prot_P-lacustris_contig952.15911.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig952.15911.1
Unique Nameprot_P-lacustris_contig952.15911.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length114
Homology
[Close]
BLAST of mRNA_P-lacustris_contig952.15911.1 vs. uniprot
Match: A0A6H5JZC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.100e-33
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 0 
Query:    1 TIFTPDVLSKLSVYCLDGNHRIQALRDLKGPEFRVGCRLYLHFDDSETINALARSANGVTEATAEVTTYDRIFSTKKAIEAIMAKKGF-TDPNKVTGSNLAEAYRK 105
            T++  DVLS L VYCLDGNHR++AL  L G EF + CR YLHFDD+  +NALARS N  TEATA+ TTYDRIFS KKA+EAIMA +    D +KVT   L++AY+K
Sbjct:   67 TVWNSDVLSSLEVYCLDGNHRLRALTILYGGEFELECRCYLHFDDAVMVNALARSVNNTTEATAKTTTYDRIFSCKKALEAIMAAENLGNDASKVTARMLSDAYKK 172
[Close]
BLAST of mRNA_P-lacustris_contig952.15911.1 vs. uniprot
Match: A0A6H5JXW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW4_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.470e-27
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 0 
Query:    1 TIFTPDVLSKLSVYCLDGNHRIQALRDLKGPEFRVGCRLYLHFDDSETINALARS---------ANGVTEATAEVTTYDRIFSTKKAIEAIMAKKGF-TDPNKVTGSNLAEAYRK 105
            T++  DVLS L VYCLDGNHR++AL    G +F + CR YLHFDD+  +NALAR+          N  T ATA+ TTYDRIFS KKA+EAIMA +    D +KVT   L++AY+K
Sbjct:  109 TVWNSDVLSSLEVYCLDGNHRLRALTIFYGGDFELECRCYLHFDDAIMVNALARNDVSPEYIAGVNSTTGATAKTTTYDRIFSCKKALEAIMAAENLGNDASKVTARMLSDAYKK 223
[Close]
BLAST of mRNA_P-lacustris_contig952.15911.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.130e-23
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 0 
Query:    1 TIFTPDVLSKLSVYCLDGNHRIQALRDLKGPEFRVGCRLYLHFDDSETINALARSANGVTEATAEVTTYDRIFSTK 76
            T++  DVLS L VYCLDGNHR++ALR L G EF + CR YLHFDD+  +NALARS N  T+ATA+ TTYDRIFS K
Sbjct:  147 TVWNSDVLSSLEVYCLDGNHRVRALRILYGGEFELECRCYLHFDDAVMVNALARSLNNTTKATAKTTTYDRIFSCK 222
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig952.15911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZC6_9PHAE2.100e-3361.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXW4_9PHAE1.470e-2753.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB1_9PHAE1.130e-2365.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig952contigP-lacustris_contig952:32488..33627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig952.15911.1mRNA_P-lacustris_contig952.15911.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig952 32488..33627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig952.15911.1 ID=prot_P-lacustris_contig952.15911.1|Name=mRNA_P-lacustris_contig952.15911.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=114bp
TIFTPDVLSKLSVYCLDGNHRIQALRDLKGPEFRVGCRLYLHFDDSETIN
ALARSANGVTEATAEVTTYDRIFSTKKAIEAIMAKKGFTDPNKVTGSNLA
EAYRKVRHISTII*
back to top