prot_P-lacustris_contig946.15847.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig946.15847.1
Unique Nameprot_P-lacustris_contig946.15847.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length127
Homology
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BLAST of mRNA_P-lacustris_contig946.15847.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 3.010e-64
Identity = 107/125 (85.60%), Postives = 115/125 (92.00%), Query Frame = 0 
Query:    1 MKSEQSSSERGLHLLVTQFLNLVTGEHDRSELFWREHVTTGVCQRFGTVALTESERAGLWKVCSDRPEILLAIVKKLVDVTGVRFKESVNKKLRSSKAKAIVVKFEFKVADIRDIEAVVTPMRIY 125
            MKSEQSSSERG+HLLVTQFLNLVTG H+RS LFWRE+VTTGVCQRFGTVALTESERAGLW VCSDRPEILL IVK+LV VTGVRFKESVN+KLRS KAK++VV FEF + DIRDIEAVVTPM IY
Sbjct:  332 MKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIY 456
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BLAST of mRNA_P-lacustris_contig946.15847.1 vs. uniprot
Match: A0A7S2RNV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNV0_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.460e-8
Identity = 46/134 (34.33%), Postives = 65/134 (48.51%), Query Frame = 0 
Query:    1 MKSEQSSSERGLHLLVTQFLNLVTGEHDRSELFWREHVTTGVCQRFGTVALTESERA---GLWKVCSDRPEI-------LLAIVKKLVDVTGVRFKESVNKKLRSSKAKAIVVKFEFKVADIRDIEAVVTPMRI 124
            M++ +SSS  G+ LLV QFLNL++G H  S +FW E +  G+  RFG   L   ER    G   V +   E        L  +V +L ++TG+ F   V     S      V  +EF   DI +++ VV  M I
Sbjct:  175 MRANRSSSWHGMSLLVAQFLNLISGSHPSSRVFWGEALLEGMVNRFGECCLFPEERLPAEGQEGVMTWESEFRRGGSSRLKDLVFRLAELTGIVFSSQVKSDFDSDPD--AVNGYEFLAQDIEELKPVVKYMHI 306
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig946.15847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9G7_ECTSI3.010e-6485.60Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2RNV0_9STRA1.460e-834.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig946contigP-lacustris_contig946:35873..38326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig946.15847.1mRNA_P-lacustris_contig946.15847.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig946 17180..40344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig946.15847.1 ID=prot_P-lacustris_contig946.15847.1|Name=mRNA_P-lacustris_contig946.15847.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=127bp
MKSEQSSSERGLHLLVTQFLNLVTGEHDRSELFWREHVTTGVCQRFGTVA
LTESERAGLWKVCSDRPEILLAIVKKLVDVTGVRFKESVNKKLRSSKAKA
IVVKFEFKVADIRDIEAVVTPMRIYP*
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