prot_P-lacustris_contig95.15883.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig95.15883.1
Unique Nameprot_P-lacustris_contig95.15883.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length257
Homology
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: D7FR51_ECTSI (DNA topoisomerase VI subunit B-like protein Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR51_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 6.950e-48
Identity = 87/94 (92.55%), Postives = 90/94 (95.74%), Query Frame = 0
Query:    1 MGKNSGEVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLFKAAGGKE 94
            MGK SGE VKSKSPAEFFADNQNIAGFDN GKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTE EFNEHRGMDNRDV+DAGLFKA+GGK+
Sbjct:    1 MGKGSGEAVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEEEFNEHRGMDNRDVVDAGLFKASGGKK 94          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A4D9CY99_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY99_9STRA)

HSP 1 Score: 129 bits (325), Expect = 5.020e-31
Identity = 63/93 (67.74%), Postives = 78/93 (83.87%), Query Frame = 0
Query:    3 KNSGEVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLFKAAGGKER 95
            KN  EVV+SK+PAEFF+++Q+I GFDNPG+SLYTT+RELVEN+LDAAESI ALPH+S+ IEE TE E NE RGM++R+ +D GLF  A GK R
Sbjct:    4 KNRIEVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIQALPHVSVVIEELTEDELNELRGMESRERVDLGLFHKATGKRR 96          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A7S3XXL4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXL4_HETAK)

HSP 1 Score: 125 bits (313), Expect = 3.350e-29
Identity = 60/81 (74.07%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    7 EVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLF 87
            EV K KSPAEFFA+NQNIAGFDNPGKSLYTTIRELVEN+LDAAESI  LP I L+IEE T  EFN+ RG D  +V+D+ LF
Sbjct:   88 EVAKQKSPAEFFAENQNIAGFDNPGKSLYTTIRELVENALDAAESINVLPEIHLSIEEMTTEEFNKFRGRDTNEVVDSDLF 168          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: W7U7C7_9STRA (Dna topoisomerase 6 subunit b n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7C7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 4.890e-29
Identity = 61/93 (65.59%), Postives = 77/93 (82.80%), Query Frame = 0
Query:    3 KNSGEVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLFKAAGGKER 95
            KN  EVV+SK+PAEFF+++Q+I GFDNPG+SLYTT+RELVEN+LDAAESI  LP++S+ IEE TE E NE RGM++R+ +D GLF  A GK R
Sbjct:    4 KNRIEVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIQELPYVSVVIEEITEDELNELRGMESRERVDLGLFHKATGKRR 96          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A059LQ65_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LQ65_9CHLO)

HSP 1 Score: 114 bits (285), Expect = 1.220e-27
Identity = 57/86 (66.28%), Postives = 67/86 (77.91%), Query Frame = 0
Query:    2 GKNSGEVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLF 87
            GK   E +  KSPAEFFA+N+NIAGFDNPGK LYTTIRELVEN+LD+AESI  LP IS+TIEE ++AE N  RG+ N D ID  L+
Sbjct:    7 GKKQSETLVQKSPAEFFAENKNIAGFDNPGKCLYTTIRELVENALDSAESICVLPDISITIEEVSQAELNTLRGIANVDRIDEALY 92          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A150FTZ9_GONPE (HATPase_c domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FTZ9_GONPE)

HSP 1 Score: 115 bits (287), Expect = 1.420e-27
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 0
Query:    7 EVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLFKAAGGKERRKRR 99
            + +  KSPAEFFA+N+NIAGFDNPGK LYTT+RELVEN+LDAAE+I  LPHI +TIEE ++A  N  RG+++ D +DA L++    +E RK+R
Sbjct:    8 DALVQKSPAEFFAENKNIAGFDNPGKCLYTTVRELVENALDAAEAISELPHIEITIEEVSKARLNRIRGLEHHDRLDAQLYQDFESEEARKKR 100          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A7S2TYK6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYK6_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 2.180e-27
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 0
Query:    9 VKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLFKAAGGKERRK 97
            +KSKSPAEFFA++QNIAGFDNPGKSLYTT+RE VENSLDAAESIG LP I L+IE+  +   NE RG  +R   D  L+++ G K+R+K
Sbjct:   25 LKSKSPAEFFAEHQNIAGFDNPGKSLYTTVREFVENSLDAAESIGVLPSIRLSIEQVDQDSLNELRGYKSRKRKDLSLYESGGSKKRKK 113          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A2D4C2G8_PYTIN (DNA topoisomerase VI, B subunit, variant n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2G8_PYTIN)

HSP 1 Score: 110 bits (275), Expect = 2.460e-27
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    6 GEVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLF 87
            GEV++ +SPAEFFA+NQNIAGFDNPGK LYTTIRELVEN+LDAAE+I  LP IS+TI E  EA FN  RG+ +   +D  L+
Sbjct:   10 GEVLQIRSPAEFFAENQNIAGFDNPGKCLYTTIRELVENALDAAEAIQTLPDISITITEMDEATFNAERGVASVKRVDHALY 91          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A0D2L4E2_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2L4E2_9CHLO)

HSP 1 Score: 112 bits (279), Expect = 1.990e-26
Identity = 53/93 (56.99%), Postives = 73/93 (78.49%), Query Frame = 0
Query:    7 EVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLFKAAGGKERRKRR 99
            + ++ KSPAEFFADN+NIAGFDNPGK LYTT+RELVEN+LD+AESI  LP I++T+EE ++A  N  RG+++ D ID  L++    ++ R+RR
Sbjct:    9 DELQQKSPAEFFADNKNIAGFDNPGKCLYTTVRELVENALDSAESISVLPEITITVEEVSKARLNRLRGVEHHDRIDEALYQDWESEDARRRR 101          
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Match: A0A453KJE1_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453KJE1_AEGTS)

HSP 1 Score: 110 bits (275), Expect = 3.400e-26
Identity = 51/80 (63.75%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    8 VVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLF 87
            ++K KSPAEFFA+N+NIAGFDNPGKSLYTT+RELVEN+LD+AESI  LP I +TIEE T+++FN   G+ +R+ +D  L+
Sbjct:   46 LLKQKSPAEFFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDIEITIEEITKSKFNTMIGLVDRERVDEALY 125          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig95.15883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR51_ECTSI6.950e-4892.55DNA topoisomerase VI subunit B-like protein Topois... [more]
A0A4D9CY99_9STRA5.020e-3167.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3XXL4_HETAK3.350e-2974.07Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7U7C7_9STRA4.890e-2965.59Dna topoisomerase 6 subunit b n=1 Tax=Nannochlorop... [more]
A0A059LQ65_9CHLO1.220e-2766.28Uncharacterized protein (Fragment) n=1 Tax=Helicos... [more]
A0A150FTZ9_GONPE1.420e-2759.14HATPase_c domain-containing protein n=1 Tax=Gonium... [more]
A0A7S2TYK6_9EUKA2.180e-2764.04Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A2D4C2G8_PYTIN2.460e-2765.85DNA topoisomerase VI, B subunit, variant n=1 Tax=P... [more]
A0A0D2L4E2_9CHLO1.990e-2656.99Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A453KJE1_AEGTS3.400e-2663.75Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 2..82
e-value: 4.5E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 7..72
IPR005734DNA topoisomerase VI, subunit BPANTHERPTHR10871:SF4DNA TOPOISOMERASE 6 SUBUNIT Bcoord: 7..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig95contigP-lacustris_contig95:176381..184654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig95.15883.1mRNA_P-lacustris_contig95.15883.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig95 176340..187854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig95.15883.1 ID=prot_P-lacustris_contig95.15883.1|Name=mRNA_P-lacustris_contig95.15883.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=257bp
MGKNSGEVVKSKSPAEFFADNQNIAGFDNPGKSLYTTIRELVENSLDAAE
SIGALPHISLTIEEFTEAEFNEHRGMDNRDVIDAGLFKAAGGKERRKRRA
RRLKQLPNRRYQKRLRMTTLWRLQLPLVVPLRPLTPKRKKDGPRETLCII
GSSARTMEWACPTTRFQKCLEWCYPAASTACDRLGASTAWVPRWLSFGPR
KAQGYLSRWCPAAVRTSKTLRVSSPSASWISTSTRTNRQFTSMPNCPIRR
AGGERR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf
IPR005734TopoVI_B