prot_P-lacustris_contig95.15877.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig95.15877.1
Unique Nameprot_P-lacustris_contig95.15877.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length198
Homology
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BLAST of mRNA_P-lacustris_contig95.15877.1 vs. uniprot
Match: D7FR44_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR44_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 8.860e-55
Identity = 130/186 (69.89%), Postives = 153/186 (82.26%), Query Frame = 0 
Query:    1 MTTLDSDEIAFVRSLFKDGDVKSDGRIGIAEVLACLEKMDYIMEGSPEDLIRSVVPAAVEVDRFSLNDTIKVATAAKAQDQGPGAPKAPGICRDDSLAELERSFNKQLMLGHLKGDVIEEEPTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVEGPDGLENGDAPPSRPTVGLDIPKRRRTIA 186
            M TLDSDE+ FVR  FKDGDVKSDGRI +A+++ACL++MD+I+EGSP+DLIRSVVPAA++VDR SLND IKVATAAK Q+QG   P+ PGI R+ SLAELE SFNK++MLG +  D IEEEP   S  XXXXXXXXXXXXXXXXXXXXXXXXXXIVEGP G+E+   PP+   VGL +P RRR+IA
Sbjct:  138 MATLDSDELDFVRRQFKDGDVKSDGRINVAKLMACLKQMDFILEGSPKDLIRSVVPAAMDVDRLSLNDAIKVATAAKTQEQGSAPPQRPGIGREGSLAELESSFNKRIMLGEITADAIEEEPRVPSVGXXXXXXXXXXXXXXXXXXXXXXXXXXIVEGPAGIESAP-PPAVAAVGLAVPVRRRSIA 322
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BLAST of mRNA_P-lacustris_contig95.15877.1 vs. uniprot
Match: A0A6H5L292_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L292_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.280e-32
Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = 0 
Query:   39 MDYIMEGSPEDLIRSVVPAAVEVDRFSLNDTIKVATAAKAQDQGPGAPKAPGICRDDSLAELERSFNKQLMLGHLKGDVIEEEPTAAS 126
            MD+I+EGSPEDLIRSVVPAA++VDR SLND IKVATAAK Q+QG   P+ PGI R+ SLAELE SFNKQ+MLG +  D IEEEP   S
Sbjct:    1 MDFILEGSPEDLIRSVVPAAMDVDRLSLNDAIKVATAAKTQEQGSAPPQRPGIGREGSLAELESSFNKQIMLGEITADAIEEEPRVPS 88
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig95.15877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR44_ECTSI8.860e-5569.89EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L292_9PHAE2.280e-3270.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 7..42
score: 9.409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig95contigP-lacustris_contig95:120286..130929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig95.15877.1mRNA_P-lacustris_contig95.15877.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig95 120256..139697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig95.15877.1 ID=prot_P-lacustris_contig95.15877.1|Name=mRNA_P-lacustris_contig95.15877.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=198bp
MTTLDSDEIAFVRSLFKDGDVKSDGRIGIAEVLACLEKMDYIMEGSPEDL
IRSVVPAAVEVDRFSLNDTIKVATAAKAQDQGPGAPKAPGICRDDSLAEL
ERSFNKQLMLGHLKGDVIEEEPTAASPGLGREDSLAQLESSFHKQVLSGH
IPAAIVEGPDGLENGDAPPSRPTVGLDIPKRRRTIAECTRTRPHPPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom