prot_P-lacustris_contig96.15961.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig96.15961.1
Unique Nameprot_P-lacustris_contig96.15961.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length135
Homology
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Match: A0A6H5J624_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J624_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.760e-38
Identity = 75/136 (55.15%), Postives = 92/136 (67.65%), Query Frame = 0
Query:    4 GGPGVSEQFVFSRLIDSLPSPEYDVTKQILGAANSLPRDALVSQLSTRYSDLKRQWEQETERKKGGEQAYFASDGNG----GGTGRKSKGXXXXXXXXRGKGNRVSHQRCFQCGYRGHMKQDCTTKQEDWLERCDT 135
            GG  V++QFVF+RLIDSLP+PEY+VTKQ L     L RD LV QLSTR++ L  +W +E E+  GGEQAY A DG G     G GR SK          G  +RV H+RCF+C +RGH K DCTTK+ED+LE+CDT
Sbjct:  163 GGATVNDQFVFARLIDSLPNPEYEVTKQTLSVVQPLTRDILVQQLSTRFNLLTEEWRKEGEKGSGGEQAYIAGDGTGKGRQAGGGRGSKSNGRGSKKKAGTDDRVDHRRCFRCNHRGHRKPDCTTKEEDFLEQCDT 298          
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Match: A0A6H5JY82_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY82_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 6.130e-38
Identity = 71/136 (52.21%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    4 GGPGVSEQFVFSRLIDSLPSPEYDVTKQILGAANSLPRDALVSQLSTRYSDLKRQWEQETERKKGGEQAYFASDGNG----GGTGRKSKGXXXXXXXXRGKGNRVSHQRCFQCGYRGHMKQDCTTKQEDWLERCDT 135
            GG  V++QFVF+RL+DSLP+PEY+VTKQ L     L RD LV Q STR++ L  +W ++ E+  GGEQAY A +G G     G GR SK          G  +RV H+RCF+C +RGH K DCTTK+ED+LE+CDT
Sbjct:   13 GGATVNDQFVFARLVDSLPNPEYEVTKQTLSVVKPLTRDILVQQFSTRFNLLTEEWRKKGEKGSGGEQAYIAGNGTGKGRQAGGGRGSKSNGRGSKKKAGTDDRVDHRRCFRCNHRGHRKPDCTTKEEDFLEQCDT 148          
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Match: A0A6H5JNY2_9PHAE (CCHC-type domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY2_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.480e-37
Identity = 75/136 (55.15%), Postives = 92/136 (67.65%), Query Frame = 0
Query:    4 GGPGVSEQFVFSRLIDSLPSPEYDVTKQILGAANSLPRDALVSQLSTRYSDLKRQWEQETERKKGGEQAYFASDGNG----GGTGRKSKGXXXXXXXXRGKGNRVSHQRCFQCGYRGHMKQDCTTKQEDWLERCDT 135
            GG  V++QFVF+RLIDSLP+PEY+VTKQ L     L RD LV QLSTR++ L  +W +E E+  GGEQAY A DG G     G GR SK          G  +RV H+RCF+C +RGH K DCTTK+ED+LE+CDT
Sbjct:  291 GGATVNDQFVFARLIDSLPNPEYEVTKQTLSVVQPLTRDILVQQLSTRFNLLTEEWRKEGEKGSGGEQAYIAGDGTGKGRQAGGGRGSKSNGRGSKKKAGTDDRVDHRRCFRCNHRGHRKPDCTTKEEDFLEQCDT 426          
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Match: A0A6H5KEL4_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEL4_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 7.390e-37
Identity = 74/136 (54.41%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    4 GGPGVSEQFVFSRLIDSLPSPEYDVTKQILGAANSLPRDALVSQLSTRYSDLKRQWEQETERKKGGEQAYFASDGNG----GGTGRKSKGXXXXXXXXRGKGNRVSHQRCFQCGYRGHMKQDCTTKQEDWLERCDT 135
            GG  V++QFVF+RLIDSLP+PEY+VTKQ L     L RD  V QLSTR++ L  +W +E E+  GGEQAY A DG G     G GR SK          G  +RV H+RCF+C +RGH K DCTTK+ED+LE+CDT
Sbjct:  314 GGATVNDQFVFARLIDSLPNPEYEVTKQTLSVVQPLTRDIFVQQLSTRFNLLTEEWRKEGEKGSGGEQAYIAGDGTGKGRQAGGGRGSKSNGRGSKKKAGTDDRVDHRRCFRCNHRGHRKPDCTTKEEDFLEQCDT 449          
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Match: A0A6H5JRX0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRX0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.500e-35
Identity = 70/136 (51.47%), Postives = 88/136 (64.71%), Query Frame = 0
Query:    4 GGPGVSEQFVFSRLIDSLPSPEYDVTKQILGAANSLPRDALVSQLSTRYSDLKRQWEQETERKKGGEQAYFASDGNG----GGTGRKSKGXXXXXXXXRGKGNRVSHQRCFQCGYRGHMKQDCTTKQEDWLERCDT 135
            GG  V++QFVF+RLIDSLP+PEY+VTKQ L     L RD LV QLSTR++ L  +W +E E+   GEQAY   DG G     G GR SK          G  +RV H+RCF+C +RGH + DCTTK+ED+L +C T
Sbjct:   47 GGATVNDQFVFARLIDSLPNPEYEVTKQTLSVVQPLTRDILVQQLSTRFNLLTEEWRKEGEKGSRGEQAYITGDGTGKGRQAGGGRGSKSNGRGSKKKAGTDDRVDHRRCFRCNHRGHREPDCTTKEEDFLAQCGT 182          
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Match: A0A6H5JXJ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.910e-18
Identity = 50/100 (50.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:   42 DALVSQLSTRYSDLKRQWEQETERKKGGEQAYFASDGNG------GGTGRKSKGXXXXXXXXRGKGNRVSHQRCFQCGYRGHMKQDCTTKQEDWLERCDT 135
            + LV QLSTR++ L  +W +E  +   GEQAY A DG G      GG GRKS G         G   RV H+RCF+C +RGH K DCTTK+ED+LE+CDT
Sbjct:  317 EGLVQQLSTRFNLLTEEWRKEGGKGSRGEQAYIAGDGTGKGRQAGGGCGRKSNGRGSKKKA--GTDERVDHRRCFRCNHRGHRKPDCTTKEEDFLEQCDT 414          
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Match: A0A6H5JE80_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE80_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 6.820e-14
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    4 GGPGVSEQFVFSRLIDSLPSPEYDVTKQILGAANSLPRDALVSQLSTRYSDLKRQWEQETERKKGGE 70
            GG  V++QFVF+RLIDSLP+PEY+VTKQ L     L RD LV QLSTR++ L  +W +E E+  GGE
Sbjct:  334 GGATVNDQFVFARLIDSLPNPEYEVTKQTLSVVQPLTRDILVQQLSTRFNLLTEEWRKEGEKGSGGE 400          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig96.15961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5J624_9PHAE1.760e-3855.15CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JY82_9PHAE6.130e-3852.21CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JNY2_9PHAE1.480e-3755.15CCHC-type domain-containing protein n=5 Tax=Ectoca... [more]
A0A6H5KEL4_9PHAE7.390e-3754.41CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JRX0_9PHAE1.500e-3551.47CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JXJ0_9PHAE4.910e-1850.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JE80_9PHAE6.820e-1458.21Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.60.10coord: 79..131
e-value: 2.2E-5
score: 26.3
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 108..122
score: 9.768
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 100..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig96contigP-lacustris_contig96:257801..258205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig96.15961.1mRNA_P-lacustris_contig96.15961.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig96 257801..258205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig96.15961.1 ID=prot_P-lacustris_contig96.15961.1|Name=mRNA_P-lacustris_contig96.15961.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=135bp
MSSGGPGVSEQFVFSRLIDSLPSPEYDVTKQILGAANSLPRDALVSQLST
RYSDLKRQWEQETERKKGGEQAYFASDGNGGGTGRKSKGGRGGKGNDRGK
GNRVSHQRCFQCGYRGHMKQDCTTKQEDWLERCDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf