prot_P-lacustris_contig948.15857.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig948.15857.1
Unique Nameprot_P-lacustris_contig948.15857.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length258
Homology
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: D8LGR2_ECTSI (Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR2_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.250e-119
Identity = 188/275 (68.36%), Postives = 213/275 (77.45%), Query Frame = 0
Query:    1 MRVQLRPREEYGTRRTRKIRMAGKVPGVVYSNSNT-------SVGGGRRMDEPILVKVDKIVLDREIRRLGASFDNTVYELVIEGAISVEQDAAAADKATGIDITVGDKGAGDGQ-------VQGGEA--EGDAPQ----PERRELVLANQTRLHPVFRTLLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRKIFESEEESAED 255
            MRVQ+RPR EYG+R  R+IR AGKVPGVVYSNS+          G GR  D+PILVKVDKIVLDRE+RRL ASFDNTVY+LVIEG  S   DAA      GI++TV D GAG  +       V  GE   EG        PERRELVLANQ+RLHPVFRTLLSVNWIRYKAGR+YPIP+KFIN+DLN+NFRKGAYIRRLKTHQHI+LP+DPE VPKWLY+DLEFVRSGSKLRVSDL+MPEGI LHR +EP  WNE+VCTIKGRK+F S + + +D
Sbjct:   13 MRVQVRPRGEYGSRGARRIRRAGKVPGVVYSNSDNRGHSSRPGGGVGRPADDPILVKVDKIVLDREVRRLNASFDNTVYDLVIEGETSSGDDAAD----DGIEVTVTDPGAGGDRGKEEEEGVSAGEGGVEGXXXXXXXXPERRELVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINSDLNENFRKGAYIRRLKTHQHILLPEDPEMVPKWLYLDLEFVRSGSKLRVSDLMMPEGILLHRANEPGMWNEVVCTIKGRKVFASGDSAGDD 283          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: A0A485LRJ8_9STRA (Aste57867_24188 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRJ8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.010e-8
Identity = 35/118 (29.66%), Postives = 61/118 (51.69%), Query Frame = 0
Query:  127 VLANQTRLHPVFRTLLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRK 244
            VL     LHPV    L+VN++RYK GR+  IPL ++N + +   ++G YI  ++    I      E++P  L+VD+  +  G ++ + ++  PEG+             +V TI G++
Sbjct:  105 VLLRDVTLHPVTDVPLTVNFLRYKPGRKVHIPLDYLNTEGSPGLKRGGYINNVR--HDIPCTIASEEIPAKLFVDVNGMHVGERIYLENITFPEGVT-----PLVKAKSVVATIAGKR 215          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: A0A3R6YZB1_9STRA (Ribosomal_TL5_C domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YZB1_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.540e-8
Identity = 36/118 (30.51%), Postives = 58/118 (49.15%), Query Frame = 0
Query:  127 VLANQTRLHPVFRTLLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRK 244
            VL     LHPV     SVN++RYK GR+  IPL F+N + +   ++G YI  +  +  I      E +P  L+VD+  +  G ++ + D+  PE +             +V TI G++
Sbjct:  103 VLLRDATLHPVTDVPQSVNFLRYKPGRKVHIPLDFLNQESSPGLKRGGYINNV--YHEIPCTIASEAIPTKLFVDVNGMHVGQRIYLEDITFPEHVT-----PLVKAKAVVATIAGKR 213          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: F0WKB2_9STRA (50S ribosomal protein L25 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKB2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.450e-8
Identity = 40/130 (30.77%), Postives = 69/130 (53.08%), Query Frame = 0
Query:  126 LVLANQTRLHPVFRTLLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRKIFESEEESAED 255
            L +    + HPV    L+VN+IRYK GR+  IP+ +IN + +   ++G YI  +  +  +    + E+VPK L +D+  +   SK  +  +  P+G+       PA    ++  +KGR+I  +  E+AED
Sbjct:  113 LAIMRDVQFHPVTDIPLTVNFIRYKNGRKVSIPITYINEEGSPGIKRGGYINHI--YHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETISFPDGVV---PVVPA--GTLLANLKGRRIL-TLPEAAED 234          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: A0A397C844_9STRA (Ribosomal_TL5_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C844_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.460e-8
Identity = 37/118 (31.36%), Postives = 59/118 (50.00%), Query Frame = 0
Query:  127 VLANQTRLHPVFRTLLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRK 244
            VL     LHPV     SVN++RYK GR+  IPL F+N + +   ++G YI  +  +  I      E +P  LYVD+  +  G ++ + ++  PE +      E      +V TI G++
Sbjct:  104 VLLRDATLHPVTDIPQSVNFLRYKPGRKVHIPLDFLNQEGSPGLKRGGYINNV--YHEIPCTIASEVIPAKLYVDVNGMHVGERIYLENITFPEHVTPLVKPES-----VVATIAGKR 214          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: A0A024G2B8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2B8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.540e-7
Identity = 42/137 (30.66%), Postives = 67/137 (48.91%), Query Frame = 0
Query:  126 LVLANQTRLHPVFRTLLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPAT-WNEIVCTIKGRKI------FESEEESAED 255
            L +    + HPV    L+VN+IRYK GR+  IP+ +IN + +   ++G YI  +       +  D  +VPK L +D+  +   SK  +  +  P+GI       PA     ++  IKGR+I       E +EE  E+
Sbjct:  825 LAIMRDVQFHPVTDLPLTVNFIRYKHGRKVSIPITYINEEGSPGLKRGGYINHICHEVECYVNTD--QVPKTLEIDVNGLDVDSKFFLETISFPDGI------VPAVPAGTLLANIKGRRIQALPEVLEDDEEELEE 953          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: A0A6G0XNP1_9STRA (Ribosomal_TL5_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNP1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.710e-7
Identity = 38/127 (29.92%), Postives = 67/127 (52.76%), Query Frame = 0
Query:  127 VLANQTRLHPVFRTLLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRK--IFESEEE 251
            VL     L PV    L+VN++RYK GR+  IPL ++N + +   ++G YI  ++    I      E++P  LYVD+  +  G ++ + ++  PE ++    ++      +V TI G++  I + EEE
Sbjct:  109 VLLRDVTLDPVTDVPLTVNFLRYKPGRKVYIPLDYLNMEGSPGLKRGGYINNVR--HEIPCTISSEEIPAKLYVDVNGMHVGERIYLENITFPEHVKPLIKEKS-----VVATIAGKRGLIQKPEEE 228          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: A0A482RSQ9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSQ9_9ARCH)

HSP 1 Score: 53.5 bits (127), Expect = 9.490e-6
Identity = 31/104 (29.81%), Postives = 56/104 (53.85%), Query Frame = 0
Query:  141 LLSVNWIRYKAGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRK 244
            +LSVN++RY+AG    IP++    D + + ++G Y+  +K     ++ +    VP+ L +DL     G   RV++L +P  +R  RG++    + +V  IK  K
Sbjct:    5 ILSVNFLRYRAGVSLRIPIELRAADQSPDIKRGGYVVPVKPFLSCVVQEGAA-VPRSLPLDLSGALKGQVFRVANLSLPPCVRPARGEDG---DRVVAVIKAAK 104          
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Match: A0A3M1V8I9_9GAMM (50S ribosomal protein L25 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1V8I9_9GAMM)

HSP 1 Score: 53.9 bits (128), Expect = 4.280e-5
Identity = 36/128 (28.12%), Postives = 64/128 (50.00%), Query Frame = 0
Query:  135 HPVFRTLLSVNWIRYKAGR--RYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYVDLEFVRSGSKLRVSDLLMPEGIRL---HRGDEPATWNEIVCTIKGRKIFESEEESAEDGK 257
            HP    +L V++ R  A +  R  +PL F+N +     + G  +  +     ++   + EK+P+++ VDL  +  G  L +SDL +PEG++L     GDE    +  V +I  +    +EE + E G+
Sbjct:   83 HPAKPFILHVDFQRVSAHQEIRMTVPLHFVNEEKAPGVKAGGEVSHMLADVEVLC--EAEKLPEYIEVDLGGMEVGDMLHLSDLKLPEGVKLAALSHGDESE--DAAVVSIHAKSAGAAEEAAPEGGE 206          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig948.15857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LGR2_ECTSI1.250e-11968.36Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus... [more]
A0A485LRJ8_9STRA1.010e-829.66Aste57867_24188 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R6YZB1_9STRA2.540e-830.51Ribosomal_TL5_C domain-containing protein n=2 Tax=... [more]
F0WKB2_9STRA5.450e-830.7750S ribosomal protein L25 putative n=1 Tax=Albugo ... [more]
A0A397C844_9STRA6.460e-831.36Ribosomal_TL5_C domain-containing protein n=4 Tax=... [more]
A0A024G2B8_9STRA1.540e-730.66Cleavage and polyadenylation specificity factor su... [more]
A0A6G0XNP1_9STRA1.710e-729.92Ribosomal_TL5_C domain-containing protein n=1 Tax=... [more]
A0A482RSQ9_9ARCH9.490e-629.81Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A3M1V8I9_9GAMM4.280e-528.1350S ribosomal protein L25 n=1 Tax=Gammaproteobacte... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029751Ribosomal protein L25PFAMPF01386Ribosomal_L25pcoord: 5..78
e-value: 8.2E-8
score: 32.7
NoneNo IPR availablePANTHERPTHR33284FAMILY NOT NAMEDcoord: 3..248
NoneNo IPR availablePANTHERPTHR33284:SF1RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 3..248
NoneNo IPR availablePRODOMPD012503coord: 3..78
e-value: 0.002
score: 99.0
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 3..78
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 123..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig948contigP-lacustris_contig948:15445..22618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig948.15857.1mRNA_P-lacustris_contig948.15857.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig948 14491..23068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig948.15857.1 ID=prot_P-lacustris_contig948.15857.1|Name=mRNA_P-lacustris_contig948.15857.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=258bp
MRVQLRPREEYGTRRTRKIRMAGKVPGVVYSNSNTSVGGGRRMDEPILVK
VDKIVLDREIRRLGASFDNTVYELVIEGAISVEQDAAAADKATGIDITVG
DKGAGDGQVQGGEAEGDAPQPERRELVLANQTRLHPVFRTLLSVNWIRYK
AGRRYPIPLKFINNDLNDNFRKGAYIRRLKTHQHIILPDDPEKVPKWLYV
DLEFVRSGSKLRVSDLLMPEGIRLHRGDEPATWNEIVCTIKGRKIFESEE
ESAEDGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029751Ribosomal_L25
IPR011035Ribosomal_L25/Gln-tRNA_synth