prot_P-lacustris_contig944.15837.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig944.15837.1
Unique Nameprot_P-lacustris_contig944.15837.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length196
Homology
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BLAST of mRNA_P-lacustris_contig944.15837.1 vs. uniprot
Match: A0A6H5K524_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K524_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.130e-59
Identity = 107/148 (72.30%), Postives = 120/148 (81.08%), Query Frame = 0 
Query:    5 QGQHQHPPLHRRGVMDTMTRSSTFSAPNQEAVERFLPPKLTEEEAENLFVAVIEAWSSLRASLGASRRARLVQLPIAVAAVRHGVQTVLCSCYPFLDTKGGRDGKRLLASLHEEVTARFIPRFYYEGPFTPVAEEEKEDAINMTKFAA 152
            QG HQHP L +         S+    P QEA +R L P+L  +EAE+LFVAV+E+WSSLR+SLGASR+ARLV LPIAVAAVRHGVQTVLC+CYPFLDTKGGR+GKRLLASLHEEV  RFIPRFYYEGPFTPVAEEEKEDA NM+  AA
Sbjct:  507 QGPHQHPSLSKEDARSLAATSNRALVPPQEAGKRQLRPELASDEAESLFVAVVESWSSLRSSLGASRQARLVHLPIAVAAVRHGVQTVLCNCYPFLDTKGGREGKRLLASLHEEVATRFIPRFYYEGPFTPVAEEEKEDAENMSHLAA 654
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig944.15837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K524_9PHAE1.130e-5972.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig944contigP-lacustris_contig944:56607..59199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig944.15837.1mRNA_P-lacustris_contig944.15837.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig944 56606..59199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig944.15837.1 ID=prot_P-lacustris_contig944.15837.1|Name=mRNA_P-lacustris_contig944.15837.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=196bp
GRRGQGQHQHPPLHRRGVMDTMTRSSTFSAPNQEAVERFLPPKLTEEEAE
NLFVAVIEAWSSLRASLGASRRARLVQLPIAVAAVRHGVQTVLCSCYPFL
DTKGGRDGKRLLASLHEEVTARFIPRFYYEGPFTPVAEEEKEDAINMTKF
AASTLAGGGGGGASSSPLQRENEVFGYFVTITPFEFAVVRKKKTLS
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