prot_P-lacustris_contig950.15894.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig950.15894.1
Unique Nameprot_P-lacustris_contig950.15894.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length215
Homology
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 6.930e-120
Identity = 178/208 (85.58%), Postives = 186/208 (89.42%), Query Frame = 0
Query:    1 MKATKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEEGSLDPSGG 208
            MKAT VVWGALNEKLIVSY DG+IRTFDPYDGTELEYAQV               H++DINRLC+NKDRTLLLT SKDYTSKLLDANTLQVLKTY+TDRPVNA+VMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASG+EDGYVRLHFFDEDYLN QDEVPDELEEGS   +GG
Sbjct:  150 MKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV---------------HSQDINRLCINKDRTLLLTSSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGSEDGYVRLHFFDEDYLNMQDEVPDELEEGSKAAAGG 342          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA)

HSP 1 Score: 272 bits (695), Expect = 5.310e-88
Identity = 134/199 (67.34%), Postives = 161/199 (80.90%), Query Frame = 0
Query:    2 KATKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEE 200
            K T+V+W ALN++++ S+ DG+IR FDP  G  L      T T           H+K I+R+ L+ DRTLLLTCSKDYT+KLLDA+TL+VLK Y T+RPVNAAV+HPTK+H++LGGGQDAMSVTTT S VGKFE+RF+HMIYE EFGRVKGHFGPINALAINP+GLSY SGAEDGY+RLH FD +Y++KQDEVPDELEE
Sbjct:  151 KCTEVLWSALNDRILASFEDGTIRVFDPETGELLS-----TSTP----------HSKPISRMYLSTDRTLLLTCSKDYTAKLLDADTLEVLKVYPTERPVNAAVIHPTKDHILLGGGQDAMSVTTTGSRVGKFETRFYHMIYEEEFGRVKGHFGPINALAINPDGLSYCSGAEDGYIRLHHFDREYVDKQDEVPDELEE 334          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A7S2V5S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5S2_9STRA)

HSP 1 Score: 235 bits (600), Expect = 6.560e-76
Identity = 116/196 (59.18%), Postives = 145/196 (73.98%), Query Frame = 0
Query:    1 MKATKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPD 196
            +KATK+ W  LN+ ++  + DGS+RTFDP  G EL             C+P   VH   I     NK++TLLL+ S D T+KL+D  T  VLKTY+T+RPVNAAV+ P K+HV+LGGGQ+AMSVTTT S VGKFE+RF+H++YE EFGRVKGHFGPINAL INP+G SYASGAEDGY+RLH FD+ YL+ +D+VPD
Sbjct:    3 VKATKIGWLPLNKAILAGFEDGSLRTFDPKTGEELA------------CYP---VHTGVIKAFSFNKEKTLLLSSSADNTAKLVDVATFDVLKTYKTERPVNAAVISPIKDHVLLGGGQEAMSVTTTDSRVGKFETRFYHLVYEREFGRVKGHFGPINALGINPDGKSYASGAEDGYIRLHHFDQSYLDMEDDVPD 183          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A6U3VY90_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Thalassiosirales TaxID=33847 RepID=A0A6U3VY90_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.860e-74
Identity = 119/204 (58.33%), Postives = 148/204 (72.55%), Query Frame = 0
Query:    1 MKATKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEEGSLD 204
            + AT +VW  LNE L V++ +GSIR +DP  G EL+                +  H K INR+  N D+TL +T S D+T+KL D   L+ LKTY+TDRPVN AV+  TK+H++LGGGQ+AMSVTTTS  VGKFE+RFFH++YE EFG VKGHFGPINALAINPNG SYASGAEDGY+RLH+FD+ YL+ +D VP+ LEEG  D
Sbjct:  155 VNATNIVWLNLNEALFVTFDNGSIRLYDPATGEELDE---------------FYPHEKKINRVSFNSDKTLFITSSADFTAKLYDVVDLKHLKTYKTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGSVKGHFGPINALAINPNGRSYASGAEDGYIRLHYFDKSYLDMKDPVPEVLEEGEED 343          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A7S2I7B8_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I7B8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.010e-72
Identity = 119/205 (58.05%), Postives = 148/205 (72.20%), Query Frame = 0
Query:    4 TKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEEGSLDPSGG 208
            T +VW  LNE L V++ +GSIR +D   G ELE             FP    H K INR+  N+++TL +T S D+T+KL D   L  LKTY+T+RPVN AV+HPTK+H++LGGGQ+AMSVTTT  +VGKFE+RFFH++YE EFG+VKGHFGPINAL +NPNG SYASGAEDGYVRLHFFD+ YL+ +D VP E  EG  +  GG
Sbjct:  158 TNIVWLNLNEALFVTFDNGSIRLYDTVTGDELEEI-----------FP----HEKKINRVSFNQEKTLFITSSADFTAKLYDVVNLHHLKTYKTERPVNDAVIHPTKDHILLGGGQEAMSVTTTRGDVGKFETRFFHLVYEEEFGKVKGHFGPINALGVNPNGRSYASGAEDGYVRLHFFDKSYLDMKDPVP-EAPEGGEEEEGG 346          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.460e-72
Identity = 114/196 (58.16%), Postives = 144/196 (73.47%), Query Frame = 0
Query:    1 MKATKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPD 196
            + AT VVW  LNE + V++ +G IR +DP +G ELE  Q                H K INR+  N+++T+ +T S D+T+KL D   L+ LKTYQTDRPVN AV+ PTK+H++LGGGQ+AMSVTTT+  VGKFE+RFFH++YE EFG VKGHFGPINAL INPNGLSYASGAEDGY+RLHFFD+ Y+  +D VP+
Sbjct:  155 VNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELEEIQP---------------HEKKINRVSFNRNKTMFITSSADFTAKLYDVVELEHLKTYQTDRPVNDAVISPTKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGIVKGHFGPINALDINPNGLSYASGAEDGYIRLHFFDKSYIEMKDPVPE 335          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A7S4NJI3_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJI3_9STRA)

HSP 1 Score: 232 bits (592), Expect = 5.960e-72
Identity = 117/198 (59.09%), Postives = 145/198 (73.23%), Query Frame = 0
Query:    4 TKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEEG 201
            T +VW  LNE L V++ +G++R +DP  G ELE             FP    H K INR+  NKD+TL +T S D+TSKL D   L+ LKTY+TDRPVN AV+   K+H++LGGGQ+AMSVTTT+  VGKFE+RFFH++YE EFG VKGHFGPINAL INPNG +YASGAEDGYVRLHFFD+ YL+ +D VP+E E+G
Sbjct:  194 TNIVWLNLNEALFVTFDNGAVRLYDPVTGDELEEI-----------FP----HEKKINRVSFNKDKTLFITSSADFTSKLYDVVDLEHLKTYKTDRPVNDAVISEKKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGSVKGHFGPINALDINPNGRNYASGAEDGYVRLHFFDKSYLDMKDPVPEEPEDG 376          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A7S2RQ21_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RQ21_9STRA)

HSP 1 Score: 231 bits (588), Expect = 9.060e-72
Identity = 116/194 (59.79%), Postives = 143/194 (73.71%), Query Frame = 0
Query:    4 TKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDE 197
            T VV+  +NE L V++ +GSIR +DP  G ELE                +  H K INR+  N  +T+ +T S D+TSKL D   L+ LKTY+TDRP+N AV+  TK+H+ILGGGQ+AMSVTTTS  VGKFESRFFH++YE EFGRVKGHFGPINALAINPNGLSYASGAEDGY+RLHFFD+ Y++ +D VP+E
Sbjct:  156 TNVVFLNINEALFVTFDNGSIRLYDPVTGDELEE---------------FFAHEKKINRVSFNLKKTIFITSSADFTSKLYDVVDLKHLKTYKTDRPINDAVISETKDHIILGGGQEAMSVTTTSGKVGKFESRFFHLVYEEEFGRVKGHFGPINALAINPNGLSYASGAEDGYIRLHFFDKSYIDMKDPVPEE 334          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A1E7EXY2_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXY2_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.240e-70
Identity = 120/214 (56.07%), Postives = 152/214 (71.03%), Query Frame = 0
Query:    1 MKATKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEEGSLDPSGGGGDEDN 214
            ++ T + W ALNE L++++ +G +R ++P  GT  E  +V               H K INRL LN+ ++L +T S D+TSKL D   L+ LKTY TDRPVN AV+  TK+H++LGGGQ+AMSVTTTS  VGKFE+RFF ++YETEFG VKGHFGPINALAINPNG +YASGAEDGYVRLHFFD+ YL+ +D VP E  EG+ + S    DEDN
Sbjct:  155 VQMTNISWTALNEHLLIAFDNGIVRLYNPTTGTIEEEIRV---------------HDKKINRLQLNQSKSLFITSSADFTSKLYDTANLKHLKTYTTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGKVGKFETRFFELVYETEFGSVKGHFGPINALAINPNGRNYASGAEDGYVRLHFFDKSYLDMKDPVP-EAAEGTEELSTDDDDEDN 352          
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Match: A0A7S1DBX8_CYCTE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBX8_CYCTE)

HSP 1 Score: 227 bits (578), Expect = 2.910e-70
Identity = 113/198 (57.07%), Postives = 143/198 (72.22%), Query Frame = 0
Query:    4 TKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCFPLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEEG 201
            T + W  LNE L+V + +G+IR +DP+ G E+E                   H K INR+  N ++TL +T S D+TSKL D   ++  KTY+TDRPVN AV+  TK+H++LGGGQ+AMSVTTTS  VGKFE+RFFH++YE EFG VKGHFGPINALAINPNG S+ASGAEDGYVRLHFFD+ Y++ +D VP+E EEG
Sbjct:  157 TNIDWMPLNESLMVCFDNGTIRLYDPHTGDEMEEIVA---------------HDKKINRVRFNLEKTLFITSSADFTSKLFDVVDMKHHKTYKTDRPVNDAVLSETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGTVKGHFGPINALAINPNGRSFASGAEDGYVRLHFFDKSYIDMKDPVPEEPEEG 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig950.15894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMX5_9PHAE6.930e-12085.58Eukaryotic translation initiation factor 3 subunit... [more]
A0A835ZF13_9STRA5.310e-8867.34Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2V5S2_9STRA6.560e-7659.18Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6U3VY90_9STRA2.860e-7458.33Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2I7B8_9STRA1.010e-7258.05Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2NVM0_9STRA1.460e-7258.16Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4NJI3_9STRA5.960e-7259.09Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2RQ21_9STRA9.060e-7259.79Eukaryotic translation initiation factor 3 subunit... [more]
A0A1E7EXY2_9STRA2.240e-7056.07Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1DBX8_CYCTE2.910e-7057.07Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 88..126
e-value: 200.0
score: 2.5
coord: 45..85
e-value: 2.7
score: 14.3
coord: 143..182
e-value: 0.34
score: 19.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 150..180
e-value: 0.0072
score: 17.2
coord: 55..83
e-value: 0.21
score: 12.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 150..180
score: 9.339
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..202
e-value: 6.4E-51
score: 175.5
NoneNo IPR availablePANTHERPTHR19877WD40 REPEAT PROTEINcoord: 2..190
NoneNo IPR availablePANTHERPTHR19877:SF1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Icoord: 2..190
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 7..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig950contigP-lacustris_contig950:33076..36460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig950.15894.1mRNA_P-lacustris_contig950.15894.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig950 30205..36771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig950.15894.1 ID=prot_P-lacustris_contig950.15894.1|Name=mRNA_P-lacustris_contig950.15894.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=215bp
MKATKVVWGALNEKLIVSYVDGSIRTFDPYDGTELEYAQVQTRTTFNMCF
PLWQVHAKDINRLCLNKDRTLLLTCSKDYTSKLLDANTLQVLKTYQTDRP
VNAAVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRV
KGHFGPINALAINPNGLSYASGAEDGYVRLHFFDEDYLNKQDEVPDELEE
GSLDPSGGGGDEDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam