prot_P-lacustris_contig958.15941.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig958.15941.1
Unique Nameprot_P-lacustris_contig958.15941.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length177
Homology
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BLAST of mRNA_P-lacustris_contig958.15941.1 vs. uniprot
Match: D7FST0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST0_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.650e-13
Identity = 51/144 (35.42%), Postives = 67/144 (46.53%), Query Frame = 0 
Query:   23 LMSVIEAVTGVCHPSTIRRLLYQTDSDGMNFLMHCAACTVGATGGEGIGGPCSGRALAGDDKGSESTMFSAPATGGENVGESLS--ALQGSDKGTKFERANPTAGEA----------VRRDPASPMFNTAFEFVEKSLWKVQVR 154
            L +V   V   C P T+R LLY+TD++G+NFLMH  A                                 AP  GGEN+G S S  AL G+ +     + + + GE+          +  DPA P+FN AFEFV+ SLWK QVR
Sbjct:    3 LRTVANTVRRGCDPQTVRHLLYETDAEGLNFLMHSVAYRA---------------------------CQPAPVRGGENLGVSSSGSALPGASEDNVHLKRSSSIGESSVLGLGNDVVLPPDPAVPLFNVAFEFVQCSLWKAQVR 119
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig958.15941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FST0_ECTSI2.650e-1335.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig958contigP-lacustris_contig958:66321..67461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig958.15941.1mRNA_P-lacustris_contig958.15941.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig958 66235..69143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig958.15941.1 ID=prot_P-lacustris_contig958.15941.1|Name=mRNA_P-lacustris_contig958.15941.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=177bp
MSKAHNGKNILMYSAQAGNARALMSVIEAVTGVCHPSTIRRLLYQTDSDG
MNFLMHCAACTVGATGGEGIGGPCSGRALAGDDKGSESTMFSAPATGGEN
VGESLSALQGSDKGTKFERANPTAGEAVRRDPASPMFNTAFEFVEKSLWK
VQVRADLSQDQSCLCTSWTDRYDAAP*
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