ESLLDLLGGKHSPGTEEGEDGRRYSDASEGQEDAEDFDSMSEDESEEASVVTYFVQATNAPCGEELLRERYQFSPAEEKEENIDCSSGARPWGAEEEELICGGYNTKRPA 288
            EETI  L E+L GE Y++T LA+RLLGVL RLSRRRSAQEAIASSSFVDWAA+ML S S QG G+R PCPL + R T+ILGNVSG   G+ AALAA+PDLLR+ G LLEH D QVR+SAVRGL LLLGA EARERALE GMDALL++LGS   S    S F   I    E ++D +GG    G     +G        GQEDA D D +S++ES EA VV+++VQ TNAPCGE+LLRERY+ S AE KEE I CSSG   WG EEEEL+CGG  TK PA
Sbjct:  602 EETIETLVELLSGEKYQKTSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLESCSFQGAGTRHPCPLFVLRVTDILGNVSGRVSGRTAALAASPDLLRSFGNLLEHDDAQVRASAVRGLKLLLGAREARERALEMGMDALLQNLGSCEGSDNSDSAFEHNIQVKREQVIDTVGGG---GILWAVNGIHAEVTGGGQEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGATWGGEEEELVCGGIRTKPPA 877
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig960.15963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1W3_ECTSI1.070e-14969.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFS9_9PHAE1.730e-9162.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..191
e-value: 1.1E-9
score: 39.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 13..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig960contigP-lacustris_contig960:37389..44258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig960.15963.1mRNA_P-lacustris_contig960.15963.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig960 36964..50291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig960.15963.1 ID=prot_P-lacustris_contig960.15963.1|Name=mRNA_P-lacustris_contig960.15963.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=372bp
MSKARSYILSEHREETIGALAEMLRGENYRETGLAQRLLGVLARLSRRRS
AQEAIASSSFVDWAAQMLGSHSSQGKGSRDPCPLILRRTTEILGNVSGTT
PGKAAALAATPDLLRTIGGLLEHQDIQVRSSAVRGLGLLLGAPEARERAL
EAGMDALLEDLGSRGSSGGGSSVFVREIESLLDLLGGKHSPGTEEGEDGR
RYSDASEGQEDAEDFDSMSEDESEEASVVTYFVQATNAPCGEELLRERYQ
FSPAEEKEENIDCSSGARPWGAEEEELICGGYNTKRPAGYLGAGESRGAG
NEEPRMPTPEAGKATLIRGEEKVYDSRRPGLPEEMQSRPRIPRTPAGCVP
TPDLLGERRRQSGGAAADIKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold