prot_P-lacustris_contig949.15865.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig949.15865.1
Unique Nameprot_P-lacustris_contig949.15865.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length758
Homology
BLAST of mRNA_P-lacustris_contig949.15865.1 vs. uniprot
Match: D7FQL0_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQL0_ECTSI)

HSP 1 Score: 605 bits (1559), Expect = 2.820e-203
Identity = 383/718 (53.34%), Postives = 454/718 (63.23%), Query Frame = 0
Query:   40 EEGEEDDEADSNAGDDDGWPSPREKVPRVRRHPST-LQQSLPT-SPAERRRPYQTLHCVHD--DEEKQERDDVNNAPSCSSESACSGTSSDEEEIKSCKDGLGDRETGTMIIFERHRGDGDHDGDDALVAAPVHAASSYFLTPELQSPYLGNHEQAGKAPSSSAAMVSRNTASNDGNRHAFASSDACPQQIAV---RNSI---SSQHRHHSSTAVHEPRARCGCRGLTVRVDSGPLGLSLEASYQMEQGFLLKQAWSDCVADRGMFTHSVHVRNLPRKKEDGHVNALDLGLEGRSSWSGLVKVRTVGLESDDSTATPGRNGKKNVLVGPSSPRRPGVLPAEKPRSRNGILEVDEGDILVRVNNVQVTKKSFTEVTSLLDQGERPTRLTFIRHGCGRRFVGREKGSGGGGTYSGTTAPATQQESPCRATLSGGWVGCCGRVGKSGCGCEHPPSTASARPPVSNSSPQKPNKWYTQIEAEADGCPVAALLRARRQLRSGGMEQWHEVVASRGRLWQRLLKNLSPDSHSDRAKLRKLTGCSRSLDEHALQGITGISKRKLTSDYQRLISRRKVGRKGGGVDGTGEANRALAARVWKDVNRTMSPRRHGGRPGYFSVSQLGGGGHVCPAYFAGASRHAVFRVAYATASTLQFVSGMSYMAAVMLVQEPVEAMAYATLVTLLQKRVMQALFPLGDVDLLDAYHLCGGRVVTFRASGAARARHP 747
            EEG+EDD   S+ GD + W  P ++V R R++ S  L+Q+LPT SP + R   QT +C +   DEE+  RDD N+  S +SES  SGT + +EE +S ++ +   +TG  I+ ER  G    DGD ALVAAPVHA+S     P    P   + EQAGKA SSS  M+  +T S        A     PQ +AV   RNS    SSQH+H SSTA+HEPRARCGCRGLTVR+DSGPLGLSLEASY++ +  +LKQAWSDC AD GMF HS+ V N P K +D  V  LDLGL+GRSS SGL+KVR VGLE + +T T     + ++L G  SP      P E   S  G+LE+DEGDILVRV+NVQVTKKSFTEV SLLDQ ERPTRLTF+RH CGRRFVGR+ G GGGGT  G    A + + PCR    GGW GCCG +GKSGCG + PP+ +     VS+ SP+        IE EADGCPVA +LRARRQLRSGGMEQWHE+VASRG LWQRLL+NLSPDSHSDR+                                                                                       GGGGHVCPA+FAG ++HAVFRVA+ATASTLQFVSG+SYMAA++LVQEP+EAMAYATLVTLLQ+RVMQALFPLGDVDLLDAYHLCGGRVVTFRA GAAR+  P
Sbjct:    9 EEGKEDD---SDEGDHETW-FPGKRVSRTRQYSSCILRQALPTTSPIKLRHCPQTSNCNYGEADEEQGFRDDNNSTHSYTSESTRSGTCNSDEEPESKRENIWGGDTGATIMVER--GQHGDDGDIALVAAPVHASSPLLSLPGPPGPR--SREQAGKASSSSTVMIRDHTFSVSPQARDSAPLSLSPQPVAVFRSRNSNYTRSSQHKH-SSTAIHEPRARCGCRGLTVRIDSGPLGLSLEASYRVGETIVLKQAWSDCAADSGMFAHSMLVSNFPGKVDDDQVRVLDLGLDGRSSSSGLIKVRAVGLERNHATTTV-HTRQGSMLNGAPSP------PNESRGSVVGVLELDEGDILVRVDNVQVTKKSFTEVASLLDQAERPTRLTFVRHACGRRFVGRDNGYGGGGTCRG----AARHKPPCRVAYCGGWDGCCGMMGKSGCGGKQPPNASCVGRVVSSPSPK--------IETEADGCPVAVILRARRQLRSGGMEQWHELVASRGHLWQRLLRNLSPDSHSDRS---------------------------------------------------------------------------------------GGGGHVCPAHFAGGAKHAVFRVAFATASTLQFVSGISYMAALVLVQEPLEAMAYATLVTLLQERVMQALFPLGDVDLLDAYHLCGGRVVTFRAFGAARSPTP 611          
BLAST of mRNA_P-lacustris_contig949.15865.1 vs. uniprot
Match: A0A6H5L6Q0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q0_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 7.630e-196
Identity = 385/727 (52.96%), Postives = 450/727 (61.90%), Query Frame = 0
Query:   40 EEGEEDDEADSNAGDDDGWPSPREKVPRVRRHPST-LQQSLPT-SPAERRRPYQTLHCVHD-DEEKQERDDVNNAPSCSSESACSGTSSDEEEIKSCKDGLGDRETGTMIIFERHRGDGDHDGDDALVAAPVHAASSYFLTPELQSPYLGNHEQAGKAPSSSAAMVSRNTASNDGNRHAFASSDACPQQIAV---RNSI---SSQHRHHSSTAVHEPRARCGCRGLTVRVDSGPLGLSLEASYQMEQGFLLKQAWSDCVADRGMFTHSVHVRNLPRKKEDGHVNALDLGLEGRSSWSGLVKVRTVGLESDDSTATPGRNGKKNVLVGPSSPRRPGVLPAEKPRSRNGILEVDEGDILVRVNNVQVTKKSFTEVTSLLDQGERPTRLTFIRHGCGRRFVGREKGSGGGGTYSGTTAPATQQESPCRATLSGGWVGCCGRVGKSGCGCEHPPSTASARPPVSNSSPQKPNKWYTQIEAEADGCPVAALLRARRQLRSGGMEQWHEVVASRGRLWQRLLKNLSPDSHSDRAKLRKLTGCSRSLDEHALQGITGISKRKLTSDYQRLISRRKVGRKGGGVDGTGEANRALAARVWKDVNRTMSPRRHGGRPGYFSVSQLGGGGHVCPAYFAGASRHAVFRVAYATASTLQFVSGMSYMAAVMLVQEPVEAMAYATLVTLLQKRVMQALFPLGDVDLLDAYHLCGGRVVTFRASGAARARHPPKLLP-GEEG 756
            EEG+ED    S+ GD + W SP ++V R R + S  L+Q+LPT SP + R   QT +C  + DEE+  R+D +   + S +S CSGT S +EE  S +  +   +TG  I+ ER +  GD DGD ALVAAPVHA+S     P   SP   + +QAGK   SSA M   +T S        A     PQ +AV   RNS    +SQ  HHSSTA+HEPRARCGCRGLTVRVDSGPLGLSLEASY++ +  +LKQAWSDC AD GMF HS+ V N+P K +D     LD  L+GR S SGL+KVR VGLE D +T T  R  + N+L G  SP      P+E      G+LE+DEGDILVRV+NVQ    S                                                                 C GR+                   VS+ SP+        IE EADGCPVA +LRARRQLRSGGMEQW+E VASR RLWQRLL+NLSPDSHSDRAKLRKL  CSRS D HAL+G+    K KL ++YQRLIS RK  RK    DG  +A RALAA+VWKDVNRTMSPRRHG RPG+FS SQLGGGGHVCPA+FAG S+HAVFRVA+ATASTLQFVSGMSYMAA++LVQEPVEAMAYATLVTLLQ     ALFPLGDVDLLDAYHLCGGRVVTFRA GAAR+  P +    GE G
Sbjct:    9 EEGKEDS---SDEGDHETW-SPGKRVSRTRHYSSCILRQALPTTSPIKLRHCQQTSNCNGEPDEEQDSRNDNSTHSNTSEQSTCSGTYSSDEEPASRRKNIWGGDTGATIMAERGQHHGD-DGDIALVAAPVHASSPLLSLPGPPSPR--SRKQAGKVLGSSAVMNRDHTLSVSSQARDPAPLSPSPQPVAVFRSRNSNYTPTSQPNHHSSTAIHEPRARCGCRGLTVRVDSGPLGLSLEASYRVGETLVLKQAWSDCAADSGMFAHSMLVSNVPGKVDDDQARVLDPWLDGRLSSSGLIKVRAVGLERDHATMTV-RTRQGNILNGAPSP------PSESRGRVVGVLELDEGDILVRVDNVQPPNAS-----------------------------------------------------------------CVGRL-------------------VSSPSPK--------IETEADGCPVAVILRARRQLRSGGMEQWYEAVASRRRLWQRLLRNLSPDSHSDRAKLRKLVVCSRSADGHALKGLV---KCKLRNNYQRLISSRKGLRKSSNTDGCNKAKRALAAKVWKDVNRTMSPRRHGARPGFFSASQLGGGGHVCPAHFAGGSKHAVFRVAFATASTLQFVSGMSYMAALVLVQEPVEAMAYATLVTLLQ-----ALFPLGDVDLLDAYHLCGGRVVTFRAFGAARSPTPSEAAARGESG 621          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig949.15865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQL0_ECTSI2.820e-20353.34Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L6Q0_9PHAE7.630e-19652.96Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig949contigP-lacustris_contig949:51284..56799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig949.15865.1mRNA_P-lacustris_contig949.15865.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig949 49364..56805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig949.15865.1 ID=prot_P-lacustris_contig949.15865.1|Name=mRNA_P-lacustris_contig949.15865.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=758bp
MGLHVQWADEEEARAVVDQWKPVGHDKNNSSILLSNDSWEEGEEDDEADS
NAGDDDGWPSPREKVPRVRRHPSTLQQSLPTSPAERRRPYQTLHCVHDDE
EKQERDDVNNAPSCSSESACSGTSSDEEEIKSCKDGLGDRETGTMIIFER
HRGDGDHDGDDALVAAPVHAASSYFLTPELQSPYLGNHEQAGKAPSSSAA
MVSRNTASNDGNRHAFASSDACPQQIAVRNSISSQHRHHSSTAVHEPRAR
CGCRGLTVRVDSGPLGLSLEASYQMEQGFLLKQAWSDCVADRGMFTHSVH
VRNLPRKKEDGHVNALDLGLEGRSSWSGLVKVRTVGLESDDSTATPGRNG
KKNVLVGPSSPRRPGVLPAEKPRSRNGILEVDEGDILVRVNNVQVTKKSF
TEVTSLLDQGERPTRLTFIRHGCGRRFVGREKGSGGGGTYSGTTAPATQQ
ESPCRATLSGGWVGCCGRVGKSGCGCEHPPSTASARPPVSNSSPQKPNKW
YTQIEAEADGCPVAALLRARRQLRSGGMEQWHEVVASRGRLWQRLLKNLS
PDSHSDRAKLRKLTGCSRSLDEHALQGITGISKRKLTSDYQRLISRRKVG
RKGGGVDGTGEANRALAARVWKDVNRTMSPRRHGGRPGYFSVSQLGGGGH
VCPAYFAGASRHAVFRVAYATASTLQFVSGMSYMAAVMLVQEPVEAMAYA
TLVTLLQKRVMQALFPLGDVDLLDAYHLCGGRVVTFRASGAARARHPPKL
LPGEEGW*
back to top