prot_P-lacustris_contig950.15895.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig950.15895.1
Unique Nameprot_P-lacustris_contig950.15895.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length191
Homology
BLAST of mRNA_P-lacustris_contig950.15895.1 vs. uniprot
Match: D7G0D1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D1_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 8.360e-26
Identity = 91/206 (44.17%), Postives = 108/206 (52.43%), Query Frame = 0
Query:    1 QVASVCLGIEHLINKRRRATKG-GEPTRVSSPEQQTASPPFRDNTPDS----------FHRGRDQASSCRLCESTLRVLSYARLHGKRCRQRXXXXXXXXXXXXXXXEANGDS--SNTQATAAVVDCEACRMWSMVVDRCAVLGVPLP--IIGNPAGGGGGGCTVGVAGRVENGR-AASTTVAATASGDGADEAVLPPAGKVLYNE 190
            QVASVC+GIEHL+NKRRR+TK  G   RV  P  Q A   FRD + D                D  SSCRLCESTLRVLS A LH +RCR +                 NG+S  +N +       C+ACRMWSMV +RCA LG+ L   ++    G   GG  VG  GRV+  R A   T AATAS    D   L   G+VLY+E
Sbjct:   30 QVASVCMGIEHLMNKRRRSTKRRGGAARVFPPVGQQARL-FRDKSSDDAGDSCGGDHQXXXXXDHPSSCRLCESTLRVLSTALLHVRRCRHQQKQKQQHLD--------NGESINNNNKDVPTASGCDACRMWSMVGERCASLGISLSNNLLFAANGSIEGGAGVG-GGRVDGSRLAGGATTAATASEP--DGPALRVVGRVLYHE 223          
BLAST of mRNA_P-lacustris_contig950.15895.1 vs. uniprot
Match: A0A6H5KZ70_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ70_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.100e-22
Identity = 107/209 (51.20%), Postives = 120/209 (57.42%), Query Frame = 0
Query:    1 QVASVCLGIEHLINKRRRATKG-GEPTRVSSPE-QQTASPPFRDNTP----DSF---HR---GRDQASSCRLCESTLRVLSYARLHGKRCRQRXXXXXXXXXXXXXXXEANGDSSNTQATAAVVDCEACRMWSMVVDRCAVLGVPLP------IIGNPAGGGGGGCTVGVAGRVENGR-AASTTVAATASGDGADEAVLPPAGKVLYNE 190
            QVASVC+GIEHL+NKRRR+TKG G   RVS P  QQT    FRD +     DS    H+     D  SSCRLCESTLRVLS A LH +RC  + XXXXXXXXXXXXXX  N D       +    C+ACRMWS V +RC+ LG+ LP        GN  G  G G      GRVE  R A   T AATAS     E  L   G+V YNE
Sbjct:   30 QVASVCMGIEHLMNKRRRSTKGRGGAARVSPPVGQQTRL--FRDKSNGDAGDSCSGDHQCGGDHDHPSSCRLCESTLRVLSTALLHVRRCLHQQXXXXXXXXXXXXXX--NKDVPQAPPASG---CDACRMWSTVGERCSSLGISLPNNILFAASGNIEGEAGDG-----GGRVECNRLAGGATTAATASEPDGPE--LRVVGRVFYNE 224          
BLAST of mRNA_P-lacustris_contig950.15895.1 vs. uniprot
Match: A0A6H5KLU7_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.400e-21
Identity = 80/203 (39.41%), Postives = 95/203 (46.80%), Query Frame = 0
Query:    1 QVASVCLGIEHLINKRRRATKGG----EPTRVSSPEQQTASPPFRDNTPDSFHRGRDQASSCRLCESTLRVLSYARLHGKRCRQRXXXXXXXXXXXXXXXEANGDSSNTQATAAVVD----CEACRMWSMVVDRCAVLGVPLPIIGNPAGGG-----GGGCTVGVAGRVENGRAASTTVAATASGDGADEAVLPPAGKVLYNE 190
            QVASVCLGIEHL+NKRR+  KG      P   +  +Q   S    D        GRD    CRLCESTLRVLS A LH KRCR                 +     +N +A  AV      C+ACRMWS V D CA LG+P     N +        GGG   GV G    G +   T  +T   D  DE++    G+VL NE
Sbjct:   29 QVASVCLGIEHLMNKRRKCAKGAATRVRPAPPAGQQQARLSRESGDARDSCSSDGRDHQHPCRLCESTLRVLSTALLHVKRCRHNRKKHLD---------DDKKSGNNARAPPAVSSSGDGCDACRMWSAVGDCCASLGIPFS---NGSSSSVLFSTGGGVEGGVGGGRVVGSSRRATTLSTGGVDPLDESL---GGRVLVNE 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig950.15895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0D1_ECTSI8.360e-2644.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ70_9PHAE1.100e-2251.20C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KLU7_9PHAE1.400e-2139.41C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig950contigP-lacustris_contig950:38973..39545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig950.15895.1mRNA_P-lacustris_contig950.15895.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig950 38973..39545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig950.15895.1 ID=prot_P-lacustris_contig950.15895.1|Name=mRNA_P-lacustris_contig950.15895.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=191bp
QVASVCLGIEHLINKRRRATKGGEPTRVSSPEQQTASPPFRDNTPDSFHR
GRDQASSCRLCESTLRVLSYARLHGKRCRQRRQQQQQPQHRRELEEEANG
DSSNTQATAAVVDCEACRMWSMVVDRCAVLGVPLPIIGNPAGGGGGGCTV
GVAGRVENGRAASTTVAATASGDGADEAVLPPAGKVLYNE*
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