prot_P-lacustris_contig95.15879.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig95.15879.1
Unique Nameprot_P-lacustris_contig95.15879.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length125
Homology
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BLAST of mRNA_P-lacustris_contig95.15879.1 vs. uniprot
Match: D7FR48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR48_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 8.040e-42
Identity = 86/125 (68.80%), Postives = 97/125 (77.60%), Query Frame = 0 
Query:    1 DVAEKTIDSTSAACRERLEAALEQPAAGTLPPHCAAEVGRILDGTAKQNAGDGKPRRGGGSKSGTDAPTASSGKGSKNEKPKADGAHTATVVLTFVSLVLVAVLAVAFYVSGGPPKRGGKRLHRK 125
            DVAE+TI+STS+ACR RLE ALEQPA G+L   C AEVGRILD  A   AG GKPRRGG  KSGTDAPT SS  GSKNE+ +  G   ATVVLTFVSLVLVAV+A+A+  S G PKRGG+RLH+K
Sbjct:    5 DVAERTIESTSSACRYRLEEALEQPA-GSLSAACEAEVGRILDAKAHHKAGAGKPRRGG-DKSGTDAPTKSSRTGSKNEQTEDHGTQAATVVLTFVSLVLVAVVALAYCASVGRPKRGGRRLHKK 127
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig95.15879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR48_ECTSI8.040e-4268.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 91..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig95contigP-lacustris_contig95:153743..155165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig95.15879.1mRNA_P-lacustris_contig95.15879.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig95 153743..155165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig95.15879.1 ID=prot_P-lacustris_contig95.15879.1|Name=mRNA_P-lacustris_contig95.15879.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=125bp
DVAEKTIDSTSAACRERLEAALEQPAAGTLPPHCAAEVGRILDGTAKQNA
GDGKPRRGGGSKSGTDAPTASSGKGSKNEKPKADGAHTATVVLTFVSLVL
VAVLAVAFYVSGGPPKRGGKRLHRK
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